Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 RNU7-129P-201ENST00000516128 62 ntBASIC0.85□□□□□ -2.27
SYNGAP1Q96PV0 U7.6-201ENST00000610841 64 ntBASIC0.85□□□□□ -2.27
SYNGAP1Q96PV0 MIR6866-201ENST00000638146 69 ntBASIC0.85□□□□□ -2.27
SYNGAP1Q96PV0 MIR508-201ENST00000384857 115 ntBASIC0.84□□□□□ -2.28
SYNGAP1Q96PV0 Y_RNA.125-201ENST00000363371 111 ntBASIC0.83□□□□□ -2.28
SYNGAP1Q96PV0 RNA5SP215-201ENST00000363440 122 ntBASIC0.83□□□□□ -2.28
SYNGAP1Q96PV0 RNA5SP67-201ENST00000516422 131 ntBASIC0.83□□□□□ -2.28
SYNGAP1Q96PV0 MIR20A-201ENST00000362279 71 ntBASIC0.82□□□□□ -2.28
SYNGAP1Q96PV0 MIR630-201ENST00000384957 97 ntBASIC0.82□□□□□ -2.28
SYNGAP1Q96PV0 MIR1468-201ENST00000410600 86 ntBASIC0.82□□□□□ -2.28
SYNGAP1Q96PV0 RNU6-1232P-201ENST00000516299 86 ntBASIC0.82□□□□□ -2.28
SYNGAP1Q96PV0 RNU1-29P-201ENST00000606574 126 ntBASIC0.82□□□□□ -2.28
SYNGAP1Q96PV0 RNU6-302P-201ENST00000365249 107 ntBASIC0.81□□□□□ -2.28
SYNGAP1Q96PV0 MIR146A-201ENST00000385201 99 ntBASIC0.81□□□□□ -2.28
SYNGAP1Q96PV0 MIR760-201ENST00000390220 80 ntBASIC0.81□□□□□ -2.28
SYNGAP1Q96PV0 AC023932.2-201ENST00000603176 175 ntBASIC0.81□□□□□ -2.28
SYNGAP1Q96PV0 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
SYNGAP1Q96PV0 RNA5SP266-201ENST00000410273 108 ntBASIC0.8□□□□□ -2.28
SYNGAP1Q96PV0 SNORD114-29-201ENST00000364819 70 ntBASIC0.79□□□□□ -2.28
SYNGAP1Q96PV0 Y_RNA.457-201ENST00000384237 111 ntBASIC0.79□□□□□ -2.28
SYNGAP1Q96PV0 MIR517B-201ENST00000385102 67 ntBASIC0.79□□□□□ -2.28
SYNGAP1Q96PV0 RNU6-758P-201ENST00000516292 89 ntBASIC0.79□□□□□ -2.28
SYNGAP1Q96PV0 RNU7-188P-201ENST00000517063 64 ntBASIC0.79□□□□□ -2.28
SYNGAP1Q96PV0 AC243829.6-201ENST00000612652 106 ntBASIC0.79□□□□□ -2.28
SYNGAP1Q96PV0 AC084368.1-201ENST00000620935 65 ntBASIC0.79□□□□□ -2.28
SYNGAP1Q96PV0 RNA5SP192-201ENST00000364404 120 ntBASIC0.78□□□□□ -2.28
SYNGAP1Q96PV0 AC110620.1-201ENST00000416042 228 ntBASIC0.78□□□□□ -2.28
SYNGAP1Q96PV0 AC244090.1-201ENST00000441884 93 ntBASIC0.78□□□□□ -2.28
SYNGAP1Q96PV0 Y_RNA.633-201ENST00000459107 95 ntBASIC0.78□□□□□ -2.28
SYNGAP1Q96PV0 SNORA25.5-201ENST00000363782 126 ntBASIC0.77□□□□□ -2.29
SYNGAP1Q96PV0 SCARNA21.1-201ENST00000515996 128 ntBASIC0.77□□□□□ -2.29
SYNGAP1Q96PV0 MIR4802-201ENST00000581881 80 ntBASIC0.77□□□□□ -2.29
SYNGAP1Q96PV0 MIR499B-201ENST00000636498 73 ntBASIC0.76□□□□□ -2.29
