Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 RNU6-797P-201ENST00000363101 109 ntBASIC-2.38□□□□□ -2.79
TRAV1-1A0A0B4J248 SNORD116-14-201ENST00000383894 92 ntBASIC-2.38□□□□□ -2.79
TRAV1-1A0A0B4J248 SNORD116-17-201ENST00000383929 92 ntBASIC-2.38□□□□□ -2.79
TRAV1-1A0A0B4J248 SNORD116-15-201ENST00000384445 92 ntBASIC-2.38□□□□□ -2.79
TRAV1-1A0A0B4J248 Y_RNA.506-201ENST00000384494 102 ntBASIC-2.38□□□□□ -2.79
TRAV1-1A0A0B4J248 SNORD116-19-201ENST00000384729 92 ntBASIC-2.38□□□□□ -2.79
TRAV1-1A0A0B4J248 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-2.38□□□□□ -2.79
TRAV1-1A0A0B4J248 Y_RNA.544-201ENST00000384650 113 ntBASIC-2.39□□□□□ -2.79
TRAV1-1A0A0B4J248 RNU6-327P-201ENST00000516270 127 ntBASIC-2.39□□□□□ -2.79
TRAV1-1A0A0B4J248 RNU6-68P-201ENST00000516576 104 ntBASIC-2.39□□□□□ -2.79
TRAV1-1A0A0B4J248 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-2.39□□□□□ -2.79
TRAV1-1A0A0B4J248 SNORA63-201ENST00000363450 132 ntBASIC-2.4□□□□□ -2.79
TRAV1-1A0A0B4J248 RNU6-361P-201ENST00000364454 107 ntBASIC-2.4□□□□□ -2.79
TRAV1-1A0A0B4J248 Y_RNA.513-201ENST00000384522 100 ntBASIC-2.4□□□□□ -2.79
TRAV1-1A0A0B4J248 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.4□□□□□ -2.79
TRAV1-1A0A0B4J248 RNU6-1241P-201ENST00000384536 107 ntBASIC-2.41□□□□□ -2.8
TRAV1-1A0A0B4J248 RNU6-530P-201ENST00000391180 107 ntBASIC-2.41□□□□□ -2.8
TRAV1-1A0A0B4J248 MIR548AJ2-201ENST00000408539 92 ntBASIC-2.41□□□□□ -2.8
TRAV1-1A0A0B4J248 MIR7110-201ENST00000612638 86 ntBASIC-2.41□□□□□ -2.8
TRAV1-1A0A0B4J248 RNU6-231P-201ENST00000517122 103 ntBASIC-2.42□□□□□ -2.8
TRAV1-1A0A0B4J248 RNU6-92P-201ENST00000605893 104 ntBASIC-2.42□□□□□ -2.8
TRAV1-1A0A0B4J248 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-2.42□□□□□ -2.8
TRAV1-1A0A0B4J248 SNX3P1Y-201ENST00000615757 176 ntBASIC-2.42□□□□□ -2.8
TRAV1-1A0A0B4J248 MALAT1.1-201ENST00000618249 95 ntBASIC-2.42□□□□□ -2.8
TRAV1-1A0A0B4J248 RNU6-255P-201ENST00000516957 105 ntBASIC-2.43□□□□□ -2.8
TRAV1-1A0A0B4J248 AC006160.2-201ENST00000637708 154 ntBASIC-2.43□□□□□ -2.8
TRAV1-1A0A0B4J248 SNORD60.1-201ENST00000362451 73 ntBASIC-2.44□□□□□ -2.8
TRAV1-1A0A0B4J248 Y_RNA.519-201ENST00000384553 102 ntBASIC-2.44□□□□□ -2.8
TRAV1-1A0A0B4J248 SNORD116.2-201ENST00000391251 93 ntBASIC-2.44□□□□□ -2.8
TRAV1-1A0A0B4J248 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.44□□□□□ -2.8
TRAV1-1A0A0B4J248 MIR548AI-201ENST00000579940 88 ntBASIC-2.44□□□□□ -2.8
TRAV1-1A0A0B4J248 RNU6-1047P-201ENST00000364418 107 ntBASIC-2.45□□□□□ -2.8
TRAV1-1A0A0B4J248 Y_RNA.261-201ENST00000364631 102 ntBASIC-2.45□□□□□ -2.8
