Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 MIR8062-201ENST00000621515 85 ntBASIC-3.07□□□□□ -2.9
TRAV1-2A0A0B4J238 MIRLET7A2-201ENST00000362105 72 ntBASIC-3.08□□□□□ -2.9
TRAV1-2A0A0B4J238 Y_RNA.233-201ENST00000364407 101 ntBASIC-3.08□□□□□ -2.9
TRAV1-2A0A0B4J238 Y_RNA.321-201ENST00000365149 102 ntBASIC-3.09□□□□□ -2.9
TRAV1-2A0A0B4J238 SNORD60-201ENST00000383903 83 ntBASIC-3.09□□□□□ -2.9
TRAV1-2A0A0B4J238 MIR548N-201ENST00000408742 75 ntBASIC-3.09□□□□□ -2.9
TRAV1-2A0A0B4J238 RNU6-330P-201ENST00000363015 107 ntBASIC-3.1□□□□□ -2.91
TRAV1-2A0A0B4J238 RNA5SP215-201ENST00000363440 122 ntBASIC-3.1□□□□□ -2.91
TRAV1-2A0A0B4J238 RNU6-974P-201ENST00000384099 108 ntBASIC-3.1□□□□□ -2.91
TRAV1-2A0A0B4J238 RNU6-1108P-201ENST00000516308 104 ntBASIC-3.1□□□□□ -2.91
TRAV1-2A0A0B4J238 Y_RNA.420-201ENST00000384043 110 ntBASIC-3.11□□□□□ -2.91
TRAV1-2A0A0B4J238 RNU6-474P-201ENST00000384243 107 ntBASIC-3.11□□□□□ -2.91
TRAV1-2A0A0B4J238 MIR579-201ENST00000385221 98 ntBASIC-3.11□□□□□ -2.91
TRAV1-2A0A0B4J238 RNU6-604P-201ENST00000390917 100 ntBASIC-3.11□□□□□ -2.91
TRAV1-2A0A0B4J238 RNU6-1061P-201ENST00000516530 99 ntBASIC-3.11□□□□□ -2.91
TRAV1-2A0A0B4J238 RNU6-1137P-201ENST00000517073 99 ntBASIC-3.11□□□□□ -2.91
TRAV1-2A0A0B4J238 Y_RNA.96-201ENST00000363092 109 ntBASIC-3.12□□□□□ -2.91
TRAV1-2A0A0B4J238 SNORD113-3-201ENST00000364830 72 ntBASIC-3.12□□□□□ -2.91
TRAV1-2A0A0B4J238 RNY4P18-201ENST00000391107 89 ntBASIC-3.12□□□□□ -2.91
TRAV1-2A0A0B4J238 RNU6-1135P-201ENST00000411083 103 ntBASIC-3.12□□□□□ -2.91
TRAV1-2A0A0B4J238 MIR5693-201ENST00000577722 73 ntBASIC-3.12□□□□□ -2.91
TRAV1-2A0A0B4J238 U7.2-201ENST00000607576 63 ntBASIC-3.12□□□□□ -2.91
TRAV1-2A0A0B4J238 RNU6-1020P-201ENST00000363684 107 ntBASIC-3.13□□□□□ -2.91
TRAV1-2A0A0B4J238 Y_RNA.398-201ENST00000383952 99 ntBASIC-3.13□□□□□ -2.91
TRAV1-2A0A0B4J238 AC141273.2-201ENST00000618989 130 ntBASIC-3.13□□□□□ -2.91
TRAV1-2A0A0B4J238 RNU6-1324P-201ENST00000384222 107 ntBASIC-3.14□□□□□ -2.91
TRAV1-2A0A0B4J238 RNU6-520P-201ENST00000384717 104 ntBASIC-3.14□□□□□ -2.91
TRAV1-2A0A0B4J238 AC022559.1-201ENST00000520905 205 ntBASIC-3.14□□□□□ -2.91
TRAV1-2A0A0B4J238 SNORA33.2-201ENST00000365413 134 ntBASIC-3.15□□□□□ -2.91
TRAV1-2A0A0B4J238 RNU6-1227P-201ENST00000383981 107 ntBASIC-3.15□□□□□ -2.91
TRAV1-2A0A0B4J238 Y_RNA.509-201ENST00000384506 99 ntBASIC-3.15□□□□□ -2.91
TRAV1-2A0A0B4J238 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-3.15□□□□□ -2.91
TRAV1-2A0A0B4J238 RNU6-985P-201ENST00000410182 104 ntBASIC-3.15□□□□□ -2.91
