Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 MIR548C-201ENST00000384815 97 ntBASIC-3.06□□□□□ -2.9
SRP9P49458 RNU6-239P-201ENST00000390990 99 ntBASIC-3.06□□□□□ -2.9
SRP9P49458 RNU6-1262P-201ENST00000516217 96 ntBASIC-3.06□□□□□ -2.9
SRP9P49458 DNAJC19P2-201ENST00000593340 302 ntBASIC-3.06□□□□□ -2.9
SRP9P49458 RNY3P2-201ENST00000362918 102 ntBASIC-3.07□□□□□ -2.9
SRP9P49458 RNU6-915P-201ENST00000364943 103 ntBASIC-3.07□□□□□ -2.9
SRP9P49458 Y_RNA.483-201ENST00000384380 101 ntBASIC-3.07□□□□□ -2.9
SRP9P49458 Y_RNA.529-201ENST00000384586 119 ntBASIC-3.07□□□□□ -2.9
SRP9P49458 RNU6-713P-201ENST00000384761 107 ntBASIC-3.07□□□□□ -2.9
SRP9P49458 RNU6-988P-201ENST00000519081 107 ntBASIC-3.07□□□□□ -2.9
SRP9P49458 RNU6-1318P-201ENST00000365389 103 ntBASIC-3.08□□□□□ -2.9
SRP9P49458 Y_RNA.512-201ENST00000384518 102 ntBASIC-3.08□□□□□ -2.9
SRP9P49458 RNU6-918P-201ENST00000391219 106 ntBASIC-3.08□□□□□ -2.9
SRP9P49458 RNU6-781P-201ENST00000516377 101 ntBASIC-3.08□□□□□ -2.9
SRP9P49458 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-3.08□□□□□ -2.9
SRP9P49458 Y_RNA.158-201ENST00000363651 101 ntBASIC-3.09□□□□□ -2.9
SRP9P49458 RNU6-1152P-201ENST00000384576 107 ntBASIC-3.09□□□□□ -2.9
SRP9P49458 Y_RNA.563-201ENST00000384707 108 ntBASIC-3.09□□□□□ -2.9
SRP9P49458 RNU6-460P-201ENST00000391158 108 ntBASIC-3.09□□□□□ -2.9
SRP9P49458 RNU6-752P-201ENST00000516376 102 ntBASIC-3.09□□□□□ -2.9
SRP9P49458 Y_RNA.95-201ENST00000363079 95 ntBASIC-3.1□□□□□ -2.91
SRP9P49458 SNORD45B-201ENST00000364617 72 ntBASIC-3.1□□□□□ -2.91
SRP9P49458 SNORD42.2-201ENST00000365570 69 ntBASIC-3.1□□□□□ -2.91
SRP9P49458 RNU6-1113P-201ENST00000384348 107 ntBASIC-3.1□□□□□ -2.91
SRP9P49458 RNU6-118P-201ENST00000516552 102 ntBASIC-3.1□□□□□ -2.91
SRP9P49458 RNU6-1153P-201ENST00000516760 105 ntBASIC-3.1□□□□□ -2.91
SRP9P49458 RNU6-623P-201ENST00000363143 105 ntBASIC-3.11□□□□□ -2.91
SRP9P49458 Y_RNA.356-201ENST00000365475 113 ntBASIC-3.11□□□□□ -2.91
SRP9P49458 RNU6-258P-201ENST00000390884 101 ntBASIC-3.11□□□□□ -2.91
SRP9P49458 Y_RNA.606-201ENST00000410579 103 ntBASIC-3.11□□□□□ -2.91
SRP9P49458 RNU7-121P-201ENST00000516604 62 ntBASIC-3.11□□□□□ -2.91
SRP9P49458 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-3.11□□□□□ -2.91
SRP9P49458 RNU4-88P-201ENST00000411220 86 ntBASIC-3.13□□□□□ -2.91
