Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 RNU6-887P-201ENST00000410660 100 ntBASIC-3.85□□□□□ -3.03
UBE2D4Q9Y2X8 SNORD127-201ENST00000458892 86 ntBASIC-3.85□□□□□ -3.03
UBE2D4Q9Y2X8 MIR7110-201ENST00000612638 86 ntBASIC-3.85□□□□□ -3.03
UBE2D4Q9Y2X8 Y_RNA.384-201ENST00000383909 102 ntBASIC-3.86□□□□□ -3.03
UBE2D4Q9Y2X8 Y_RNA.9-201ENST00000362354 101 ntBASIC-3.87□□□□□ -3.03
UBE2D4Q9Y2X8 Y_RNA.137-201ENST00000363455 112 ntBASIC-3.87□□□□□ -3.03
UBE2D4Q9Y2X8 MIR124-1-201ENST00000385275 85 ntBASIC-3.87□□□□□ -3.03
UBE2D4Q9Y2X8 Y_RNA.680-201ENST00000516441 93 ntBASIC-3.87□□□□□ -3.03
UBE2D4Q9Y2X8 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-3.87□□□□□ -3.03
UBE2D4Q9Y2X8 DLEU2_1.1-201ENST00000612089 120 ntBASIC-3.87□□□□□ -3.03
UBE2D4Q9Y2X8 RNU6-1128P-201ENST00000362825 109 ntBASIC-3.88□□□□□ -3.03
UBE2D4Q9Y2X8 SNORA63-201ENST00000363450 132 ntBASIC-3.88□□□□□ -3.03
UBE2D4Q9Y2X8 AC074348.1-201ENST00000426503 132 ntBASIC-3.88□□□□□ -3.03
UBE2D4Q9Y2X8 RNU6-303P-201ENST00000517091 106 ntBASIC-3.88□□□□□ -3.03
UBE2D4Q9Y2X8 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-3.88□□□□□ -3.03
UBE2D4Q9Y2X8 Y_RNA.19-201ENST00000362462 99 ntBASIC-3.89□□□□□ -3.03
UBE2D4Q9Y2X8 SNORD113.1-201ENST00000363280 73 ntBASIC-3.89□□□□□ -3.03
UBE2D4Q9Y2X8 SNORD116-10-201ENST00000363791 102 ntBASIC-3.89□□□□□ -3.03
UBE2D4Q9Y2X8 RNU4-40P-201ENST00000364351 143 ntBASIC-3.89□□□□□ -3.03
UBE2D4Q9Y2X8 SNORD37.2-201ENST00000391075 66 ntBASIC-3.89□□□□□ -3.03
UBE2D4Q9Y2X8 Y_RNA.292-201ENST00000364904 97 ntBASIC-3.9□□□□□ -3.03
UBE2D4Q9Y2X8 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-3.9□□□□□ -3.03
UBE2D4Q9Y2X8 SNORA40.4-201ENST00000390971 128 ntBASIC-3.9□□□□□ -3.03
UBE2D4Q9Y2X8 DEFB108C-201ENST00000400154 252 ntBASIC-3.9□□□□□ -3.03
UBE2D4Q9Y2X8 AL451105.1-201ENST00000450005 189 ntBASIC-3.9□□□□□ -3.03
UBE2D4Q9Y2X8 RNU7-30P-201ENST00000516835 62 ntBASIC-3.9□□□□□ -3.03
UBE2D4Q9Y2X8 SNORA40.15-201ENST00000516884 107 ntBASIC-3.9□□□□□ -3.03
UBE2D4Q9Y2X8 RNU6-789P-201ENST00000517105 102 ntBASIC-3.9□□□□□ -3.03
UBE2D4Q9Y2X8 MIR548AH-201ENST00000637109 76 ntBASIC-3.9□□□□□ -3.03
UBE2D4Q9Y2X8 MIR4643-201ENST00000577473 78 ntBASIC-3.91□□□□□ -3.04
UBE2D4Q9Y2X8 MIR4679-2-201ENST00000578358 77 ntBASIC-3.91□□□□□ -3.04
UBE2D4Q9Y2X8 RNU6-822P-201ENST00000362707 106 ntBASIC-3.92□□□□□ -3.04
UBE2D4Q9Y2X8 SNORD45.2-201ENST00000363552 72 ntBASIC-3.92□□□□□ -3.04