TRAV1-2A0A0B4J238 SCARNA23-201ENST00000516060 130 ntBASIC-3.15□□□□□ -2.91
TRAV1-2A0A0B4J238 RNU6-182P-201ENST00000516970 105 ntBASIC-3.15□□□□□ -2.91
TRAV1-2A0A0B4J238 SNORD45.1-201ENST00000363181 77 ntBASIC-3.16□□□□□ -2.92
TRAV1-2A0A0B4J238 MIR513C-201ENST00000401352 84 ntBASIC-3.16□□□□□ -2.92
TRAV1-2A0A0B4J238 RNU6-172P-201ENST00000411000 93 ntBASIC-3.16□□□□□ -2.92
TRAV1-2A0A0B4J238 MIR202-201ENST00000362219 110 ntBASIC-3.17□□□□□ -2.92
TRAV1-2A0A0B4J238 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-3.17□□□□□ -2.92
TRAV1-2A0A0B4J238 RNU6-834P-201ENST00000362367 110 ntBASIC-3.18□□□□□ -2.92
TRAV1-2A0A0B4J238 Y_RNA.20-201ENST00000362479 113 ntBASIC-3.18□□□□□ -2.92
TRAV1-2A0A0B4J238 Y_RNA.79-201ENST00000362992 113 ntBASIC-3.18□□□□□ -2.92
TRAV1-2A0A0B4J238 Y_RNA.139-201ENST00000363464 102 ntBASIC-3.18□□□□□ -2.92
TRAV1-2A0A0B4J238 RNA5SP173-201ENST00000364857 136 ntBASIC-3.18□□□□□ -2.92
TRAV1-2A0A0B4J238 MTND4LP1-201ENST00000446263 157 ntBASIC-3.18□□□□□ -2.92
TRAV1-2A0A0B4J238 RNU4-71P-201ENST00000516258 113 ntBASIC-3.18□□□□□ -2.92
TRAV1-2A0A0B4J238 Y_RNA.778-201ENST00000620203 90 ntBASIC-3.18□□□□□ -2.92
TRAV1-2A0A0B4J238 Y_RNA.59-201ENST00000362828 102 ntBASIC-3.19□□□□□ -2.92
TRAV1-2A0A0B4J238 RNU6-623P-201ENST00000363143 105 ntBASIC-3.19□□□□□ -2.92
TRAV1-2A0A0B4J238 RNU6-624P-201ENST00000363411 107 ntBASIC-3.19□□□□□ -2.92
TRAV1-2A0A0B4J238 Y_RNA.134-201ENST00000363435 105 ntBASIC-3.19□□□□□ -2.92
TRAV1-2A0A0B4J238 Y_RNA.356-201ENST00000365475 113 ntBASIC-3.19□□□□□ -2.92
TRAV1-2A0A0B4J238 SNORA8.1-201ENST00000384250 140 ntBASIC-3.19□□□□□ -2.92
TRAV1-2A0A0B4J238 RNU6-574P-201ENST00000384265 107 ntBASIC-3.19□□□□□ -2.92
TRAV1-2A0A0B4J238 MIR519C-201ENST00000385053 87 ntBASIC-3.19□□□□□ -2.92
TRAV1-2A0A0B4J238 RNU6-303P-201ENST00000517091 106 ntBASIC-3.19□□□□□ -2.92
TRAV1-2A0A0B4J238 Y_RNA.272-201ENST00000364696 102 ntBASIC-3.2□□□□□ -2.92
TRAV1-2A0A0B4J238 RNU6-649P-201ENST00000384463 107 ntBASIC-3.2□□□□□ -2.92
TRAV1-2A0A0B4J238 RNU6-129P-201ENST00000391022 107 ntBASIC-3.2□□□□□ -2.92
TRAV1-2A0A0B4J238 SNORA17.4-201ENST00000391287 132 ntBASIC-3.2□□□□□ -2.92
TRAV1-2A0A0B4J238 RNU6-106P-201ENST00000384405 107 ntBASIC-3.21□□□□□ -2.92
TRAV1-2A0A0B4J238 Y_RNA.511-201ENST00000384514 103 ntBASIC-3.22□□□□□ -2.92
TRAV1-2A0A0B4J238 AC074348.1-201ENST00000426503 132 ntBASIC-3.22□□□□□ -2.92
TRAV1-2A0A0B4J238 RNU6-904P-201ENST00000516206 101 ntBASIC-3.22□□□□□ -2.92
TRAV1-2A0A0B4J238 RNU6-668P-201ENST00000364180 107 ntBASIC-3.23□□□□□ -2.93
TRAV1-2A0A0B4J238 RNU4-40P-201ENST00000364351 143 ntBASIC-3.23□□□□□ -2.93