SRP9P49458 SNORD54-201ENST00000459159 67 ntBASIC-3.13□□□□□ -2.91
SRP9P49458 Y_RNA.309-201ENST00000365046 111 ntBASIC-3.14□□□□□ -2.91
SRP9P49458 Y_RNA.449-201ENST00000384187 102 ntBASIC-3.14□□□□□ -2.91
SRP9P49458 MIR548A3-201ENST00000385297 97 ntBASIC-3.14□□□□□ -2.91
SRP9P49458 MTND2P23-201ENST00000422990 651 ntBASIC-3.14□□□□□ -2.91
SRP9P49458 RNU6-1219P-201ENST00000516143 112 ntBASIC-3.14□□□□□ -2.91
SRP9P49458 MIR4680-201ENST00000580906 66 ntBASIC-3.14□□□□□ -2.91
SRP9P49458 Y_RNA.109-201ENST00000363215 102 ntBASIC-3.15□□□□□ -2.91
SRP9P49458 RNU6-861P-201ENST00000516745 106 ntBASIC-3.15□□□□□ -2.91
SRP9P49458 MIR4796-201ENST00000580742 81 ntBASIC-3.15□□□□□ -2.91
SRP9P49458 RNU6-1034P-201ENST00000365335 101 ntBASIC-3.16□□□□□ -2.92
SRP9P49458 Y_RNA.435-201ENST00000384095 112 ntBASIC-3.16□□□□□ -2.92
SRP9P49458 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-3.16□□□□□ -2.92
SRP9P49458 U6.104-201ENST00000637979 90 ntBASIC-3.16□□□□□ -2.92
SRP9P49458 RNU6-598P-201ENST00000364017 105 ntBASIC-3.17□□□□□ -2.92
SRP9P49458 RNY4P7-201ENST00000364600 96 ntBASIC-3.17□□□□□ -2.92
SRP9P49458 RNU7-197P-201ENST00000458836 62 ntBASIC-3.17□□□□□ -2.92
SRP9P49458 Y_RNA.74-201ENST00000362911 99 ntBASIC-3.18□□□□□ -2.92
SRP9P49458 RNU6-194P-201ENST00000363862 105 ntBASIC-3.18□□□□□ -2.92
SRP9P49458 RNU4-11P-201ENST00000365287 132 ntBASIC-3.18□□□□□ -2.92
SRP9P49458 RNU6-474P-201ENST00000384243 107 ntBASIC-3.18□□□□□ -2.92
SRP9P49458 AL450471.1-201ENST00000447509 127 ntBASIC-3.18□□□□□ -2.92
SRP9P49458 MIR429-201ENST00000362106 83 ntBASIC-3.19□□□□□ -2.92
SRP9P49458 Y_RNA.211-201ENST00000364164 101 ntBASIC-3.19□□□□□ -2.92
SRP9P49458 AC025166.1-201ENST00000612411 163 ntBASIC-3.19□□□□□ -2.92
SRP9P49458 RNU6-645P-201ENST00000364649 106 ntBASIC-3.2□□□□□ -2.92
SRP9P49458 Y_RNA.282-201ENST00000364793 102 ntBASIC-3.2□□□□□ -2.92
SRP9P49458 Y_RNA.403-201ENST00000383977 101 ntBASIC-3.2□□□□□ -2.92
SRP9P49458 Y_RNA.419-201ENST00000384041 102 ntBASIC-3.2□□□□□ -2.92
SRP9P49458 RNU6-1111P-201ENST00000391118 107 ntBASIC-3.2□□□□□ -2.92
SRP9P49458 AL035461.1-201ENST00000421490 332 ntBASIC-3.2□□□□□ -2.92
SRP9P49458 MIR4777-201ENST00000583710 86 ntBASIC-3.2□□□□□ -2.92
SRP9P49458 Y_RNA.781-201ENST00000620301 103 ntBASIC-3.2□□□□□ -2.92
SRP9P49458 Y_RNA.10-201ENST00000362371 110 ntBASIC-3.21□□□□□ -2.92