UBE2D4Q9Y2X8 RNU6-915P-201ENST00000364943 103 ntBASIC-3.92□□□□□ -3.04
UBE2D4Q9Y2X8 MIR1252-201ENST00000408861 65 ntBASIC-3.92□□□□□ -3.04
UBE2D4Q9Y2X8 Y_RNA.43-201ENST00000362670 111 ntBASIC-3.93□□□□□ -3.04
UBE2D4Q9Y2X8 RNU6-624P-201ENST00000363411 107 ntBASIC-3.93□□□□□ -3.04
UBE2D4Q9Y2X8 MIR656-201ENST00000385224 78 ntBASIC-3.93□□□□□ -3.04
UBE2D4Q9Y2X8 RNU6-231P-201ENST00000517122 103 ntBASIC-3.93□□□□□ -3.04
UBE2D4Q9Y2X8 RNU6-450P-201ENST00000364654 107 ntBASIC-3.94□□□□□ -3.04
UBE2D4Q9Y2X8 RNU6-742P-201ENST00000365289 107 ntBASIC-3.94□□□□□ -3.04
UBE2D4Q9Y2X8 RNU6-1042P-201ENST00000384204 107 ntBASIC-3.94□□□□□ -3.04
UBE2D4Q9Y2X8 SNORD116-29-201ENST00000384516 83 ntBASIC-3.94□□□□□ -3.04
UBE2D4Q9Y2X8 MIR3611-201ENST00000584484 83 ntBASIC-3.94□□□□□ -3.04
UBE2D4Q9Y2X8 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-3.94□□□□□ -3.04
UBE2D4Q9Y2X8 RNY4P14-201ENST00000363656 96 ntBASIC-3.95□□□□□ -3.04
UBE2D4Q9Y2X8 Y_RNA.532-201ENST00000384590 113 ntBASIC-3.95□□□□□ -3.04
UBE2D4Q9Y2X8 RNU6-823P-201ENST00000391042 103 ntBASIC-3.95□□□□□ -3.04
UBE2D4Q9Y2X8 Y_RNA.645-201ENST00000391229 102 ntBASIC-3.95□□□□□ -3.04
UBE2D4Q9Y2X8 RNU6-402P-201ENST00000410678 103 ntBASIC-3.95□□□□□ -3.04
UBE2D4Q9Y2X8 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-3.95□□□□□ -3.04
UBE2D4Q9Y2X8 TMSB4XP3-201ENST00000445144 114 ntBASIC-3.95□□□□□ -3.04
UBE2D4Q9Y2X8 MIR5009-201ENST00000578736 100 ntBASIC-3.95□□□□□ -3.04
UBE2D4Q9Y2X8 MTND4LP32-201ENST00000636111 270 ntBASIC-3.95□□□□□ -3.04
UBE2D4Q9Y2X8 Y_RNA.17-201ENST00000362433 111 ntBASIC-3.96□□□□□ -3.04
UBE2D4Q9Y2X8 Y_RNA.240-201ENST00000364469 95 ntBASIC-3.96□□□□□ -3.04
UBE2D4Q9Y2X8 MIR519C-201ENST00000385053 87 ntBASIC-3.96□□□□□ -3.04
UBE2D4Q9Y2X8 SNORA40B-201ENST00000385573 128 ntBASIC-3.96□□□□□ -3.04
UBE2D4Q9Y2X8 RNU6-460P-201ENST00000391158 108 ntBASIC-3.96□□□□□ -3.04
UBE2D4Q9Y2X8 SNORD116.2-201ENST00000391251 93 ntBASIC-3.96□□□□□ -3.04
UBE2D4Q9Y2X8 RNU7-197P-201ENST00000458836 62 ntBASIC-3.96□□□□□ -3.04
UBE2D4Q9Y2X8 RNU7-121P-201ENST00000516604 62 ntBASIC-3.96□□□□□ -3.04
UBE2D4Q9Y2X8 Y_RNA.382-201ENST00000365672 114 ntBASIC-3.97□□□□□ -3.04
UBE2D4Q9Y2X8 Y_RNA.553-201ENST00000384670 102 ntBASIC-3.97□□□□□ -3.04
UBE2D4Q9Y2X8 MIR620-201ENST00000385232 95 ntBASIC-3.97□□□□□ -3.04
UBE2D4Q9Y2X8 MIR1302-6-201ENST00000408466 90 ntBASIC-3.97□□□□□ -3.04
UBE2D4Q9Y2X8 AL158147.1-201ENST00000443970 75 ntBASIC-3.97□□□□□ -3.04