TRAV1-2A0A0B4J238 RNU6-361P-201ENST00000364454 107 ntBASIC-3.23□□□□□ -2.93
TRAV1-2A0A0B4J238 Y_RNA.240-201ENST00000364469 95 ntBASIC-3.23□□□□□ -2.93
TRAV1-2A0A0B4J238 AL589823.1-201ENST00000429577 183 ntBASIC-3.23□□□□□ -2.93
TRAV1-2A0A0B4J238 RNU6-635P-201ENST00000516651 102 ntBASIC-3.23□□□□□ -2.93
TRAV1-2A0A0B4J238 MIR4795-201ENST00000584182 89 ntBASIC-3.23□□□□□ -2.93
TRAV1-2A0A0B4J238 MIR379-201ENST00000362218 67 ntBASIC-3.24□□□□□ -2.93
TRAV1-2A0A0B4J238 RNU6-912P-201ENST00000363800 104 ntBASIC-3.24□□□□□ -2.93
TRAV1-2A0A0B4J238 Y_RNA.649-201ENST00000459077 103 ntBASIC-3.24□□□□□ -2.93
TRAV1-2A0A0B4J238 Y_RNA.431-201ENST00000384086 102 ntBASIC-3.25□□□□□ -2.93
TRAV1-2A0A0B4J238 Y_RNA.459-201ENST00000384251 102 ntBASIC-3.25□□□□□ -2.93
TRAV1-2A0A0B4J238 RNU6-875P-201ENST00000516488 106 ntBASIC-3.25□□□□□ -2.93
TRAV1-2A0A0B4J238 RNU7-160P-201ENST00000516660 62 ntBASIC-3.25□□□□□ -2.93
TRAV1-2A0A0B4J238 AC072026.1-201ENST00000605023 201 ntBASIC-3.25□□□□□ -2.93
TRAV1-2A0A0B4J238 AP000770.2-201ENST00000623694 100 ntBASIC-3.25□□□□□ -2.93
TRAV1-2A0A0B4J238 AL157777.2-201ENST00000258070 137 ntBASIC-3.26□□□□□ -2.93
TRAV1-2A0A0B4J238 Y_RNA.200-201ENST00000364018 102 ntBASIC-3.26□□□□□ -2.93
TRAV1-2A0A0B4J238 Y_RNA.307-201ENST00000365022 117 ntBASIC-3.26□□□□□ -2.93
TRAV1-2A0A0B4J238 RNU6-772P-201ENST00000516042 105 ntBASIC-3.26□□□□□ -2.93
TRAV1-2A0A0B4J238 MIR548X2-201ENST00000579776 100 ntBASIC-3.26□□□□□ -2.93
TRAV1-2A0A0B4J238 RNU7-61P-201ENST00000515897 61 ntBASIC-3.27□□□□□ -2.93
TRAV1-2A0A0B4J238 RNU6-68P-201ENST00000516576 104 ntBASIC-3.27□□□□□ -2.93
TRAV1-2A0A0B4J238 RNU6-557P-201ENST00000516842 110 ntBASIC-3.27□□□□□ -2.93
TRAV1-2A0A0B4J238 RNU6-530P-201ENST00000391180 107 ntBASIC-3.28□□□□□ -2.93
TRAV1-2A0A0B4J238 Y_RNA.680-201ENST00000516441 93 ntBASIC-3.28□□□□□ -2.93
TRAV1-2A0A0B4J238 MTND4P29-201ENST00000503122 1372 ntBASIC-3.28□□□□□ -2.93
TRAV1-2A0A0B4J238 Y_RNA.69-201ENST00000362885 109 ntBASIC-3.29□□□□□ -2.94
TRAV1-2A0A0B4J238 RNU6-1277P-201ENST00000364561 107 ntBASIC-3.29□□□□□ -2.94
TRAV1-2A0A0B4J238 RNY4P25-201ENST00000459254 96 ntBASIC-3.29□□□□□ -2.94
TRAV1-2A0A0B4J238 AC134503.1-201ENST00000633048 54 ntBASIC-3.29□□□□□ -2.94
TRAV1-2A0A0B4J238 SNORD115-37-201ENST00000363768 82 ntBASIC-3.3□□□□□ -2.94
TRAV1-2A0A0B4J238 Y_RNA.216-201ENST00000364205 93 ntBASIC-3.3□□□□□ -2.94
TRAV1-2A0A0B4J238 Y_RNA.580-201ENST00000391004 95 ntBASIC-3.3□□□□□ -2.94
TRAV1-2A0A0B4J238 MIR548AJ2-201ENST00000408539 92 ntBASIC-3.3□□□□□ -2.94
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms