Protein–RNA interactions for Protein: P03956

MMP1, Interstitial collagenase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1P03956 MIR3179-3-201ENST00000579566 84 ntBASIC-0.65□□□□□ -2.51
MMP1P03956 MIR4464-201ENST00000580818 92 ntBASIC-0.65□□□□□ -2.51
MMP1P03956 MIR3179-4-201ENST00000617599 84 ntBASIC-0.65□□□□□ -2.51
MMP1P03956 RNU6-640P-201ENST00000363693 105 ntBASIC-0.66□□□□□ -2.52
MMP1P03956 RNU6-215P-201ENST00000365169 102 ntBASIC-0.66□□□□□ -2.52
MMP1P03956 MIR488-201ENST00000365739 83 ntBASIC-0.66□□□□□ -2.52
MMP1P03956 SNORD77.2-201ENST00000391045 68 ntBASIC-0.66□□□□□ -2.52
MMP1P03956 RNU6-624P-201ENST00000363411 107 ntBASIC-0.67□□□□□ -2.52
MMP1P03956 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.67□□□□□ -2.52
MMP1P03956 SNORD20-201ENST00000384550 80 ntBASIC-0.67□□□□□ -2.52
MMP1P03956 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.67□□□□□ -2.52
MMP1P03956 RNU6-752P-201ENST00000516376 102 ntBASIC-0.67□□□□□ -2.52
MMP1P03956 RNU6-406P-201ENST00000516470 107 ntBASIC-0.67□□□□□ -2.52
MMP1P03956 RNU6-267P-201ENST00000516714 103 ntBASIC-0.67□□□□□ -2.52
MMP1P03956 AL353803.5-201ENST00000599815 141 ntBASIC-0.67□□□□□ -2.52
MMP1P03956 SNORD74.6-201ENST00000364796 70 ntBASIC-0.68□□□□□ -2.52
MMP1P03956 RNU6-147P-201ENST00000383983 107 ntBASIC-0.68□□□□□ -2.52
MMP1P03956 MIR521-2-201ENST00000384818 87 ntBASIC-0.68□□□□□ -2.52
MMP1P03956 MIR1255B2-201ENST00000408618 67 ntBASIC-0.68□□□□□ -2.52
MMP1P03956 RNU6-402P-201ENST00000410678 103 ntBASIC-0.68□□□□□ -2.52
MMP1P03956 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.68□□□□□ -2.52
MMP1P03956 CYP3A54P-201ENST00000566950 75 ntBASIC-0.68□□□□□ -2.52
MMP1P03956 MIR6739-201ENST00000622461 75 ntBASIC-0.68□□□□□ -2.52
MMP1P03956 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.69□□□□□ -2.52
MMP1P03956 MT-TQ-201ENST00000387372 72 ntBASIC-0.69□□□□□ -2.52
MMP1P03956 AC093729.1-201ENST00000513074 128 ntBASIC-0.69□□□□□ -2.52
MMP1P03956 RNU6-881P-201ENST00000516813 102 ntBASIC-0.69□□□□□ -2.52
MMP1P03956 AC140658.3-201ENST00000567603 271 ntBASIC-0.69□□□□□ -2.52
MMP1P03956 SNORA62.4-201ENST00000365504 151 ntBASIC-0.7□□□□□ -2.52
MMP1P03956 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.7□□□□□ -2.52
MMP1P03956 SNORD116-22-201ENST00000384430 92 ntBASIC-0.7□□□□□ -2.52
MMP1P03956 RNA5SP266-201ENST00000410273 108 ntBASIC-0.7□□□□□ -2.52
MMP1P03956 AL035461.1-201ENST00000421490 332 ntBASIC-0.7□□□□□ -2.52
MMP1P03956 AP000533.3-201ENST00000447704 118 ntBASIC-0.7□□□□□ -2.52
MMP1P03956 AC022137.1-201ENST00000483735 151 ntBASIC-0.7□□□□□ -2.52
MMP1P03956 RNU6-789P-201ENST00000517105 102 ntBASIC-0.7□□□□□ -2.52
MMP1P03956 SNORD115-37-201ENST00000363768 82 ntBASIC-0.71□□□□□ -2.52
MMP1P03956 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.71□□□□□ -2.52
MMP1P03956 RNU6-32P-201ENST00000383948 107 ntBASIC-0.71□□□□□ -2.52
MMP1P03956 RNU6-13P-201ENST00000384248 107 ntBASIC-0.71□□□□□ -2.52
MMP1P03956 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.71□□□□□ -2.52
MMP1P03956 RNU6-1081P-201ENST00000384537 107 ntBASIC-0.71□□□□□ -2.52
MMP1P03956 RNU6-12P-201ENST00000384604 107 ntBASIC-0.71□□□□□ -2.52
MMP1P03956 RNU6-41P-201ENST00000384741 107 ntBASIC-0.71□□□□□ -2.52
MMP1P03956 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.71□□□□□ -2.52
MMP1P03956 RNU6-919P-201ENST00000516731 104 ntBASIC-0.71□□□□□ -2.52
MMP1P03956 MIR3681-201ENST00000580089 72 ntBASIC-0.71□□□□□ -2.52
MMP1P03956 MIR6888-201ENST00000621977 67 ntBASIC-0.71□□□□□ -2.52
MMP1P03956 RNU6-681P-201ENST00000364012 104 ntBASIC-0.72□□□□□ -2.52
MMP1P03956 RNY1P7-201ENST00000384743 110 ntBASIC-0.72□□□□□ -2.52
