Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 RNY4P9-201ENST00000363194 97 ntBASIC-2.76□□□□□ -2.85
TRAV12-1A0A0B4J245 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.76□□□□□ -2.85
TRAV12-1A0A0B4J245 RNU6-255P-201ENST00000516957 105 ntBASIC-2.76□□□□□ -2.85
TRAV12-1A0A0B4J245 Y_RNA.403-201ENST00000383977 101 ntBASIC-2.77□□□□□ -2.85
TRAV12-1A0A0B4J245 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.78□□□□□ -2.85
TRAV12-1A0A0B4J245 SNORA17.4-201ENST00000391287 132 ntBASIC-2.78□□□□□ -2.85
TRAV12-1A0A0B4J245 MALAT1.1-201ENST00000618249 95 ntBASIC-2.78□□□□□ -2.85
TRAV12-1A0A0B4J245 AC006160.2-201ENST00000637708 154 ntBASIC-2.78□□□□□ -2.85
TRAV12-1A0A0B4J245 SNORD116-24-201ENST00000384549 92 ntBASIC-2.79□□□□□ -2.86
TRAV12-1A0A0B4J245 Y_RNA.291-201ENST00000364886 113 ntBASIC-2.8□□□□□ -2.86
TRAV12-1A0A0B4J245 MIR7110-201ENST00000612638 86 ntBASIC-2.8□□□□□ -2.86
TRAV12-1A0A0B4J245 RNU6-361P-201ENST00000364454 107 ntBASIC-2.81□□□□□ -2.86
TRAV12-1A0A0B4J245 RNU6-895P-201ENST00000384125 103 ntBASIC-2.81□□□□□ -2.86
TRAV12-1A0A0B4J245 RNU6-92P-201ENST00000605893 104 ntBASIC-2.81□□□□□ -2.86
TRAV12-1A0A0B4J245 Y_RNA.261-201ENST00000364631 102 ntBASIC-2.82□□□□□ -2.86
TRAV12-1A0A0B4J245 RNU6-1241P-201ENST00000384536 107 ntBASIC-2.82□□□□□ -2.86
TRAV12-1A0A0B4J245 Y_RNA.629-201ENST00000411368 105 ntBASIC-2.82□□□□□ -2.86
TRAV12-1A0A0B4J245 AP001094.1-201ENST00000579805 193 ntBASIC-2.82□□□□□ -2.86
TRAV12-1A0A0B4J245 RNU6-315P-201ENST00000362666 107 ntBASIC-2.83□□□□□ -2.86
TRAV12-1A0A0B4J245 RNU6-810P-201ENST00000364001 107 ntBASIC-2.83□□□□□ -2.86
TRAV12-1A0A0B4J245 RNU6-1324P-201ENST00000384222 107 ntBASIC-2.83□□□□□ -2.86
TRAV12-1A0A0B4J245 SNORD113-3-201ENST00000364830 72 ntBASIC-2.84□□□□□ -2.86
TRAV12-1A0A0B4J245 RNU6-1011P-201ENST00000384668 107 ntBASIC-2.84□□□□□ -2.86
TRAV12-1A0A0B4J245 MIR154-201ENST00000385243 84 ntBASIC-2.84□□□□□ -2.86
TRAV12-1A0A0B4J245 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-2.84□□□□□ -2.86
TRAV12-1A0A0B4J245 RNU6-542P-201ENST00000516405 103 ntBASIC-2.84□□□□□ -2.86
TRAV12-1A0A0B4J245 RNU6-589P-201ENST00000516485 107 ntBASIC-2.84□□□□□ -2.86
TRAV12-1A0A0B4J245 RNU6-230P-201ENST00000362457 104 ntBASIC-2.85□□□□□ -2.87
TRAV12-1A0A0B4J245 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.85□□□□□ -2.87
TRAV12-1A0A0B4J245 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-2.85□□□□□ -2.87
TRAV12-1A0A0B4J245 RNU6-675P-201ENST00000384236 104 ntBASIC-2.86□□□□□ -2.87
TRAV12-1A0A0B4J245 AL031737.1-201ENST00000450125 223 ntBASIC-2.86□□□□□ -2.87
TRAV12-1A0A0B4J245 SNORA40.13-201ENST00000516379 120 ntBASIC-2.86□□□□□ -2.87
TRAV12-1A0A0B4J245 SCARNA15.1-201ENST00000516384 125 ntBASIC-2.86□□□□□ -2.87
TRAV12-1A0A0B4J245 RNU6-1191P-201ENST00000516799 107 ntBASIC-2.86□□□□□ -2.87
TRAV12-1A0A0B4J245 MIR548AI-201ENST00000579940 88 ntBASIC-2.86□□□□□ -2.87
TRAV12-1A0A0B4J245 RNU6-141P-201ENST00000410499 105 ntBASIC-2.87□□□□□ -2.87
TRAV12-1A0A0B4J245 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.87□□□□□ -2.87
TRAV12-1A0A0B4J245 RNU6-231P-201ENST00000517122 103 ntBASIC-2.87□□□□□ -2.87
TRAV12-1A0A0B4J245 MIR379-201ENST00000362218 67 ntBASIC-2.88□□□□□ -2.87
TRAV12-1A0A0B4J245 MIR450A1-201ENST00000362262 91 ntBASIC-2.88□□□□□ -2.87
TRAV12-1A0A0B4J245 SNORD60.1-201ENST00000362451 73 ntBASIC-2.88□□□□□ -2.87
TRAV12-1A0A0B4J245 Y_RNA.273-201ENST00000364703 102 ntBASIC-2.88□□□□□ -2.87
TRAV12-1A0A0B4J245 Y_RNA.313-201ENST00000365095 103 ntBASIC-2.88□□□□□ -2.87
TRAV12-1A0A0B4J245 Y_RNA.443-201ENST00000384135 111 ntBASIC-2.88□□□□□ -2.87
TRAV12-1A0A0B4J245 RNU6-530P-201ENST00000391180 107 ntBASIC-2.88□□□□□ -2.87
TRAV12-1A0A0B4J245 SNORD116.2-201ENST00000391251 93 ntBASIC-2.88□□□□□ -2.87
TRAV12-1A0A0B4J245 Y_RNA.607-201ENST00000410597 98 ntBASIC-2.88□□□□□ -2.87
TRAV12-1A0A0B4J245 RNU6-912P-201ENST00000363800 104 ntBASIC-2.89□□□□□ -2.87
TRAV12-1A0A0B4J245 RNY4P7-201ENST00000364600 96 ntBASIC-2.89□□□□□ -2.87
TRAV12-1A0A0B4J245 RNU6-70P-201ENST00000516438 60 ntBASIC-2.89□□□□□ -2.87
TRAV12-1A0A0B4J245 Y_RNA.513-201ENST00000384522 100 ntBASIC-2.9□□□□□ -2.87
TRAV12-1A0A0B4J245 Y_RNA.519-201ENST00000384553 102 ntBASIC-2.9□□□□□ -2.87
TRAV12-1A0A0B4J245 RNU6-834P-201ENST00000362367 110 ntBASIC-2.91□□□□□ -2.88
TRAV12-1A0A0B4J245 RNU6-694P-201ENST00000364071 147 ntBASIC-2.91□□□□□ -2.88
TRAV12-1A0A0B4J245 Y_RNA.397-201ENST00000383950 98 ntBASIC-2.91□□□□□ -2.88
TRAV12-1A0A0B4J245 AC008267.6-201ENST00000441664 139 ntBASIC-2.91□□□□□ -2.88
TRAV12-1A0A0B4J245 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-2.91□□□□□ -2.88
TRAV12-1A0A0B4J245 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.92□□□□□ -2.88
TRAV12-1A0A0B4J245 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.92□□□□□ -2.88
TRAV12-1A0A0B4J245 SNX3P1Y-201ENST00000615757 176 ntBASIC-2.92□□□□□ -2.88
TRAV12-1A0A0B4J245 RNU6-1056P-201ENST00000383996 107 ntBASIC-2.93□□□□□ -2.88
TRAV12-1A0A0B4J245 TMSB4XP3-201ENST00000445144 114 ntBASIC-2.93□□□□□ -2.88
TRAV12-1A0A0B4J245 RNU6-68P-201ENST00000516576 104 ntBASIC-2.93□□□□□ -2.88
TRAV12-1A0A0B4J245 RNU6-844P-201ENST00000517175 102 ntBASIC-2.93□□□□□ -2.88
TRAV12-1A0A0B4J245 SNORA40B-201ENST00000385573 128 ntBASIC-2.94□□□□□ -2.88
TRAV12-1A0A0B4J245 MIR548AJ2-201ENST00000408539 92 ntBASIC-2.94□□□□□ -2.88
TRAV12-1A0A0B4J245 MIR4426-201ENST00000640330 63 ntBASIC-2.94□□□□□ -2.88
TRAV12-1A0A0B4J245 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.95□□□□□ -2.88
TRAV12-1A0A0B4J245 SNORD45.2-201ENST00000363552 72 ntBASIC-2.95□□□□□ -2.88
TRAV12-1A0A0B4J245 Y_RNA.316-201ENST00000365118 111 ntBASIC-2.95□□□□□ -2.88
TRAV12-1A0A0B4J245 MIR488-201ENST00000365739 83 ntBASIC-2.95□□□□□ -2.88
TRAV12-1A0A0B4J245 Y_RNA.709-201ENST00000516952 92 ntBASIC-2.95□□□□□ -2.88
TRAV12-1A0A0B4J245 RNU6-959P-201ENST00000384671 107 ntBASIC-2.96□□□□□ -2.88
TRAV12-1A0A0B4J245 snoMBII-202.2-201ENST00000517263 86 ntBASIC-2.96□□□□□ -2.88
TRAV12-1A0A0B4J245 RNU6-300P-201ENST00000459080 104 ntBASIC-2.98□□□□□ -2.89
TRAV12-1A0A0B4J245 AL365222.1-201ENST00000614661 98 ntBASIC-2.98□□□□□ -2.89
TRAV12-1A0A0B4J245 Y_RNA.17-201ENST00000362433 111 ntBASIC-2.99□□□□□ -2.89
TRAV12-1A0A0B4J245 RNU6-1047P-201ENST00000364418 107 ntBASIC-2.99□□□□□ -2.89
TRAV12-1A0A0B4J245 RNU6-590P-201ENST00000365039 107 ntBASIC-2.99□□□□□ -2.89
TRAV12-1A0A0B4J245 RNU6-176P-201ENST00000517196 105 ntBASIC-2.99□□□□□ -2.89
TRAV12-1A0A0B4J245 AL451105.1-201ENST00000450005 189 ntBASIC-3□□□□□ -2.89
TRAV12-1A0A0B4J245 Y_RNA.73-201ENST00000362910 113 ntBASIC-3.01□□□□□ -2.89
TRAV12-1A0A0B4J245 Y_RNA.186-201ENST00000363899 92 ntBASIC-3.01□□□□□ -2.89
TRAV12-1A0A0B4J245 SNORA40.16-201ENST00000517238 121 ntBASIC-3.01□□□□□ -2.89
TRAV12-1A0A0B4J245 MIR5588-201ENST00000581890 63 ntBASIC-3.02□□□□□ -2.89
TRAV12-1A0A0B4J245 MIR4712-201ENST00000583750 82 ntBASIC-3.03□□□□□ -2.89
TRAV12-1A0A0B4J245 IGLL4P-201ENST00000614590 133 ntBASIC-3.03□□□□□ -2.89
TRAV12-1A0A0B4J245 Y_RNA.204-201ENST00000364112 102 ntBASIC-3.04□□□□□ -2.9
TRAV12-1A0A0B4J245 RNU6-1134P-201ENST00000365156 101 ntBASIC-3.04□□□□□ -2.9
TRAV12-1A0A0B4J245 MIR1254-1-201ENST00000408257 97 ntBASIC-3.04□□□□□ -2.9
TRAV12-1A0A0B4J245 RNU6-687P-201ENST00000516443 89 ntBASIC-3.04□□□□□ -2.9
TRAV12-1A0A0B4J245 Y_RNA.788-201ENST00000622394 112 ntBASIC-3.04□□□□□ -2.9
TRAV12-1A0A0B4J245 RNU6-640P-201ENST00000363693 105 ntBASIC-3.05□□□□□ -2.9
TRAV12-1A0A0B4J245 Y_RNA.320-201ENST00000365144 102 ntBASIC-3.05□□□□□ -2.9
TRAV12-1A0A0B4J245 Y_RNA.434-201ENST00000384090 100 ntBASIC-3.05□□□□□ -2.9
TRAV12-1A0A0B4J245 Y_RNA.593-201ENST00000410292 98 ntBASIC-3.05□□□□□ -2.9
TRAV12-1A0A0B4J245 Y_RNA.703-201ENST00000516846 111 ntBASIC-3.05□□□□□ -2.9
TRAV12-1A0A0B4J245 MIR3134-201ENST00000579433 74 ntBASIC-3.05□□□□□ -2.9
TRAV12-1A0A0B4J245 MIR3133-201ENST00000583157 78 ntBASIC-3.05□□□□□ -2.9
Retrieved 100 of 98,524 protein–RNA pairs in 204.8 ms