TRAV1-1A0A0B4J248 MIR2052-201ENST00000636055 55 ntBASIC-2.45□□□□□ -2.8
TRAV1-1A0A0B4J248 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-2.45□□□□□ -2.8
TRAV1-1A0A0B4J248 RNU6-834P-201ENST00000362367 110 ntBASIC-2.46□□□□□ -2.8
TRAV1-1A0A0B4J248 Y_RNA.186-201ENST00000363899 92 ntBASIC-2.46□□□□□ -2.8
TRAV1-1A0A0B4J248 RNU6-380P-201ENST00000410207 107 ntBASIC-2.46□□□□□ -2.8
TRAV1-1A0A0B4J248 RNU6-895P-201ENST00000384125 103 ntBASIC-2.47□□□□□ -2.8
TRAV1-1A0A0B4J248 MIR154-201ENST00000385243 84 ntBASIC-2.47□□□□□ -2.8
TRAV1-1A0A0B4J248 MIR1254-1-201ENST00000408257 97 ntBASIC-2.47□□□□□ -2.8
TRAV1-1A0A0B4J248 MIR4426-201ENST00000640330 63 ntBASIC-2.47□□□□□ -2.8
TRAV1-1A0A0B4J248 MIR450A1-201ENST00000362262 91 ntBASIC-2.48□□□□□ -2.81
TRAV1-1A0A0B4J248 RNU6-230P-201ENST00000362457 104 ntBASIC-2.48□□□□□ -2.81
TRAV1-1A0A0B4J248 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.48□□□□□ -2.81
TRAV1-1A0A0B4J248 RNY1P5-201ENST00000383890 115 ntBASIC-2.48□□□□□ -2.81
TRAV1-1A0A0B4J248 Y_RNA.434-201ENST00000384090 100 ntBASIC-2.48□□□□□ -2.81
TRAV1-1A0A0B4J248 MIR379-201ENST00000362218 67 ntBASIC-2.49□□□□□ -2.81
TRAV1-1A0A0B4J248 Y_RNA.320-201ENST00000365144 102 ntBASIC-2.49□□□□□ -2.81
TRAV1-1A0A0B4J248 RNU6-675P-201ENST00000384236 104 ntBASIC-2.49□□□□□ -2.81
TRAV1-1A0A0B4J248 RNU6-542P-201ENST00000516405 103 ntBASIC-2.49□□□□□ -2.81
TRAV1-1A0A0B4J248 RNU6-70P-201ENST00000516438 60 ntBASIC-2.49□□□□□ -2.81
TRAV1-1A0A0B4J248 RNU6-1212P-201ENST00000517023 104 ntBASIC-2.49□□□□□ -2.81
TRAV1-1A0A0B4J248 RNU6-315P-201ENST00000362666 107 ntBASIC-2.5□□□□□ -2.81
TRAV1-1A0A0B4J248 Y_RNA.397-201ENST00000383950 98 ntBASIC-2.5□□□□□ -2.81
TRAV1-1A0A0B4J248 RNU6-463P-201ENST00000384340 107 ntBASIC-2.5□□□□□ -2.81
TRAV1-1A0A0B4J248 SNORA40B-201ENST00000385573 128 ntBASIC-2.5□□□□□ -2.81
TRAV1-1A0A0B4J248 RNU6-589P-201ENST00000516485 107 ntBASIC-2.5□□□□□ -2.81
TRAV1-1A0A0B4J248 RNU6-1015P-201ENST00000517121 99 ntBASIC-2.5□□□□□ -2.81
TRAV1-1A0A0B4J248 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-2.5□□□□□ -2.81
TRAV1-1A0A0B4J248 MIR488-201ENST00000365739 83 ntBASIC-2.51□□□□□ -2.81
TRAV1-1A0A0B4J248 AL117351.2-201ENST00000513571 157 ntBASIC-2.51□□□□□ -2.81
TRAV1-1A0A0B4J248 RNU6-1045P-201ENST00000516321 107 ntBASIC-2.51□□□□□ -2.81
TRAV1-1A0A0B4J248 SNORA40.16-201ENST00000517238 121 ntBASIC-2.51□□□□□ -2.81
TRAV1-1A0A0B4J248 Y_RNA.788-201ENST00000622394 112 ntBASIC-2.51□□□□□ -2.81
TRAV1-1A0A0B4J248 RNU6-590P-201ENST00000365039 107 ntBASIC-2.52□□□□□ -2.81
TRAV1-1A0A0B4J248 Y_RNA.464-201ENST00000384282 110 ntBASIC-2.52□□□□□ -2.81
