Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 RNU6-12P-201ENST00000384604 107 ntBASIC-1.06□□□□□ -2.58
CCDC188H7C350 RNU6-41P-201ENST00000384741 107 ntBASIC-1.06□□□□□ -2.58
CCDC188H7C350 RNU6-645P-201ENST00000364649 106 ntBASIC-1.07□□□□□ -2.58
CCDC188H7C350 RNU6-497P-201ENST00000365316 104 ntBASIC-1.07□□□□□ -2.58
CCDC188H7C350 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.07□□□□□ -2.58
CCDC188H7C350 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.07□□□□□ -2.58
CCDC188H7C350 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.07□□□□□ -2.58
CCDC188H7C350 RNU6-168P-201ENST00000516189 101 ntBASIC-1.07□□□□□ -2.58
CCDC188H7C350 RNU6-557P-201ENST00000516842 110 ntBASIC-1.07□□□□□ -2.58
CCDC188H7C350 RNU6-330P-201ENST00000363015 107 ntBASIC-1.08□□□□□ -2.58
CCDC188H7C350 RNU6-686P-201ENST00000364839 107 ntBASIC-1.08□□□□□ -2.58
CCDC188H7C350 RNU6-147P-201ENST00000383983 107 ntBASIC-1.08□□□□□ -2.58
CCDC188H7C350 MIR548C-201ENST00000384815 97 ntBASIC-1.08□□□□□ -2.58
CCDC188H7C350 AL603908.1-201ENST00000406098 201 ntBASIC-1.08□□□□□ -2.58
CCDC188H7C350 RNU6-303P-201ENST00000517091 106 ntBASIC-1.08□□□□□ -2.58
CCDC188H7C350 AP002795.1-201ENST00000534879 84 ntBASIC-1.08□□□□□ -2.58
CCDC188H7C350 MIR3675-201ENST00000583661 73 ntBASIC-1.08□□□□□ -2.58
CCDC188H7C350 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-1.08□□□□□ -2.58
CCDC188H7C350 RNU6-640P-201ENST00000363693 105 ntBASIC-1.09□□□□□ -2.58
CCDC188H7C350 SNORD20-201ENST00000384550 80 ntBASIC-1.09□□□□□ -2.58
CCDC188H7C350 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.09□□□□□ -2.58
CCDC188H7C350 MIR548AM-201ENST00000584298 74 ntBASIC-1.09□□□□□ -2.58
CCDC188H7C350 U2.7-201ENST00000619197 100 ntBASIC-1.09□□□□□ -2.58
CCDC188H7C350 RNU6-79P-201ENST00000362511 107 ntBASIC-1.1□□□□□ -2.59
CCDC188H7C350 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.1□□□□□ -2.59
CCDC188H7C350 AC090616.4-201ENST00000448026 115 ntBASIC-1.1□□□□□ -2.59
CCDC188H7C350 RNU6-919P-201ENST00000516731 104 ntBASIC-1.1□□□□□ -2.59
CCDC188H7C350 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.11□□□□□ -2.59
CCDC188H7C350 RNU6-215P-201ENST00000365169 102 ntBASIC-1.11□□□□□ -2.59
CCDC188H7C350 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.11□□□□□ -2.59
CCDC188H7C350 RNU6-129P-201ENST00000391022 107 ntBASIC-1.11□□□□□ -2.59
CCDC188H7C350 SNORA26.4-201ENST00000391188 123 ntBASIC-1.11□□□□□ -2.59
CCDC188H7C350 Y_RNA.186-201ENST00000363899 92 ntBASIC-1.12□□□□□ -2.59
CCDC188H7C350 RNU6-478P-201ENST00000363904 110 ntBASIC-1.12□□□□□ -2.59
CCDC188H7C350 SNORA8.1-201ENST00000384250 140 ntBASIC-1.12□□□□□ -2.59
CCDC188H7C350 RPL35AP4-201ENST00000412007 102 ntBASIC-1.12□□□□□ -2.59
CCDC188H7C350 RNU6-807P-201ENST00000516805 107 ntBASIC-1.12□□□□□ -2.59
CCDC188H7C350 MIR548AG1-201ENST00000579932 66 ntBASIC-1.12□□□□□ -2.59
CCDC188H7C350 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.12□□□□□ -2.59
CCDC188H7C350 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.13□□□□□ -2.59
CCDC188H7C350 RNU6-230P-201ENST00000362457 104 ntBASIC-1.13□□□□□ -2.59
CCDC188H7C350 RNU6-400P-201ENST00000391173 106 ntBASIC-1.13□□□□□ -2.59
CCDC188H7C350 RNU6-789P-201ENST00000517105 102 ntBASIC-1.13□□□□□ -2.59
CCDC188H7C350 RNU6-844P-201ENST00000517175 102 ntBASIC-1.13□□□□□ -2.59
CCDC188H7C350 RNU6-675P-201ENST00000384236 104 ntBASIC-1.14□□□□□ -2.59
CCDC188H7C350 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.14□□□□□ -2.59
CCDC188H7C350 RNU6-604P-201ENST00000390917 100 ntBASIC-1.14□□□□□ -2.59
CCDC188H7C350 RNU6-695P-201ENST00000391157 104 ntBASIC-1.14□□□□□ -2.59
CCDC188H7C350 AC074348.1-201ENST00000426503 132 ntBASIC-1.14□□□□□ -2.59
CCDC188H7C350 RNU6-1121P-201ENST00000516802 109 ntBASIC-1.14□□□□□ -2.59