UBE2D4Q9Y2X8 AC139453.2-201ENST00000487255 133 ntBASIC-3.97□□□□□ -3.04
UBE2D4Q9Y2X8 Y_RNA.718-201ENST00000517110 102 ntBASIC-3.97□□□□□ -3.04
UBE2D4Q9Y2X8 RNU6-876P-201ENST00000391295 104 ntBASIC-3.98□□□□□ -3.05
UBE2D4Q9Y2X8 DNAJC19P2-201ENST00000593340 302 ntBASIC-3.98□□□□□ -3.05
UBE2D4Q9Y2X8 MIR8053-201ENST00000613344 75 ntBASIC-3.98□□□□□ -3.05
UBE2D4Q9Y2X8 Y_RNA.259-201ENST00000364619 101 ntBASIC-3.99□□□□□ -3.05
UBE2D4Q9Y2X8 SNORD45A-201ENST00000384512 84 ntBASIC-3.99□□□□□ -3.05
UBE2D4Q9Y2X8 AC062037.1-201ENST00000605302 128 ntBASIC-3.99□□□□□ -3.05
UBE2D4Q9Y2X8 RNU6-239P-201ENST00000390990 99 ntBASIC-4□□□□□ -3.05
UBE2D4Q9Y2X8 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-4□□□□□ -3.05
UBE2D4Q9Y2X8 Y_RNA.276-201ENST00000364732 109 ntBASIC-4.01□□□□□ -3.05
UBE2D4Q9Y2X8 RNA5SP224-201ENST00000365069 126 ntBASIC-4.02□□□□□ -3.05
UBE2D4Q9Y2X8 SNORD58C-201ENST00000365223 64 ntBASIC-4.02□□□□□ -3.05
UBE2D4Q9Y2X8 RNU6-1340P-201ENST00000384438 107 ntBASIC-4.02□□□□□ -3.05
UBE2D4Q9Y2X8 RNU6-557P-201ENST00000516842 110 ntBASIC-4.02□□□□□ -3.05
UBE2D4Q9Y2X8 SNORA40.16-201ENST00000517238 121 ntBASIC-4.02□□□□□ -3.05
UBE2D4Q9Y2X8 AC006362.1-201ENST00000567392 174 ntBASIC-4.02□□□□□ -3.05
UBE2D4Q9Y2X8 Y_RNA.187-201ENST00000363918 113 ntBASIC-4.03□□□□□ -3.05
UBE2D4Q9Y2X8 RNU6-574P-201ENST00000384265 107 ntBASIC-4.03□□□□□ -3.05
UBE2D4Q9Y2X8 RNU7-152P-201ENST00000458982 64 ntBASIC-4.03□□□□□ -3.05
UBE2D4Q9Y2X8 RNU6-92P-201ENST00000605893 104 ntBASIC-4.03□□□□□ -3.05
UBE2D4Q9Y2X8 Y_RNA.96-201ENST00000363092 109 ntBASIC-4.04□□□□□ -3.06
UBE2D4Q9Y2X8 Y_RNA.218-201ENST00000364218 104 ntBASIC-4.04□□□□□ -3.06
UBE2D4Q9Y2X8 SNORD45C-201ENST00000383893 79 ntBASIC-4.04□□□□□ -3.06
UBE2D4Q9Y2X8 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-4.04□□□□□ -3.06
UBE2D4Q9Y2X8 AC113139.1-201ENST00000605049 239 ntBASIC-4.04□□□□□ -3.06
UBE2D4Q9Y2X8 AP001318.4-201ENST00000616637 121 ntBASIC-4.04□□□□□ -3.06
UBE2D4Q9Y2X8 SNORD60.1-201ENST00000362451 73 ntBASIC-4.05□□□□□ -3.06
UBE2D4Q9Y2X8 SCARNA23-201ENST00000516060 130 ntBASIC-4.05□□□□□ -3.06
UBE2D4Q9Y2X8 AC020661.2-201ENST00000560114 134 ntBASIC-4.05□□□□□ -3.06
UBE2D4Q9Y2X8 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-4.05□□□□□ -3.06
UBE2D4Q9Y2X8 SNORA63.4-201ENST00000362763 126 ntBASIC-4.06□□□□□ -3.06
UBE2D4Q9Y2X8 Y_RNA.260-201ENST00000364628 101 ntBASIC-4.06□□□□□ -3.06
Retrieved 100 of 98,524 protein–RNA pairs in 188 ms