Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 RNU6-624P-201ENST00000363411 107 ntBASIC-4.01□□□□□ -3.05
CFAP54Q96N23 SCARNA23-201ENST00000516060 130 ntBASIC-4.01□□□□□ -3.05
CFAP54Q96N23 RNU6-508P-201ENST00000363231 103 ntBASIC-4.01□□□□□ -3.05
CFAP54Q96N23 snoU2_19.4-201ENST00000364329 80 ntBASIC-4.01□□□□□ -3.05
CFAP54Q96N23 Y_RNA.309-201ENST00000365046 111 ntBASIC-4.01□□□□□ -3.05
CFAP54Q96N23 RNU6-276P-201ENST00000516114 96 ntBASIC-4.01□□□□□ -3.05
CFAP54Q96N23 MTCO2P19-201ENST00000427513 598 ntBASIC-4.02□□□□□ -3.05
CFAP54Q96N23 MIR548AI-201ENST00000579940 88 ntBASIC-4.02□□□□□ -3.05
CFAP54Q96N23 RNU6-1255P-201ENST00000363434 112 ntBASIC-4.03□□□□□ -3.05
CFAP54Q96N23 RNU6-381P-201ENST00000391259 108 ntBASIC-4.03□□□□□ -3.06
CFAP54Q96N23 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-4.03□□□□□ -3.06
CFAP54Q96N23 MIR3913-1-201ENST00000577744 102 ntBASIC-4.03□□□□□ -3.06
CFAP54Q96N23 AP000240.1-201ENST00000609910 452 ntBASIC-4.03□□□□□ -3.06
CFAP54Q96N23 AC006927.3-201ENST00000638789 384 ntBASIC-4.04□□□□□ -3.06
CFAP54Q96N23 SNORD45A-201ENST00000384512 84 ntBASIC-4.04□□□□□ -3.06
CFAP54Q96N23 MIR4801-201ENST00000582704 82 ntBASIC-4.04□□□□□ -3.06
CFAP54Q96N23 RNU6-211P-201ENST00000384047 107 ntBASIC-4.05□□□□□ -3.06
CFAP54Q96N23 Y_RNA.563-201ENST00000384707 108 ntBASIC-4.05□□□□□ -3.06
CFAP54Q96N23 RNU6-413P-201ENST00000384115 107 ntBASIC-4.06□□□□□ -3.06
CFAP54Q96N23 RNU6-402P-201ENST00000410678 103 ntBASIC-4.06□□□□□ -3.06
CFAP54Q96N23 MIR3149-201ENST00000584629 83 ntBASIC-4.06□□□□□ -3.06
CFAP54Q96N23 AL121895.2-201ENST00000619558 447 ntBASIC-4.06□□□□□ -3.06
CFAP54Q96N23 AC139792.2-201ENST00000624218 587 ntBASIC-4.06□□□□□ -3.06
CFAP54Q96N23 SNORD116-12-201ENST00000384468 92 ntBASIC-4.06□□□□□ -3.06
CFAP54Q96N23 MIR519C-201ENST00000385053 87 ntBASIC-4.07□□□□□ -3.06
CFAP54Q96N23 RNU6-373P-201ENST00000411247 98 ntBASIC-4.07□□□□□ -3.06
CFAP54Q96N23 RNU6-557P-201ENST00000516842 110 ntBASIC-4.07□□□□□ -3.06
CFAP54Q96N23 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-4.07□□□□□ -3.06
CFAP54Q96N23 MIR3662-201ENST00000637030 95 ntBASIC-4.07□□□□□ -3.06
CFAP54Q96N23 RNU6-578P-201ENST00000390980 103 ntBASIC-4.07□□□□□ -3.06
CFAP54Q96N23 SNORD2.1-201ENST00000458762 69 ntBASIC-4.08□□□□□ -3.06
CFAP54Q96N23 MIR6128-201ENST00000615528 109 ntBASIC-4.08□□□□□ -3.06
CFAP54Q96N23 RNU6-261P-201ENST00000459506 102 ntBASIC-4.08□□□□□ -3.06
