Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 RNU6-1061P-201ENST00000516530 99 ntBASIC-4.68□□□□□ -3.16
CHD1O14646 MIR1297-201ENST00000637311 77 ntBASIC-4.68□□□□□ -3.16
CHD1O14646 RNU6-713P-201ENST00000384761 107 ntBASIC-4.69□□□□□ -3.16
CHD1O14646 AC074348.1-201ENST00000426503 132 ntBASIC-4.69□□□□□ -3.16
CHD1O14646 AP001318.4-201ENST00000616637 121 ntBASIC-4.69□□□□□ -3.16
CHD1O14646 Y_RNA.320-201ENST00000365144 102 ntBASIC-4.69□□□□□ -3.16
CHD1O14646 MIR7110-201ENST00000612638 86 ntBASIC-4.69□□□□□ -3.16
CHD1O14646 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-4.7□□□□□ -3.16
CHD1O14646 RNU6-1169P-201ENST00000363537 103 ntBASIC-4.71□□□□□ -3.16
CHD1O14646 SNORD58C-201ENST00000365223 64 ntBASIC-4.71□□□□□ -3.16
CHD1O14646 Y_RNA.459-201ENST00000384251 102 ntBASIC-4.71□□□□□ -3.16
CHD1O14646 MIR548F1-201ENST00000408667 84 ntBASIC-4.72□□□□□ -3.16
CHD1O14646 Y_RNA.680-201ENST00000516441 93 ntBASIC-4.72□□□□□ -3.17
CHD1O14646 Y_RNA.70-201ENST00000362886 110 ntBASIC-4.73□□□□□ -3.17
CHD1O14646 MIR656-201ENST00000385224 78 ntBASIC-4.75□□□□□ -3.17
CHD1O14646 Y_RNA.586-201ENST00000391146 98 ntBASIC-4.75□□□□□ -3.17
CHD1O14646 RNU7-61P-201ENST00000515897 61 ntBASIC-4.75□□□□□ -3.17
CHD1O14646 RNU6-876P-201ENST00000391295 104 ntBASIC-4.77□□□□□ -3.17
CHD1O14646 RNU6-402P-201ENST00000410678 103 ntBASIC-4.77□□□□□ -3.17
CHD1O14646 SNORA33.2-201ENST00000365413 134 ntBASIC-4.77□□□□□ -3.17
CHD1O14646 RNU6-789P-201ENST00000517105 102 ntBASIC-4.77□□□□□ -3.17
CHD1O14646 RNU6-822P-201ENST00000362707 106 ntBASIC-4.78□□□□□ -3.17
CHD1O14646 RNU6-1219P-201ENST00000516143 112 ntBASIC-4.78□□□□□ -3.17
CHD1O14646 Y_RNA.318-201ENST00000365131 97 ntBASIC-4.79□□□□□ -3.18
CHD1O14646 RNU6-574P-201ENST00000384265 107 ntBASIC-4.79□□□□□ -3.18
CHD1O14646 SNORD116.2-201ENST00000391251 93 ntBASIC-4.79□□□□□ -3.18
CHD1O14646 AC062037.1-201ENST00000605302 128 ntBASIC-4.79□□□□□ -3.18
CHD1O14646 U7.2-201ENST00000607576 63 ntBASIC-4.79□□□□□ -3.18
CHD1O14646 MIR363-201ENST00000384840 75 ntBASIC-4.8□□□□□ -3.18
CHD1O14646 RNU6-1135P-201ENST00000411083 103 ntBASIC-4.8□□□□□ -3.18
CHD1O14646 RNU6-1325P-201ENST00000364905 105 ntBASIC-4.81□□□□□ -3.18
CHD1O14646 RNU6-1340P-201ENST00000384438 107 ntBASIC-4.81□□□□□ -3.18
CHD1O14646 SNORD58.1-201ENST00000391313 66 ntBASIC-4.81□□□□□ -3.18
CHD1O14646 AC139792.2-201ENST00000624218 587 ntBASIC-4.81□□□□□ -3.18
CHD1O14646 Y_RNA.17-201ENST00000362433 111 ntBASIC-4.82□□□□□ -3.18
CHD1O14646 RNU6-854P-201ENST00000364036 107 ntBASIC-4.82□□□□□ -3.18
CHD1O14646 RNU6-1124P-201ENST00000384169 107 ntBASIC-4.82□□□□□ -3.18
CHD1O14646 SNORD45A-201ENST00000384512 84 ntBASIC-4.83□□□□□ -3.18
CHD1O14646 RNU6-542P-201ENST00000516405 103 ntBASIC-4.83□□□□□ -3.18
CHD1O14646 RNU6-92P-201ENST00000605893 104 ntBASIC-4.83□□□□□ -3.18
CHD1O14646 SNORA40B-201ENST00000385573 128 ntBASIC-4.83□□□□□ -3.18
CHD1O14646 AL451105.1-201ENST00000450005 189 ntBASIC-4.83□□□□□ -3.18
CHD1O14646 RNU6-557P-201ENST00000516842 110 ntBASIC-4.83□□□□□ -3.18
CHD1O14646 Y_RNA.43-201ENST00000362670 111 ntBASIC-4.84□□□□□ -3.18
CHD1O14646 SNORD42.2-201ENST00000365570 69 ntBASIC-4.84□□□□□ -3.18
CHD1O14646 AC093729.1-201ENST00000513074 128 ntBASIC-4.84□□□□□ -3.18
CHD1O14646 RNU6-1211P-201ENST00000459179 105 ntBASIC-4.85□□□□□ -3.19
CHD1O14646 RNU4-40P-201ENST00000364351 143 ntBASIC-4.86□□□□□ -3.19
CHD1O14646 SNORA81.3-201ENST00000517283 198 ntBASIC-4.86□□□□□ -3.19
CHD1O14646 RNU6-633P-201ENST00000362612 103 ntBASIC-4.87□□□□□ -3.19
CHD1O14646 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-4.87□□□□□ -3.19
CHD1O14646 Y_RNA.272-201ENST00000364696 102 ntBASIC-4.88□□□□□ -3.19
CHD1O14646 RNU6-686P-201ENST00000364839 107 ntBASIC-4.88□□□□□ -3.19
CHD1O14646 MIR548AH-201ENST00000637109 76 ntBASIC-4.88□□□□□ -3.19
CHD1O14646 RNU4-71P-201ENST00000516258 113 ntBASIC-4.89□□□□□ -3.19
CHD1O14646 MIR8062-201ENST00000621515 85 ntBASIC-4.89□□□□□ -3.19
CHD1O14646 SNORA63.4-201ENST00000362763 126 ntBASIC-4.9□□□□□ -3.19
CHD1O14646 RNU6-1020P-201ENST00000363684 107 ntBASIC-4.9□□□□□ -3.19
CHD1O14646 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-4.9□□□□□ -3.19
CHD1O14646 RNU6-162P-201ENST00000516228 103 ntBASIC-4.9□□□□□ -3.19
CHD1O14646 RNU6-231P-201ENST00000517122 103 ntBASIC-4.9□□□□□ -3.19
CHD1O14646 RNY3P1-201ENST00000365085 102 ntBASIC-4.91□□□□□ -3.2
CHD1O14646 RNU6-742P-201ENST00000365289 107 ntBASIC-4.91□□□□□ -3.2
CHD1O14646 U7.3-201ENST00000616123 62 ntBASIC-4.91□□□□□ -3.2
CHD1O14646 SNORA63-201ENST00000363450 132 ntBASIC-4.92□□□□□ -3.2
CHD1O14646 MIRLET7A1-201ENST00000362295 80 ntBASIC-4.92□□□□□ -3.2
CHD1O14646 SNORD60.1-201ENST00000362451 73 ntBASIC-4.92□□□□□ -3.2