MMP1P03956 MIR124-2-201ENST00000385081 109 ntBASIC-0.72□□□□□ -2.52
MMP1P03956 MIR517B-201ENST00000385102 67 ntBASIC-0.72□□□□□ -2.52
MMP1P03956 RNU4-63P-201ENST00000411313 118 ntBASIC-0.72□□□□□ -2.52
MMP1P03956 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.72□□□□□ -2.52
MMP1P03956 RNA5SP470-201ENST00000516463 106 ntBASIC-0.72□□□□□ -2.52
MMP1P03956 AL445584.3-201ENST00000617173 78 ntBASIC-0.72□□□□□ -2.52
MMP1P03956 MIR548BB-201ENST00000626714 66 ntBASIC-0.72□□□□□ -2.52
MMP1P03956 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.73□□□□□ -2.53
MMP1P03956 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.73□□□□□ -2.53
MMP1P03956 RNU4-61P-201ENST00000411243 107 ntBASIC-0.74□□□□□ -2.53
MMP1P03956 RNU6-675P-201ENST00000384236 104 ntBASIC-0.75□□□□□ -2.53
MMP1P03956 SNORD18.2-201ENST00000459604 70 ntBASIC-0.75□□□□□ -2.53
MMP1P03956 RNU6-656P-201ENST00000516785 107 ntBASIC-0.75□□□□□ -2.53
MMP1P03956 RNU6-557P-201ENST00000516842 110 ntBASIC-0.75□□□□□ -2.53
MMP1P03956 RNU6-330P-201ENST00000363015 107 ntBASIC-0.76□□□□□ -2.53
MMP1P03956 RNU6-478P-201ENST00000363904 110 ntBASIC-0.76□□□□□ -2.53
MMP1P03956 RNU6-44P-201ENST00000384045 107 ntBASIC-0.76□□□□□ -2.53
MMP1P03956 MIR519A2-201ENST00000384990 87 ntBASIC-0.76□□□□□ -2.53
MMP1P03956 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.77□□□□□ -2.53
MMP1P03956 RNU7-154P-201ENST00000516194 62 ntBASIC-0.77□□□□□ -2.53
MMP1P03956 RNU6-844P-201ENST00000517175 102 ntBASIC-0.77□□□□□ -2.53
MMP1P03956 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.77□□□□□ -2.53
MMP1P03956 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.78□□□□□ -2.53
MMP1P03956 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.78□□□□□ -2.53
MMP1P03956 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.79□□□□□ -2.54
MMP1P03956 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.79□□□□□ -2.54
MMP1P03956 AC074348.1-201ENST00000426503 132 ntBASIC-0.79□□□□□ -2.54
MMP1P03956 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.79□□□□□ -2.54
MMP1P03956 RNU6-518P-201ENST00000516056 96 ntBASIC-0.79□□□□□ -2.54
MMP1P03956 RNU6-303P-201ENST00000517091 106 ntBASIC-0.79□□□□□ -2.54
MMP1P03956 RNU6-686P-201ENST00000364839 107 ntBASIC-0.8□□□□□ -2.54
MMP1P03956 Y_RNA.291-201ENST00000364886 113 ntBASIC-0.8□□□□□ -2.54
MMP1P03956 RNU6-431P-201ENST00000383874 107 ntBASIC-0.8□□□□□ -2.54
MMP1P03956 MIR548AG1-201ENST00000579932 66 ntBASIC-0.8□□□□□ -2.54
MMP1P03956 U2.7-201ENST00000619197 100 ntBASIC-0.8□□□□□ -2.54
MMP1P03956 AC006160.2-201ENST00000637708 154 ntBASIC-0.8□□□□□ -2.54
MMP1P03956 Y_RNA.17-201ENST00000362433 111 ntBASIC-0.81□□□□□ -2.54
MMP1P03956 SNORD114-25-201ENST00000363742 72 ntBASIC-0.81□□□□□ -2.54
MMP1P03956 SNORD114-17-201ENST00000364699 75 ntBASIC-0.81□□□□□ -2.54
MMP1P03956 RNU6-49P-201ENST00000384256 107 ntBASIC-0.81□□□□□ -2.54
MMP1P03956 MIR147A-201ENST00000385079 72 ntBASIC-0.81□□□□□ -2.54
MMP1P03956 Y_RNA.593-201ENST00000410292 98 ntBASIC-0.81□□□□□ -2.54
MMP1P03956 RNU6-168P-201ENST00000516189 101 ntBASIC-0.81□□□□□ -2.54
MMP1P03956 U2.22-201ENST00000636441 106 ntBASIC-0.81□□□□□ -2.54
MMP1P03956 RNU6-645P-201ENST00000364649 106 ntBASIC-0.82□□□□□ -2.54
MMP1P03956 RNU6-129P-201ENST00000391022 107 ntBASIC-0.82□□□□□ -2.54
MMP1P03956 RNA5SP89-201ENST00000410300 108 ntBASIC-0.82□□□□□ -2.54
MMP1P03956 AL021921.1-201ENST00000442774 93 ntBASIC-0.82□□□□□ -2.54
MMP1P03956 RNY1P9-201ENST00000532431 109 ntBASIC-0.82□□□□□ -2.54
MMP1P03956 MIR3675-201ENST00000583661 73 ntBASIC-0.82□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 171 ms