SYNGAP1Q96PV0 RNU6-945P-201ENST00000383947 107 ntBASIC0.75□□□□□ -2.29
SYNGAP1Q96PV0 CYP3A54P-201ENST00000566950 75 ntBASIC0.75□□□□□ -2.29
SYNGAP1Q96PV0 U2.7-201ENST00000619197 100 ntBASIC0.75□□□□□ -2.29
SYNGAP1Q96PV0 MIR6755-201ENST00000619993 66 ntBASIC0.75□□□□□ -2.29
SYNGAP1Q96PV0 SNORD113-2-201ENST00000391082 72 ntBASIC0.74□□□□□ -2.29
SYNGAP1Q96PV0 MIR4514-201ENST00000581410 57 ntBASIC0.74□□□□□ -2.29
SYNGAP1Q96PV0 MIR5087-201ENST00000635826 76 ntBASIC0.74□□□□□ -2.29
SYNGAP1Q96PV0 RNA5SP98-201ENST00000363158 137 ntBASIC0.73□□□□□ -2.29
SYNGAP1Q96PV0 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.73□□□□□ -2.29
SYNGAP1Q96PV0 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.73□□□□□ -2.29
SYNGAP1Q96PV0 MIR466-201ENST00000580653 84 ntBASIC0.73□□□□□ -2.29
SYNGAP1Q96PV0 MIR4677-201ENST00000584153 80 ntBASIC0.73□□□□□ -2.29
SYNGAP1Q96PV0 RNA5SP368-201ENST00000364298 116 ntBASIC0.72□□□□□ -2.29
SYNGAP1Q96PV0 RNU6-499P-201ENST00000365615 107 ntBASIC0.72□□□□□ -2.29
SYNGAP1Q96PV0 MIR633-201ENST00000384821 98 ntBASIC0.72□□□□□ -2.29
SYNGAP1Q96PV0 MIR501-201ENST00000390204 84 ntBASIC0.72□□□□□ -2.29
SYNGAP1Q96PV0 RNU6-92P-201ENST00000605893 104 ntBASIC0.72□□□□□ -2.29
SYNGAP1Q96PV0 MTND4LP19-201ENST00000403051 166 ntBASIC0.71□□□□□ -2.3
SYNGAP1Q96PV0 RNU6-940P-201ENST00000363433 104 ntBASIC0.7□□□□□ -2.3
SYNGAP1Q96PV0 RNA5SP128-201ENST00000365305 116 ntBASIC0.7□□□□□ -2.3
SYNGAP1Q96PV0 RNU6-1036P-201ENST00000383959 104 ntBASIC0.7□□□□□ -2.3
SYNGAP1Q96PV0 MIR1255B2-201ENST00000408618 67 ntBASIC0.7□□□□□ -2.3
SYNGAP1Q96PV0 SNORD57-201ENST00000448188 72 ntBASIC0.7□□□□□ -2.3
SYNGAP1Q96PV0 SNORD2-201ENST00000459163 69 ntBASIC0.7□□□□□ -2.3
SYNGAP1Q96PV0 RNU6-698P-201ENST00000363523 107 ntBASIC0.69□□□□□ -2.3
SYNGAP1Q96PV0 RNU6-34P-201ENST00000364874 107 ntBASIC0.69□□□□□ -2.3
SYNGAP1Q96PV0 SNORA75.1-201ENST00000391130 148 ntBASIC0.69□□□□□ -2.3
SYNGAP1Q96PV0 RNU6-518P-201ENST00000516056 96 ntBASIC0.69□□□□□ -2.3
SYNGAP1Q96PV0 RNU7-174P-201ENST00000516248 59 ntBASIC0.69□□□□□ -2.3
SYNGAP1Q96PV0 AC090617.8-201ENST00000623339 167 ntBASIC0.69□□□□□ -2.3
SYNGAP1Q96PV0 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.69□□□□□ -2.3
SYNGAP1Q96PV0 RNA5SP499-201ENST00000363982 119 ntBASIC0.68□□□□□ -2.3
SYNGAP1Q96PV0 SNX3P1X-201ENST00000414887 175 ntBASIC0.68□□□□□ -2.3
SYNGAP1Q96PV0 AC104692.1-201ENST00000472406 90 ntBASIC0.68□□□□□ -2.3