TRAV1-1A0A0B4J248 Y_RNA.607-201ENST00000410597 98 ntBASIC-2.52□□□□□ -2.81
TRAV1-1A0A0B4J248 TMSB4XP3-201ENST00000445144 114 ntBASIC-2.52□□□□□ -2.81
TRAV1-1A0A0B4J248 Y_RNA.73-201ENST00000362910 113 ntBASIC-2.53□□□□□ -2.81
TRAV1-1A0A0B4J248 RNU6-300P-201ENST00000459080 104 ntBASIC-2.53□□□□□ -2.81
TRAV1-1A0A0B4J248 snoMBII-202.2-201ENST00000517263 86 ntBASIC-2.53□□□□□ -2.81
TRAV1-1A0A0B4J248 Y_RNA.316-201ENST00000365118 111 ntBASIC-2.54□□□□□ -2.82
TRAV1-1A0A0B4J248 Y_RNA.443-201ENST00000384135 111 ntBASIC-2.54□□□□□ -2.82
TRAV1-1A0A0B4J248 AL031737.1-201ENST00000450125 223 ntBASIC-2.54□□□□□ -2.82
TRAV1-1A0A0B4J248 SNORA40.13-201ENST00000516379 120 ntBASIC-2.54□□□□□ -2.82
TRAV1-1A0A0B4J248 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-2.54□□□□□ -2.82
TRAV1-1A0A0B4J248 Y_RNA.63-201ENST00000362841 102 ntBASIC-2.55□□□□□ -2.82
TRAV1-1A0A0B4J248 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-2.56□□□□□ -2.82
TRAV1-1A0A0B4J248 AL451105.1-201ENST00000450005 189 ntBASIC-2.56□□□□□ -2.82
TRAV1-1A0A0B4J248 RNU6-844P-201ENST00000517175 102 ntBASIC-2.56□□□□□ -2.82
TRAV1-1A0A0B4J248 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.57□□□□□ -2.82
TRAV1-1A0A0B4J248 MT-TG-201ENST00000387429 68 ntBASIC-2.57□□□□□ -2.82
TRAV1-1A0A0B4J248 MIR3134-201ENST00000579433 74 ntBASIC-2.57□□□□□ -2.82
TRAV1-1A0A0B4J248 Y_RNA.17-201ENST00000362433 111 ntBASIC-2.58□□□□□ -2.82
TRAV1-1A0A0B4J248 RNU6-1277P-201ENST00000364561 107 ntBASIC-2.58□□□□□ -2.82
TRAV1-1A0A0B4J248 SCARNA15.1-201ENST00000516384 125 ntBASIC-2.59□□□□□ -2.82
TRAV1-1A0A0B4J248 RNU6-687P-201ENST00000516443 89 ntBASIC-2.59□□□□□ -2.82
TRAV1-1A0A0B4J248 RNU6-742P-201ENST00000365289 107 ntBASIC-2.6□□□□□ -2.83
TRAV1-1A0A0B4J248 Y_RNA.593-201ENST00000410292 98 ntBASIC-2.6□□□□□ -2.83
TRAV1-1A0A0B4J248 MIR4712-201ENST00000583750 82 ntBASIC-2.6□□□□□ -2.83
TRAV1-1A0A0B4J248 AL365222.1-201ENST00000614661 98 ntBASIC-2.6□□□□□ -2.83
TRAV1-1A0A0B4J248 Y_RNA.59-201ENST00000362828 102 ntBASIC-2.61□□□□□ -2.83
TRAV1-1A0A0B4J248 RNU6-1079P-201ENST00000362861 110 ntBASIC-2.61□□□□□ -2.83
TRAV1-1A0A0B4J248 RNU6-640P-201ENST00000363693 105 ntBASIC-2.61□□□□□ -2.83
TRAV1-1A0A0B4J248 Y_RNA.273-201ENST00000364703 102 ntBASIC-2.61□□□□□ -2.83
TRAV1-1A0A0B4J248 Y_RNA.709-201ENST00000516952 92 ntBASIC-2.61□□□□□ -2.83
TRAV1-1A0A0B4J248 MIR5588-201ENST00000581890 63 ntBASIC-2.61□□□□□ -2.83
TRAV1-1A0A0B4J248 SNORD45.2-201ENST00000363552 72 ntBASIC-2.62□□□□□ -2.83
TRAV1-1A0A0B4J248 MIR5693-201ENST00000577722 73 ntBASIC-2.62□□□□□ -2.83
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms