Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 RNU6-1211P-201ENST00000459179 105 ntBASIC-2.97□□□□□ -2.88
APOBP04114 MIR548H4-201ENST00000408689 111 ntBASIC-2.97□□□□□ -2.88
APOBP04114 MIR4282-201ENST00000583613 67 ntBASIC-2.97□□□□□ -2.88
APOBP04114 Y_RNA.84-201ENST00000363011 104 ntBASIC-2.97□□□□□ -2.89
APOBP04114 RNU6-275P-201ENST00000364910 107 ntBASIC-2.97□□□□□ -2.89
APOBP04114 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-2.97□□□□□ -2.89
APOBP04114 RNU6-620P-201ENST00000384017 96 ntBASIC-2.98□□□□□ -2.89
APOBP04114 RNU6-770P-201ENST00000363929 105 ntBASIC-2.98□□□□□ -2.89
APOBP04114 RNU6-1204P-201ENST00000363948 107 ntBASIC-2.98□□□□□ -2.89
APOBP04114 RNU6-876P-201ENST00000391295 104 ntBASIC-2.98□□□□□ -2.89
APOBP04114 Y_RNA.607-201ENST00000410597 98 ntBASIC-2.98□□□□□ -2.89
APOBP04114 Y_RNA.252-201ENST00000364556 101 ntBASIC-2.99□□□□□ -2.89
APOBP04114 RNU6-239P-201ENST00000390990 99 ntBASIC-2.99□□□□□ -2.89
APOBP04114 RNU7-125P-201ENST00000458760 62 ntBASIC-2.99□□□□□ -2.89
APOBP04114 Y_RNA.276-201ENST00000364732 109 ntBASIC-2.99□□□□□ -2.89
APOBP04114 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-2.99□□□□□ -2.89
APOBP04114 RNU6-659P-201ENST00000516454 104 ntBASIC-2.99□□□□□ -2.89
APOBP04114 AP001340.1-201ENST00000624405 217 ntBASIC-2.99□□□□□ -2.89
APOBP04114 MIRLET7A1-201ENST00000362295 80 ntBASIC-3□□□□□ -2.89
APOBP04114 Y_RNA.194-201ENST00000363985 102 ntBASIC-3□□□□□ -2.89
APOBP04114 MIR1302-11-201ENST00000408051 138 ntBASIC-3□□□□□ -2.89
APOBP04114 MIR1302-9-201ENST00000408365 138 ntBASIC-3□□□□□ -2.89
APOBP04114 MIR1302-10-201ENST00000408734 138 ntBASIC-3□□□□□ -2.89
APOBP04114 MIR1302-2-201ENST00000607096 138 ntBASIC-3□□□□□ -2.89
APOBP04114 RNU6-986P-201ENST00000363133 102 ntBASIC-3□□□□□ -2.89
APOBP04114 DEFB108C-201ENST00000400154 252 ntBASIC-3□□□□□ -2.89
APOBP04114 RNU6-915P-201ENST00000364943 103 ntBASIC-3.01□□□□□ -2.89
APOBP04114 MIR4668-201ENST00000582284 70 ntBASIC-3.01□□□□□ -2.89
APOBP04114 SNORA25.5-201ENST00000363782 126 ntBASIC-3.01□□□□□ -2.89
APOBP04114 RNU6-904P-201ENST00000516206 101 ntBASIC-3.01□□□□□ -2.89
APOBP04114 SNORD116-24-201ENST00000384549 92 ntBASIC-3.02□□□□□ -2.89
APOBP04114 RNU6-808P-201ENST00000391233 108 ntBASIC-3.02□□□□□ -2.89
APOBP04114 RNY3P15-201ENST00000516297 97 ntBASIC-3.02□□□□□ -2.89
APOBP04114 DLEU2_1.1-201ENST00000612089 120 ntBASIC-3.02□□□□□ -2.89
APOBP04114 Y_RNA.89-201ENST00000363031 102 ntBASIC-3.02□□□□□ -2.89
APOBP04114 Y_RNA.387-201ENST00000383918 102 ntBASIC-3.02□□□□□ -2.89
APOBP04114 Y_RNA.661-201ENST00000516003 99 ntBASIC-3.02□□□□□ -2.89
APOBP04114 SNORD11.1-201ENST00000459482 85 ntBASIC-3.02□□□□□ -2.89
APOBP04114 RNU6-122P-201ENST00000516818 107 ntBASIC-3.02□□□□□ -2.89
APOBP04114 MIR2052-201ENST00000636055 55 ntBASIC-3.02□□□□□ -2.89
APOBP04114 RNU6-460P-201ENST00000391158 108 ntBASIC-3.03□□□□□ -2.89
APOBP04114 SCARNA15.1-201ENST00000516384 125 ntBASIC-3.03□□□□□ -2.89
APOBP04114 RNU6-1227P-201ENST00000383981 107 ntBASIC-3.03□□□□□ -2.89
APOBP04114 RNY3P16-201ENST00000516338 101 ntBASIC-3.03□□□□□ -2.89
APOBP04114 DNAJC19P2-201ENST00000593340 302 ntBASIC-3.03□□□□□ -2.89
APOBP04114 RNU6-121P-201ENST00000410525 99 ntBASIC-3.03□□□□□ -2.89
APOBP04114 RNU6-411P-201ENST00000384451 107 ntBASIC-3.04□□□□□ -2.9
APOBP04114 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-3.04□□□□□ -2.9
APOBP04114 RNU7-30P-201ENST00000516835 62 ntBASIC-3.04□□□□□ -2.9
APOBP04114 RNU6-751P-201ENST00000516382 101 ntBASIC-3.04□□□□□ -2.9
APOBP04114 AC113139.1-201ENST00000605049 239 ntBASIC-3.05□□□□□ -2.9
APOBP04114 SNORD58B-201ENST00000607313 66 ntBASIC-3.05□□□□□ -2.9
APOBP04114 Y_RNA.532-201ENST00000384590 113 ntBASIC-3.05□□□□□ -2.9
APOBP04114 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-3.05□□□□□ -2.9
APOBP04114 RNU6-1061P-201ENST00000516530 99 ntBASIC-3.05□□□□□ -2.9
APOBP04114 Y_RNA.635-201ENST00000459041 101 ntBASIC-3.05□□□□□ -2.9
APOBP04114 RNU6-70P-201ENST00000516438 60 ntBASIC-3.05□□□□□ -2.9
APOBP04114 AL160413.1-201ENST00000622780 310 ntBASIC-3.05□□□□□ -2.9
APOBP04114 AL157777.2-201ENST00000258070 137 ntBASIC-3.06□□□□□ -2.9
APOBP04114 Y_RNA.187-201ENST00000363918 113 ntBASIC-3.06□□□□□ -2.9
APOBP04114 RNU6-1107P-201ENST00000364817 104 ntBASIC-3.06□□□□□ -2.9
APOBP04114 AC109635.3-201ENST00000529536 185 ntBASIC-3.06□□□□□ -2.9
APOBP04114 SNORD58.1-201ENST00000391313 66 ntBASIC-3.06□□□□□ -2.9
APOBP04114 Y_RNA.259-201ENST00000364619 101 ntBASIC-3.08□□□□□ -2.9
APOBP04114 SNORD58C-201ENST00000365223 64 ntBASIC-3.08□□□□□ -2.9
APOBP04114 RNU6-259P-201ENST00000383999 107 ntBASIC-3.08□□□□□ -2.9
APOBP04114 MTATP6P25-201ENST00000574491 261 ntBASIC-3.08□□□□□ -2.9
APOBP04114 RNY4P19-201ENST00000362530 96 ntBASIC-3.09□□□□□ -2.9
APOBP04114 SNORD127-201ENST00000458892 86 ntBASIC-3.09□□□□□ -2.9
APOBP04114 RNU6-988P-201ENST00000519081 107 ntBASIC-3.09□□□□□ -2.9
APOBP04114 Y_RNA.459-201ENST00000384251 102 ntBASIC-3.09□□□□□ -2.9
APOBP04114 RNU6-823P-201ENST00000391042 103 ntBASIC-3.09□□□□□ -2.9
APOBP04114 AL158147.1-201ENST00000443970 75 ntBASIC-3.09□□□□□ -2.9
APOBP04114 U7.3-201ENST00000616123 62 ntBASIC-3.09□□□□□ -2.9
APOBP04114 Y_RNA.19-201ENST00000362462 99 ntBASIC-3.1□□□□□ -2.91
APOBP04114 RNU6-895P-201ENST00000384125 103 ntBASIC-3.1□□□□□ -2.91
APOBP04114 MIR154-201ENST00000385243 84 ntBASIC-3.1□□□□□ -2.91
APOBP04114 Y_RNA.632-201ENST00000459189 102 ntBASIC-3.1□□□□□ -2.91
APOBP04114 RNU6-633P-201ENST00000362612 103 ntBASIC-3.11□□□□□ -2.91
APOBP04114 MIR1252-201ENST00000408861 65 ntBASIC-3.11□□□□□ -2.91
APOBP04114 U7.2-201ENST00000607576 63 ntBASIC-3.11□□□□□ -2.91
APOBP04114 MTND4LP32-201ENST00000636111 270 ntBASIC-3.12□□□□□ -2.91
APOBP04114 RNU7-152P-201ENST00000458982 64 ntBASIC-3.12□□□□□ -2.91
APOBP04114 RNU6-314P-201ENST00000516574 104 ntBASIC-3.12□□□□□ -2.91
APOBP04114 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-3.12□□□□□ -2.91
APOBP04114 Y_RNA.93-201ENST00000363066 109 ntBASIC-3.13□□□□□ -2.91
APOBP04114 RNU4-33P-201ENST00000364316 85 ntBASIC-3.13□□□□□ -2.91
APOBP04114 SNORD116-29-201ENST00000384516 83 ntBASIC-3.14□□□□□ -2.91
APOBP04114 MIR3938-201ENST00000582157 103 ntBASIC-3.14□□□□□ -2.91
APOBP04114 RNU6-1312P-201ENST00000362425 108 ntBASIC-3.14□□□□□ -2.91
APOBP04114 Y_RNA.720-201ENST00000517166 92 ntBASIC-3.14□□□□□ -2.91
APOBP04114 RNU6-780P-201ENST00000391030 104 ntBASIC-3.15□□□□□ -2.91
APOBP04114 RNU6-838P-201ENST00000363399 108 ntBASIC-3.15□□□□□ -2.91
APOBP04114 Y_RNA.219-201ENST00000364232 113 ntBASIC-3.15□□□□□ -2.91
APOBP04114 AC009094.1-201ENST00000564443 426 ntBASIC-3.15□□□□□ -2.91
APOBP04114 RNU6-1015P-201ENST00000517121 99 ntBASIC-3.15□□□□□ -2.91
APOBP04114 RNU6-956P-201ENST00000458868 103 ntBASIC-3.16□□□□□ -2.92
APOBP04114 Y_RNA.272-201ENST00000364696 102 ntBASIC-3.17□□□□□ -2.92
APOBP04114 RNU6-574P-201ENST00000384265 107 ntBASIC-3.17□□□□□ -2.92
APOBP04114 SNORD116-22-201ENST00000384430 92 ntBASIC-3.17□□□□□ -2.92
Retrieved 100 of 98,524 protein–RNA pairs in 176.6 ms