CFAP54Q96N23 MIR376A1-201ENST00000616574 68 ntBASIC-4.09□□□□□ -3.06
CFAP54Q96N23 RNU6-937P-201ENST00000384325 106 ntBASIC-4.1□□□□□ -3.07
CFAP54Q96N23 U8.20-201ENST00000459445 131 ntBASIC-4.1□□□□□ -3.07
CFAP54Q96N23 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-4.1□□□□□ -3.07
CFAP54Q96N23 RNU6-593P-201ENST00000364716 112 ntBASIC-4.1□□□□□ -3.07
CFAP54Q96N23 RNU6-89P-201ENST00000606519 100 ntBASIC-4.1□□□□□ -3.07
CFAP54Q96N23 DLEU2_1.2-201ENST00000614667 120 ntBASIC-4.1□□□□□ -3.07
CFAP54Q96N23 RNU6-307P-201ENST00000516743 106 ntBASIC-4.1□□□□□ -3.07
CFAP54Q96N23 RNU6-256P-201ENST00000516747 97 ntBASIC-4.1□□□□□ -3.07
CFAP54Q96N23 RNU6-1158P-201ENST00000391167 107 ntBASIC-4.11□□□□□ -3.07
CFAP54Q96N23 AC074348.1-201ENST00000426503 132 ntBASIC-4.11□□□□□ -3.07
CFAP54Q96N23 Y_RNA.96-201ENST00000363092 109 ntBASIC-4.11□□□□□ -3.07
CFAP54Q96N23 RNU6-940P-201ENST00000363433 104 ntBASIC-4.11□□□□□ -3.07
CFAP54Q96N23 Y_RNA.544-201ENST00000384650 113 ntBASIC-4.11□□□□□ -3.07
CFAP54Q96N23 Y_RNA.445-201ENST00000384168 102 ntBASIC-4.12□□□□□ -3.07
CFAP54Q96N23 SNORA75.5-201ENST00000391291 81 ntBASIC-4.12□□□□□ -3.07
CFAP54Q96N23 Y_RNA.594-201ENST00000410373 140 ntBASIC-4.12□□□□□ -3.07
CFAP54Q96N23 MIR1297-201ENST00000637311 77 ntBASIC-4.12□□□□□ -3.07
CFAP54Q96N23 SNORA63.4-201ENST00000362763 126 ntBASIC-4.12□□□□□ -3.07
CFAP54Q96N23 RNU6-883P-201ENST00000384597 107 ntBASIC-4.12□□□□□ -3.07
CFAP54Q96N23 DLEU2_2.2-201ENST00000615474 90 ntBASIC-4.12□□□□□ -3.07
CFAP54Q96N23 RNY4P19-201ENST00000362530 96 ntBASIC-4.13□□□□□ -3.07
CFAP54Q96N23 RNU6-686P-201ENST00000364839 107 ntBASIC-4.13□□□□□ -3.07
CFAP54Q96N23 Y_RNA.682-201ENST00000516457 100 ntBASIC-4.13□□□□□ -3.07
CFAP54Q96N23 Y_RNA.686-201ENST00000516548 134 ntBASIC-4.13□□□□□ -3.07
CFAP54Q96N23 AP001318.4-201ENST00000616637 121 ntBASIC-4.13□□□□□ -3.07
CFAP54Q96N23 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-4.13□□□□□ -3.07
CFAP54Q96N23 RNY3P2-201ENST00000362918 102 ntBASIC-4.13□□□□□ -3.07
CFAP54Q96N23 Y_RNA.532-201ENST00000384590 113 ntBASIC-4.13□□□□□ -3.07
CFAP54Q96N23 SNORD42A-201ENST00000459584 64 ntBASIC-4.13□□□□□ -3.07
CFAP54Q96N23 RNU5E-3P-201ENST00000515913 68 ntBASIC-4.13□□□□□ -3.07
CFAP54Q96N23 MIRLET7A1-201ENST00000362295 80 ntBASIC-4.14□□□□□ -3.07
CFAP54Q96N23 RNU6-768P-201ENST00000384683 107 ntBASIC-4.14□□□□□ -3.07
CFAP54Q96N23 RNU6-639P-201ENST00000384074 107 ntBASIC-4.15□□□□□ -3.07
CFAP54Q96N23 RNU6-1024P-201ENST00000384199 107 ntBASIC-4.15□□□□□ -3.07
CFAP54Q96N23 Y_RNA.29-201ENST00000362570 113 ntBASIC-4.15□□□□□ -3.07
CFAP54Q96N23 Y_RNA.414-201ENST00000384011 101 ntBASIC-4.15□□□□□ -3.07
CFAP54Q96N23 RNU6-876P-201ENST00000391295 104 ntBASIC-4.15□□□□□ -3.07
CFAP54Q96N23 Y_RNA.615-201ENST00000410769 117 ntBASIC-4.15□□□□□ -3.07
CFAP54Q96N23 RNU6-130P-201ENST00000411112 103 ntBASIC-4.15□□□□□ -3.07
CFAP54Q96N23 AL603755.1-201ENST00000619504 163 ntBASIC-4.15□□□□□ -3.07
CFAP54Q96N23 Y_RNA.345-201ENST00000365384 92 ntBASIC-4.16□□□□□ -3.08
CFAP54Q96N23 MIR548P-201ENST00000408336 84 ntBASIC-4.16□□□□□ -3.08
CFAP54Q96N23 AC130289.1-201ENST00000577321 73 ntBASIC-4.16□□□□□ -3.08
CFAP54Q96N23 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-4.17□□□□□ -3.08
CFAP54Q96N23 SNORD116.1-201ENST00000365628 92 ntBASIC-4.17□□□□□ -3.08
CFAP54Q96N23 SCARNA15.1-201ENST00000516384 125 ntBASIC-4.17□□□□□ -3.08
CFAP54Q96N23 RNU6-1325P-201ENST00000364905 105 ntBASIC-4.18□□□□□ -3.08
CFAP54Q96N23 RNU6-931P-201ENST00000363850 107 ntBASIC-4.18□□□□□ -3.08
CFAP54Q96N23 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-4.18□□□□□ -3.08
CFAP54Q96N23 Y_RNA.314-201ENST00000365114 102 ntBASIC-4.19□□□□□ -3.08
CFAP54Q96N23 MIR514A2-201ENST00000385131 88 ntBASIC-4.19□□□□□ -3.08
CFAP54Q96N23 MIR514A3-201ENST00000385132 88 ntBASIC-4.19□□□□□ -3.08
CFAP54Q96N23 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-4.19□□□□□ -3.08
CFAP54Q96N23 Y_RNA.41-201ENST00000362646 102 ntBASIC-4.19□□□□□ -3.08
CFAP54Q96N23 SNORA25.5-201ENST00000363782 126 ntBASIC-4.19□□□□□ -3.08
CFAP54Q96N23 RNU6-806P-201ENST00000365147 105 ntBASIC-4.2□□□□□ -3.08
CFAP54Q96N23 MIR154-201ENST00000385243 84 ntBASIC-4.2□□□□□ -3.08
CFAP54Q96N23 SNORA40.3-201ENST00000390964 122 ntBASIC-4.2□□□□□ -3.08
CFAP54Q96N23 MIR5009-201ENST00000578736 100 ntBASIC-4.2□□□□□ -3.08
CFAP54Q96N23 Y_RNA.530-201ENST00000384587 101 ntBASIC-4.2□□□□□ -3.08
CFAP54Q96N23 SNORD115-46-201ENST00000390982 71 ntBASIC-4.2□□□□□ -3.08
CFAP54Q96N23 RNU6-264P-201ENST00000517134 104 ntBASIC-4.2□□□□□ -3.08
CFAP54Q96N23 MIR1263-201ENST00000408324 86 ntBASIC-4.21□□□□□ -3.08
CFAP54Q96N23 MIR548F5-201ENST00000408421 86 ntBASIC-4.21□□□□□ -3.08
CFAP54Q96N23 RNU6-770P-201ENST00000363929 105 ntBASIC-4.21□□□□□ -3.08
CFAP54Q96N23 RNU6-1008P-201ENST00000384160 104 ntBASIC-4.21□□□□□ -3.08
Retrieved 100 of 98,524 protein–RNA pairs in 190.9 ms