SRP9P49458 Y_RNA.29-201ENST00000362570 113 ntBASIC-3.21□□□□□ -2.92
SRP9P49458 RNU6-340P-201ENST00000364005 107 ntBASIC-3.21□□□□□ -2.92
SRP9P49458 Y_RNA.591-201ENST00000410228 104 ntBASIC-3.21□□□□□ -2.92
SRP9P49458 AL158147.1-201ENST00000443970 75 ntBASIC-3.21□□□□□ -2.92
SRP9P49458 RNU6-1137P-201ENST00000517073 99 ntBASIC-3.21□□□□□ -2.92
SRP9P49458 MIR4795-201ENST00000584182 89 ntBASIC-3.21□□□□□ -2.92
SRP9P49458 U2.18-201ENST00000622185 84 ntBASIC-3.21□□□□□ -2.92
SRP9P49458 AL035470.1-201ENST00000622571 220 ntBASIC-3.21□□□□□ -2.92
SRP9P49458 Y_RNA.325-201ENST00000365171 122 ntBASIC-3.22□□□□□ -2.92
SRP9P49458 AC026407.1-201ENST00000518369 204 ntBASIC-3.22□□□□□ -2.92
SRP9P49458 MIR8062-201ENST00000621515 85 ntBASIC-3.22□□□□□ -2.92
SRP9P49458 RNA5SP405-201ENST00000363059 114 ntBASIC-3.23□□□□□ -2.93
SRP9P49458 RNU6-795P-201ENST00000516323 103 ntBASIC-3.23□□□□□ -2.93
SRP9P49458 MIR3144-201ENST00000579460 79 ntBASIC-3.23□□□□□ -2.93
SRP9P49458 MIR3170-201ENST00000582699 77 ntBASIC-3.23□□□□□ -2.93
SRP9P49458 RNU6-639P-201ENST00000384074 107 ntBASIC-3.24□□□□□ -2.93
SRP9P49458 RNU6-1267P-201ENST00000410747 107 ntBASIC-3.24□□□□□ -2.93
SRP9P49458 RNU7-174P-201ENST00000516248 59 ntBASIC-3.24□□□□□ -2.93
SRP9P49458 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-3.24□□□□□ -2.93
SRP9P49458 RNU6-681P-201ENST00000364012 104 ntBASIC-3.25□□□□□ -2.93
SRP9P49458 RNU6-1020P-201ENST00000363684 107 ntBASIC-3.28□□□□□ -2.93
SRP9P49458 RNU6-875P-201ENST00000516488 106 ntBASIC-3.28□□□□□ -2.93
SRP9P49458 RNU6-1061P-201ENST00000516530 99 ntBASIC-3.28□□□□□ -2.93
SRP9P49458 AC022559.1-201ENST00000520905 205 ntBASIC-3.28□□□□□ -2.93
SRP9P49458 VTRNA2-1-201ENST00000602301 127 ntBASIC-3.28□□□□□ -2.93
SRP9P49458 AC012531.4-201ENST00000616509 177 ntBASIC-3.28□□□□□ -2.93
SRP9P49458 RNU6-247P-201ENST00000362636 107 ntBASIC-3.29□□□□□ -2.94
SRP9P49458 RNU6-682P-201ENST00000363843 106 ntBASIC-3.29□□□□□ -2.94
SRP9P49458 Y_RNA.233-201ENST00000364407 101 ntBASIC-3.29□□□□□ -2.94
SRP9P49458 SNORD58A-201ENST00000383875 65 ntBASIC-3.29□□□□□ -2.94
SRP9P49458 Y_RNA.564-201ENST00000384708 106 ntBASIC-3.29□□□□□ -2.94
SRP9P49458 RNU6-587P-201ENST00000391282 106 ntBASIC-3.29□□□□□ -2.94
SRP9P49458 RNU6-635P-201ENST00000516651 102 ntBASIC-3.29□□□□□ -2.94
Retrieved 100 of 98,524 protein–RNA pairs in 184.3 ms