CCDC188H7C350 MIR4748-201ENST00000578076 82 ntBASIC-1.14□□□□□ -2.59
CCDC188H7C350 MIR3123-201ENST00000583417 75 ntBASIC-1.14□□□□□ -2.59
CCDC188H7C350 AC006160.2-201ENST00000637708 154 ntBASIC-1.14□□□□□ -2.59
CCDC188H7C350 SNORD45.1-201ENST00000363181 77 ntBASIC-1.15□□□□□ -2.59
CCDC188H7C350 RNU6-841P-201ENST00000383872 107 ntBASIC-1.15□□□□□ -2.59
CCDC188H7C350 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.15□□□□□ -2.59
CCDC188H7C350 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.16□□□□□ -2.6
CCDC188H7C350 RNU7-88P-201ENST00000458752 63 ntBASIC-1.16□□□□□ -2.6
CCDC188H7C350 RNU6-803P-201ENST00000516034 102 ntBASIC-1.16□□□□□ -2.6
CCDC188H7C350 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.16□□□□□ -2.6
CCDC188H7C350 MIR4484-201ENST00000582855 83 ntBASIC-1.16□□□□□ -2.6
CCDC188H7C350 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.17□□□□□ -2.6
CCDC188H7C350 SNORD115-31-201ENST00000365318 82 ntBASIC-1.17□□□□□ -2.6
CCDC188H7C350 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.17□□□□□ -2.6
CCDC188H7C350 Y_RNA.566-201ENST00000384735 101 ntBASIC-1.17□□□□□ -2.6
CCDC188H7C350 RNU6-982P-201ENST00000516216 102 ntBASIC-1.17□□□□□ -2.6
CCDC188H7C350 U7.5-201ENST00000517224 61 ntBASIC-1.17□□□□□ -2.6
CCDC188H7C350 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.18□□□□□ -2.6
CCDC188H7C350 RNU6-246P-201ENST00000384702 107 ntBASIC-1.18□□□□□ -2.6
CCDC188H7C350 MIR466-201ENST00000580653 84 ntBASIC-1.18□□□□□ -2.6
CCDC188H7C350 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.18□□□□□ -2.6
CCDC188H7C350 RNU6-44P-201ENST00000384045 107 ntBASIC-1.19□□□□□ -2.6
CCDC188H7C350 SNORD19-201ENST00000391191 68 ntBASIC-1.19□□□□□ -2.6
CCDC188H7C350 AL353691.2-201ENST00000443795 59 ntBASIC-1.19□□□□□ -2.6
CCDC188H7C350 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.19□□□□□ -2.6
CCDC188H7C350 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.19□□□□□ -2.6
CCDC188H7C350 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.2□□□□□ -2.6
CCDC188H7C350 RNU6-380P-201ENST00000410207 107 ntBASIC-1.2□□□□□ -2.6
CCDC188H7C350 AC018880.2-201ENST00000414265 201 ntBASIC-1.2□□□□□ -2.6
CCDC188H7C350 RNU7-174P-201ENST00000516248 59 ntBASIC-1.2□□□□□ -2.6
CCDC188H7C350 IGLL4P-201ENST00000614590 133 ntBASIC-1.2□□□□□ -2.6
CCDC188H7C350 MIR1297-201ENST00000637311 77 ntBASIC-1.2□□□□□ -2.6
CCDC188H7C350 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.21□□□□□ -2.6
CCDC188H7C350 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.21□□□□□ -2.6
CCDC188H7C350 MIR548W-201ENST00000581970 74 ntBASIC-1.21□□□□□ -2.6
CCDC188H7C350 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.22□□□□□ -2.6
CCDC188H7C350 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.22□□□□□ -2.6
CCDC188H7C350 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.22□□□□□ -2.6
CCDC188H7C350 RNU6-406P-201ENST00000516470 107 ntBASIC-1.22□□□□□ -2.6
CCDC188H7C350 MIR548AI-201ENST00000579940 88 ntBASIC-1.22□□□□□ -2.6
CCDC188H7C350 RNY1P1-201ENST00000364372 112 ntBASIC-1.23□□□□□ -2.61
CCDC188H7C350 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.23□□□□□ -2.61
CCDC188H7C350 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.23□□□□□ -2.61
CCDC188H7C350 RNU6-49P-201ENST00000384256 107 ntBASIC-1.23□□□□□ -2.61
CCDC188H7C350 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.23□□□□□ -2.61
CCDC188H7C350 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.24□□□□□ -2.61
CCDC188H7C350 RNU6-563P-201ENST00000364872 108 ntBASIC-1.24□□□□□ -2.61
CCDC188H7C350 RNU6-458P-201ENST00000384179 107 ntBASIC-1.24□□□□□ -2.61
CCDC188H7C350 RNA5SP89-201ENST00000410300 108 ntBASIC-1.24□□□□□ -2.61
CCDC188H7C350 snoU13.10-201ENST00000459301 103 ntBASIC-1.24□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 158.6 ms