CHD1O14646 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-4.92□□□□□ -3.2
CHD1O14646 RNU6-904P-201ENST00000516206 101 ntBASIC-4.92□□□□□ -3.2
CHD1O14646 AL157777.2-201ENST00000258070 137 ntBASIC-4.93□□□□□ -3.2
CHD1O14646 RNU6-196P-201ENST00000384315 107 ntBASIC-4.93□□□□□ -3.2
CHD1O14646 RNU6-985P-201ENST00000410182 104 ntBASIC-4.93□□□□□ -3.2
CHD1O14646 AC022559.1-201ENST00000520905 205 ntBASIC-4.94□□□□□ -3.2
CHD1O14646 Y_RNA.532-201ENST00000384590 113 ntBASIC-4.94□□□□□ -3.2
CHD1O14646 Y_RNA.202-201ENST00000364083 110 ntBASIC-4.96□□□□□ -3.2
CHD1O14646 Y_RNA.382-201ENST00000365672 114 ntBASIC-4.96□□□□□ -3.2
CHD1O14646 RNU6-380P-201ENST00000410207 107 ntBASIC-4.96□□□□□ -3.2
CHD1O14646 RNU6-635P-201ENST00000516651 102 ntBASIC-4.96□□□□□ -3.2
CHD1O14646 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-4.96□□□□□ -3.2
CHD1O14646 AC141273.2-201ENST00000618989 130 ntBASIC-4.96□□□□□ -3.2
CHD1O14646 Y_RNA.219-201ENST00000364232 113 ntBASIC-4.97□□□□□ -3.2
CHD1O14646 RNU6-1241P-201ENST00000384536 107 ntBASIC-4.97□□□□□ -3.2
CHD1O14646 MIR548AI-201ENST00000579940 88 ntBASIC-4.97□□□□□ -3.2
CHD1O14646 Y_RNA.20-201ENST00000362479 113 ntBASIC-4.97□□□□□ -3.21
CHD1O14646 TMSB4XP3-201ENST00000445144 114 ntBASIC-4.97□□□□□ -3.21
CHD1O14646 RNU6-659P-201ENST00000516454 104 ntBASIC-4.97□□□□□ -3.21
CHD1O14646 MIR4680-201ENST00000580906 66 ntBASIC-4.97□□□□□ -3.21
CHD1O14646 AC072026.1-201ENST00000605023 201 ntBASIC-4.99□□□□□ -3.21
CHD1O14646 MIR664A-201ENST00000626086 82 ntBASIC-4.99□□□□□ -3.21
CHD1O14646 MIR548X2-201ENST00000579776 100 ntBASIC-5□□□□□ -3.21
CHD1O14646 MIR4484-201ENST00000582855 83 ntBASIC-5□□□□□ -3.21
CHD1O14646 RNU4-85P-201ENST00000364675 123 ntBASIC-5.01□□□□□ -3.21
CHD1O14646 RNU6-474P-201ENST00000384243 107 ntBASIC-5.01□□□□□ -3.21
CHD1O14646 RNU6-772P-201ENST00000516042 105 ntBASIC-5.01□□□□□ -3.21
CHD1O14646 Y_RNA.200-201ENST00000364018 102 ntBASIC-5.02□□□□□ -3.21
CHD1O14646 MTATP8P2-201ENST00000435212 202 ntBASIC-5.02□□□□□ -3.21
CHD1O14646 AC139453.2-201ENST00000487255 133 ntBASIC-5.02□□□□□ -3.21
CHD1O14646 RNU6-1137P-201ENST00000517073 99 ntBASIC-5.02□□□□□ -3.21
CHD1O14646 RNU6-1107P-201ENST00000364817 104 ntBASIC-5.03□□□□□ -3.21
CHD1O14646 Y_RNA.662-201ENST00000516028 97 ntBASIC-5.03□□□□□ -3.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms