Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 Y_RNA.443-201ENST00000384135 111 ntBASIC-3.23□□□□□ -2.93
VPS25Q9BRG1 RNU6-1191P-201ENST00000516799 107 ntBASIC-3.23□□□□□ -2.93
VPS25Q9BRG1 MIR3675-201ENST00000583661 73 ntBASIC-3.23□□□□□ -2.93
VPS25Q9BRG1 SNORA8.1-201ENST00000384250 140 ntBASIC-3.24□□□□□ -2.93
VPS25Q9BRG1 RNU6-1135P-201ENST00000411083 103 ntBASIC-3.24□□□□□ -2.93
VPS25Q9BRG1 RNU6-772P-201ENST00000516042 105 ntBASIC-3.24□□□□□ -2.93
VPS25Q9BRG1 SCARNA23-201ENST00000516060 130 ntBASIC-3.24□□□□□ -2.93
VPS25Q9BRG1 MIR3171-201ENST00000584270 74 ntBASIC-3.24□□□□□ -2.93
VPS25Q9BRG1 Y_RNA.200-201ENST00000364018 102 ntBASIC-3.25□□□□□ -2.93
VPS25Q9BRG1 RNU6-574P-201ENST00000384265 107 ntBASIC-3.25□□□□□ -2.93
VPS25Q9BRG1 RNU6-523P-201ENST00000516304 54 ntBASIC-3.25□□□□□ -2.93
VPS25Q9BRG1 MIR7978-201ENST00000636158 59 ntBASIC-3.25□□□□□ -2.93
VPS25Q9BRG1 RNU6-230P-201ENST00000362457 104 ntBASIC-3.26□□□□□ -2.93
VPS25Q9BRG1 SNORD45.1-201ENST00000363181 77 ntBASIC-3.26□□□□□ -2.93
VPS25Q9BRG1 Y_RNA.264-201ENST00000364665 102 ntBASIC-3.26□□□□□ -2.93
VPS25Q9BRG1 RNU6-1227P-201ENST00000383981 107 ntBASIC-3.26□□□□□ -2.93
VPS25Q9BRG1 Y_RNA.574-201ENST00000384766 95 ntBASIC-3.26□□□□□ -2.93
VPS25Q9BRG1 Y_RNA.649-201ENST00000459077 103 ntBASIC-3.26□□□□□ -2.93
VPS25Q9BRG1 RNU7-61P-201ENST00000515897 61 ntBASIC-3.26□□□□□ -2.93
VPS25Q9BRG1 AC134503.1-201ENST00000633048 54 ntBASIC-3.26□□□□□ -2.93
VPS25Q9BRG1 AL157777.2-201ENST00000258070 137 ntBASIC-3.27□□□□□ -2.93
VPS25Q9BRG1 RNU4-40P-201ENST00000364351 143 ntBASIC-3.27□□□□□ -2.93
VPS25Q9BRG1 Y_RNA.397-201ENST00000383950 98 ntBASIC-3.27□□□□□ -2.93
VPS25Q9BRG1 RNU6-162P-201ENST00000516228 103 ntBASIC-3.27□□□□□ -2.93
VPS25Q9BRG1 Y_RNA.313-201ENST00000365095 103 ntBASIC-3.28□□□□□ -2.93
VPS25Q9BRG1 Y_RNA.513-201ENST00000384522 100 ntBASIC-3.28□□□□□ -2.93
VPS25Q9BRG1 RNU6-111P-201ENST00000517179 105 ntBASIC-3.28□□□□□ -2.93
VPS25Q9BRG1 U6atac.1-201ENST00000616025 117 ntBASIC-3.28□□□□□ -2.93
VPS25Q9BRG1 MIRLET7A2-201ENST00000362105 72 ntBASIC-3.29□□□□□ -2.94
VPS25Q9BRG1 Y_RNA.240-201ENST00000364469 95 ntBASIC-3.29□□□□□ -2.94
VPS25Q9BRG1 Y_RNA.680-201ENST00000516441 93 ntBASIC-3.29□□□□□ -2.94
VPS25Q9BRG1 MIR548X2-201ENST00000579776 100 ntBASIC-3.29□□□□□ -2.94
VPS25Q9BRG1 Y_RNA.349-201ENST00000365406 102 ntBASIC-3.3□□□□□ -2.94
VPS25Q9BRG1 MIR519C-201ENST00000385053 87 ntBASIC-3.3□□□□□ -2.94
VPS25Q9BRG1 RNU6-172P-201ENST00000411000 93 ntBASIC-3.3□□□□□ -2.94
VPS25Q9BRG1 RNU6-904P-201ENST00000516206 101 ntBASIC-3.3□□□□□ -2.94
VPS25Q9BRG1 AC072026.1-201ENST00000605023 201 ntBASIC-3.3□□□□□ -2.94
VPS25Q9BRG1 SNORD116-18-201ENST00000383961 92 ntBASIC-3.31□□□□□ -2.94
VPS25Q9BRG1 MIR125B1-201ENST00000385236 88 ntBASIC-3.32□□□□□ -2.94
VPS25Q9BRG1 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-3.32□□□□□ -2.94
VPS25Q9BRG1 RNU6-141P-201ENST00000410499 105 ntBASIC-3.32□□□□□ -2.94
VPS25Q9BRG1 AC020661.2-201ENST00000560114 134 ntBASIC-3.32□□□□□ -2.94
VPS25Q9BRG1 MIR3128-201ENST00000581957 66 ntBASIC-3.32□□□□□ -2.94
VPS25Q9BRG1 MIR202-201ENST00000362219 110 ntBASIC-3.33□□□□□ -2.94
VPS25Q9BRG1 Y_RNA.459-201ENST00000384251 102 ntBASIC-3.33□□□□□ -2.94
VPS25Q9BRG1 RNY4P18-201ENST00000391107 89 ntBASIC-3.33□□□□□ -2.94
VPS25Q9BRG1 Y_RNA.96-201ENST00000363092 109 ntBASIC-3.34□□□□□ -2.94
VPS25Q9BRG1 Y_RNA.139-201ENST00000363464 102 ntBASIC-3.34□□□□□ -2.94
VPS25Q9BRG1 RNU6-694P-201ENST00000364071 147 ntBASIC-3.35□□□□□ -2.95
VPS25Q9BRG1 RNY1P1-201ENST00000364372 112 ntBASIC-3.35□□□□□ -2.95
VPS25Q9BRG1 SNORD113-3-201ENST00000364830 72 ntBASIC-3.35□□□□□ -2.95
VPS25Q9BRG1 MIR569-201ENST00000385228 96 ntBASIC-3.35□□□□□ -2.95
VPS25Q9BRG1 Y_RNA.629-201ENST00000411368 105 ntBASIC-3.35□□□□□ -2.95
VPS25Q9BRG1 Y_RNA.186-201ENST00000363899 92 ntBASIC-3.36□□□□□ -2.95
VPS25Q9BRG1 RNU6-649P-201ENST00000384463 107 ntBASIC-3.36□□□□□ -2.95
VPS25Q9BRG1 MTND4LP1-201ENST00000446263 157 ntBASIC-3.36□□□□□ -2.95
VPS25Q9BRG1 U7.3-201ENST00000616123 62 ntBASIC-3.36□□□□□ -2.95
VPS25Q9BRG1 RNU6-1283P-201ENST00000365314 105 ntBASIC-3.37□□□□□ -2.95
VPS25Q9BRG1 RNU6-520P-201ENST00000384717 104 ntBASIC-3.37□□□□□ -2.95
VPS25Q9BRG1 RNU7-107P-201ENST00000459121 61 ntBASIC-3.37□□□□□ -2.95
VPS25Q9BRG1 SNORD33.1-201ENST00000516213 88 ntBASIC-3.37□□□□□ -2.95
VPS25Q9BRG1 RNU6-303P-201ENST00000517091 106 ntBASIC-3.37□□□□□ -2.95
VPS25Q9BRG1 RNA5SP215-201ENST00000363440 122 ntBASIC-3.38□□□□□ -2.95
VPS25Q9BRG1 Y_RNA.202-201ENST00000364083 110 ntBASIC-3.38□□□□□ -2.95
VPS25Q9BRG1 RNU6-668P-201ENST00000364180 107 ntBASIC-3.38□□□□□ -2.95
VPS25Q9BRG1 RNU6-1324P-201ENST00000384222 107 ntBASIC-3.38□□□□□ -2.95
VPS25Q9BRG1 Y_RNA.204-201ENST00000364112 102 ntBASIC-3.39□□□□□ -2.95
VPS25Q9BRG1 Y_RNA.478-201ENST00000384358 107 ntBASIC-3.39□□□□□ -2.95
VPS25Q9BRG1 Y_RNA.519-201ENST00000384553 102 ntBASIC-3.39□□□□□ -2.95
VPS25Q9BRG1 RNU6-1211P-201ENST00000459179 105 ntBASIC-3.39□□□□□ -2.95
VPS25Q9BRG1 Y_RNA.662-201ENST00000516028 97 ntBASIC-3.39□□□□□ -2.95
VPS25Q9BRG1 RNY4-201ENST00000516507 96 ntBASIC-3.39□□□□□ -2.95
VPS25Q9BRG1 SNX3P1Y-201ENST00000615757 176 ntBASIC-3.39□□□□□ -2.95
VPS25Q9BRG1 RNU6-624P-201ENST00000363411 107 ntBASIC-3.4□□□□□ -2.95
VPS25Q9BRG1 Y_RNA.321-201ENST00000365149 102 ntBASIC-3.4□□□□□ -2.95
VPS25Q9BRG1 Y_RNA.350-201ENST00000365409 98 ntBASIC-3.4□□□□□ -2.95
VPS25Q9BRG1 SNORD60-201ENST00000383903 83 ntBASIC-3.4□□□□□ -2.95
VPS25Q9BRG1 RNU6-182P-201ENST00000516970 105 ntBASIC-3.4□□□□□ -2.95
VPS25Q9BRG1 Y_RNA.291-201ENST00000364886 113 ntBASIC-3.41□□□□□ -2.96
VPS25Q9BRG1 RNU6-106P-201ENST00000384405 107 ntBASIC-3.41□□□□□ -2.96
VPS25Q9BRG1 Y_RNA.532-201ENST00000384590 113 ntBASIC-3.41□□□□□ -2.96
VPS25Q9BRG1 MIR548F4-201ENST00000408515 105 ntBASIC-3.41□□□□□ -2.96
VPS25Q9BRG1 MIR548N-201ENST00000408742 75 ntBASIC-3.41□□□□□ -2.96
VPS25Q9BRG1 SNORD115-37-201ENST00000363768 82 ntBASIC-3.42□□□□□ -2.96
VPS25Q9BRG1 AC074348.1-201ENST00000426503 132 ntBASIC-3.42□□□□□ -2.96
VPS25Q9BRG1 RNU6-1079P-201ENST00000362861 110 ntBASIC-3.43□□□□□ -2.96
VPS25Q9BRG1 RNA5SP173-201ENST00000364857 136 ntBASIC-3.43□□□□□ -2.96
VPS25Q9BRG1 Y_RNA.307-201ENST00000365022 117 ntBASIC-3.43□□□□□ -2.96
VPS25Q9BRG1 Y_RNA.509-201ENST00000384506 99 ntBASIC-3.43□□□□□ -2.96
VPS25Q9BRG1 MIR590-201ENST00000385008 97 ntBASIC-3.43□□□□□ -2.96
VPS25Q9BRG1 Y_RNA.580-201ENST00000391004 95 ntBASIC-3.43□□□□□ -2.96
VPS25Q9BRG1 Y_RNA.586-201ENST00000391146 98 ntBASIC-3.43□□□□□ -2.96
VPS25Q9BRG1 MT-TD-201ENST00000387419 68 ntBASIC-3.44□□□□□ -2.96
VPS25Q9BRG1 MTND5P20-201ENST00000448677 143 ntBASIC-3.44□□□□□ -2.96
VPS25Q9BRG1 MIR4484-201ENST00000582855 83 ntBASIC-3.44□□□□□ -2.96
VPS25Q9BRG1 Y_RNA.281-201ENST00000364774 94 ntBASIC-3.45□□□□□ -2.96
VPS25Q9BRG1 Y_RNA.702-201ENST00000516843 96 ntBASIC-3.45□□□□□ -2.96
VPS25Q9BRG1 Y_RNA.47-201ENST00000362697 108 ntBASIC-3.46□□□□□ -2.96
VPS25Q9BRG1 SNORD113.1-201ENST00000363280 73 ntBASIC-3.46□□□□□ -2.96
VPS25Q9BRG1 SNORA20.1-201ENST00000364790 130 ntBASIC-3.46□□□□□ -2.96
Retrieved 100 of 98,524 protein–RNA pairs in 219.5 ms