SYNGAP1Q96PV0 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
SYNGAP1Q96PV0 RNU6-1079P-201ENST00000362861 110 ntBASIC0.66□□□□□ -2.3
SYNGAP1Q96PV0 Y_RNA.246-201ENST00000364495 108 ntBASIC0.66□□□□□ -2.3
SYNGAP1Q96PV0 IGLVI-20-201ENST00000519296 130 ntBASIC0.66□□□□□ -2.3
SYNGAP1Q96PV0 SNORD44.1-201ENST00000363202 61 ntBASIC0.65□□□□□ -2.3
SYNGAP1Q96PV0 RNU6-175P-201ENST00000516896 107 ntBASIC0.65□□□□□ -2.3
SYNGAP1Q96PV0 MIR548AD-201ENST00000584780 82 ntBASIC0.65□□□□□ -2.3
SYNGAP1Q96PV0 MIR103A1-201ENST00000362165 78 ntBASIC0.64□□□□□ -2.31
SYNGAP1Q96PV0 AL021921.1-201ENST00000442774 93 ntBASIC0.64□□□□□ -2.31
SYNGAP1Q96PV0 SNORA68.3-201ENST00000515906 83 ntBASIC0.64□□□□□ -2.31
SYNGAP1Q96PV0 RNU6-848P-201ENST00000515948 107 ntBASIC0.64□□□□□ -2.31
SYNGAP1Q96PV0 RNU6-617P-201ENST00000516147 107 ntBASIC0.64□□□□□ -2.31
SYNGAP1Q96PV0 RNU6-473P-201ENST00000516164 107 ntBASIC0.64□□□□□ -2.31
SYNGAP1Q96PV0 RNU6-1049P-201ENST00000516414 107 ntBASIC0.64□□□□□ -2.31
SYNGAP1Q96PV0 SCARNA11.2-201ENST00000517183 154 ntBASIC0.64□□□□□ -2.31
SYNGAP1Q96PV0 U4.4-201ENST00000620626 117 ntBASIC0.64□□□□□ -2.31
SYNGAP1Q96PV0 RNU6-669P-201ENST00000365575 107 ntBASIC0.64□□□□□ -2.31
SYNGAP1Q96PV0 MIR92A1-201ENST00000385233 78 ntBASIC0.64□□□□□ -2.31
SYNGAP1Q96PV0 MIR3925-201ENST00000584674 77 ntBASIC0.64□□□□□ -2.31
SYNGAP1Q96PV0 MIR6773-201ENST00000612812 74 ntBASIC0.64□□□□□ -2.31
SYNGAP1Q96PV0 RN7SL660P-201ENST00000614852 299 ntBASIC0.64□□□□□ -2.31
SYNGAP1Q96PV0 Y_RNA.185-201ENST00000363894 100 ntBASIC0.63□□□□□ -2.31
SYNGAP1Q96PV0 Y_RNA.325-201ENST00000365171 122 ntBASIC0.63□□□□□ -2.31
SYNGAP1Q96PV0 RNU6-863P-201ENST00000515989 104 ntBASIC0.63□□□□□ -2.31
SYNGAP1Q96PV0 AP000676.1-201ENST00000533307 52 ntBASIC0.63□□□□□ -2.31
SYNGAP1Q96PV0 SNORD60.1-201ENST00000362451 73 ntBASIC0.62□□□□□ -2.31
SYNGAP1Q96PV0 SNORA49-201ENST00000386157 136 ntBASIC0.61□□□□□ -2.31
SYNGAP1Q96PV0 RNU6-1246P-201ENST00000391064 107 ntBASIC0.61□□□□□ -2.31
SYNGAP1Q96PV0 Y_RNA.610-201ENST00000410681 103 ntBASIC0.61□□□□□ -2.31
SYNGAP1Q96PV0 RNU6-782P-201ENST00000516852 104 ntBASIC0.61□□□□□ -2.31
SYNGAP1Q96PV0 SNORD115-25-201ENST00000362619 82 ntBASIC0.6□□□□□ -2.31
SYNGAP1Q96PV0 MIR519A2-201ENST00000384990 87 ntBASIC0.6□□□□□ -2.31
SYNGAP1Q96PV0 MIR527-201ENST00000385244 85 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 320.9 ms