Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 RNU6-62P-201ENST00000516526 102 ntBASIC-1.5□□□□□ -2.65
COL4A5P29400 RNU7-121P-201ENST00000516604 62 ntBASIC-1.5□□□□□ -2.65
COL4A5P29400 AC025521.1-201ENST00000621624 286 ntBASIC-1.5□□□□□ -2.65
COL4A5P29400 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.51□□□□□ -2.65
COL4A5P29400 RNU6-639P-201ENST00000384074 107 ntBASIC-1.51□□□□□ -2.65
COL4A5P29400 Y_RNA.435-201ENST00000384095 112 ntBASIC-1.51□□□□□ -2.65
COL4A5P29400 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.51□□□□□ -2.65
COL4A5P29400 MIR521-2-201ENST00000384818 87 ntBASIC-1.51□□□□□ -2.65
COL4A5P29400 MIR203A-201ENST00000384836 110 ntBASIC-1.51□□□□□ -2.65
COL4A5P29400 MIR577-201ENST00000385196 96 ntBASIC-1.51□□□□□ -2.65
COL4A5P29400 AL513043.2-201ENST00000573941 143 ntBASIC-1.51□□□□□ -2.65
COL4A5P29400 MIR23C-201ENST00000579846 100 ntBASIC-1.51□□□□□ -2.65
COL4A5P29400 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.51□□□□□ -2.65
COL4A5P29400 Y_RNA.460-201ENST00000384255 102 ntBASIC-1.51□□□□□ -2.65
COL4A5P29400 MTND2P23-201ENST00000422990 651 ntBASIC-1.51□□□□□ -2.65
COL4A5P29400 RNU7-85P-201ENST00000458851 63 ntBASIC-1.51□□□□□ -2.65
COL4A5P29400 MIR466-201ENST00000580653 84 ntBASIC-1.51□□□□□ -2.65
COL4A5P29400 MIR4439-201ENST00000583746 80 ntBASIC-1.51□□□□□ -2.65
COL4A5P29400 RNU6-132P-201ENST00000383863 107 ntBASIC-1.52□□□□□ -2.65
COL4A5P29400 RNU7-154P-201ENST00000516194 62 ntBASIC-1.52□□□□□ -2.65
COL4A5P29400 RNU4-71P-201ENST00000516258 113 ntBASIC-1.52□□□□□ -2.65
COL4A5P29400 Y_RNA.702-201ENST00000516843 96 ntBASIC-1.52□□□□□ -2.65
COL4A5P29400 MIR548W-201ENST00000581970 74 ntBASIC-1.52□□□□□ -2.65
COL4A5P29400 RNY4P9-201ENST00000363194 97 ntBASIC-1.53□□□□□ -2.65
COL4A5P29400 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.53□□□□□ -2.65
COL4A5P29400 MIR513C-201ENST00000401352 84 ntBASIC-1.53□□□□□ -2.65
COL4A5P29400 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.54□□□□□ -2.66
COL4A5P29400 SNORA33.1-201ENST00000364957 130 ntBASIC-1.54□□□□□ -2.66
COL4A5P29400 RNU6-258P-201ENST00000390884 101 ntBASIC-1.54□□□□□ -2.66
COL4A5P29400 RNU6-816P-201ENST00000390914 107 ntBASIC-1.54□□□□□ -2.66
COL4A5P29400 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.54□□□□□ -2.66
COL4A5P29400 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.54□□□□□ -2.66
COL4A5P29400 SNORD58.1-201ENST00000391313 66 ntBASIC-1.54□□□□□ -2.66
COL4A5P29400 MTND4P29-201ENST00000503122 1372 ntBASIC-1.54□□□□□ -2.66
COL4A5P29400 RNU6-832P-201ENST00000363319 107 ntBASIC-1.55□□□□□ -2.66
COL4A5P29400 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.55□□□□□ -2.66
COL4A5P29400 Y_RNA.20-201ENST00000362479 113 ntBASIC-1.55□□□□□ -2.66
COL4A5P29400 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.55□□□□□ -2.66
COL4A5P29400 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.55□□□□□ -2.66
COL4A5P29400 RNU6-644P-201ENST00000391155 98 ntBASIC-1.55□□□□□ -2.66
COL4A5P29400 snoU13.17-201ENST00000458802 104 ntBASIC-1.55□□□□□ -2.66
COL4A5P29400 SNORD4B-201ENST00000459083 72 ntBASIC-1.55□□□□□ -2.66
COL4A5P29400 snoU13.10-201ENST00000459301 103 ntBASIC-1.55□□□□□ -2.66
COL4A5P29400 RNU6-1121P-201ENST00000516802 109 ntBASIC-1.55□□□□□ -2.66
COL4A5P29400 MIR3657-201ENST00000584818 117 ntBASIC-1.55□□□□□ -2.66
COL4A5P29400 MIR6739-201ENST00000622461 75 ntBASIC-1.55□□□□□ -2.66
COL4A5P29400 SNORA24B-201ENST00000384176 131 ntBASIC-1.56□□□□□ -2.66
COL4A5P29400 RNU2-38P-201ENST00000410856 79 ntBASIC-1.56□□□□□ -2.66
COL4A5P29400 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.56□□□□□ -2.66
COL4A5P29400 SNORD45B-201ENST00000364617 72 ntBASIC-1.57□□□□□ -2.66
COL4A5P29400 RNU6-382P-201ENST00000365181 106 ntBASIC-1.57□□□□□ -2.66
COL4A5P29400 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.58□□□□□ -2.66
COL4A5P29400 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.58□□□□□ -2.66
COL4A5P29400 Y_RNA.422-201ENST00000384054 114 ntBASIC-1.58□□□□□ -2.66
COL4A5P29400 RNU6-519P-201ENST00000410590 108 ntBASIC-1.58□□□□□ -2.66
COL4A5P29400 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.58□□□□□ -2.66
COL4A5P29400 RNU6-608P-201ENST00000383927 104 ntBASIC-1.58□□□□□ -2.66
COL4A5P29400 RNU6-246P-201ENST00000384702 107 ntBASIC-1.58□□□□□ -2.66
COL4A5P29400 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.58□□□□□ -2.66
COL4A5P29400 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.58□□□□□ -2.66
COL4A5P29400 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.58□□□□□ -2.66
COL4A5P29400 AC020661.2-201ENST00000560114 134 ntBASIC-1.58□□□□□ -2.66
COL4A5P29400 MIR3064-201ENST00000581130 66 ntBASIC-1.58□□□□□ -2.66
COL4A5P29400 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.58□□□□□ -2.66
COL4A5P29400 MIR3658-201ENST00000636291 56 ntBASIC-1.58□□□□□ -2.66
COL4A5P29400 Y_RNA.138-201ENST00000363462 102 ntBASIC-1.59□□□□□ -2.66
COL4A5P29400 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.59□□□□□ -2.66
COL4A5P29400 RNU6-563P-201ENST00000364872 108 ntBASIC-1.59□□□□□ -2.66
COL4A5P29400 SNORD115-31-201ENST00000365318 82 ntBASIC-1.59□□□□□ -2.66
COL4A5P29400 RNU6-1227P-201ENST00000383981 107 ntBASIC-1.59□□□□□ -2.66
COL4A5P29400 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.59□□□□□ -2.66
COL4A5P29400 RNU6-630P-201ENST00000391258 106 ntBASIC-1.59□□□□□ -2.66
COL4A5P29400 SNORA18.5-201ENST00000516616 101 ntBASIC-1.59□□□□□ -2.66
COL4A5P29400 MIR4773-1-201ENST00000637203 78 ntBASIC-1.59□□□□□ -2.66
COL4A5P29400 RNU6-1020P-201ENST00000363684 107 ntBASIC-1.6□□□□□ -2.67
COL4A5P29400 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.6□□□□□ -2.67
COL4A5P29400 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.6□□□□□ -2.67
COL4A5P29400 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.6□□□□□ -2.67
COL4A5P29400 AP001340.1-201ENST00000624405 217 ntBASIC-1.6□□□□□ -2.67
COL4A5P29400 RNU6-681P-201ENST00000364012 104 ntBASIC-1.61□□□□□ -2.67
COL4A5P29400 Y_RNA.200-201ENST00000364018 102 ntBASIC-1.61□□□□□ -2.67
COL4A5P29400 MIR4694-201ENST00000578534 80 ntBASIC-1.61□□□□□ -2.67
COL4A5P29400 MIR548S-201ENST00000581352 82 ntBASIC-1.61□□□□□ -2.67
COL4A5P29400 AC025166.1-201ENST00000612411 163 ntBASIC-1.61□□□□□ -2.67
COL4A5P29400 FTX_4.1-201ENST00000616291 147 ntBASIC-1.61□□□□□ -2.67
COL4A5P29400 RNU6-766P-201ENST00000362478 107 ntBASIC-1.61□□□□□ -2.67
COL4A5P29400 Y_RNA.216-201ENST00000364205 93 ntBASIC-1.61□□□□□ -2.67
COL4A5P29400 RNU6-915P-201ENST00000364943 103 ntBASIC-1.61□□□□□ -2.67
COL4A5P29400 Y_RNA.396-201ENST00000383949 103 ntBASIC-1.61□□□□□ -2.67
COL4A5P29400 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.61□□□□□ -2.67
COL4A5P29400 Y_RNA.574-201ENST00000384766 95 ntBASIC-1.61□□□□□ -2.67
COL4A5P29400 Y_RNA.701-201ENST00000516812 110 ntBASIC-1.61□□□□□ -2.67
COL4A5P29400 Y_RNA.47-201ENST00000362697 108 ntBASIC-1.62□□□□□ -2.67
COL4A5P29400 RNU6-1283P-201ENST00000365314 105 ntBASIC-1.62□□□□□ -2.67
COL4A5P29400 Y_RNA.478-201ENST00000384358 107 ntBASIC-1.62□□□□□ -2.67
COL4A5P29400 AL118496.2-201ENST00000448300 230 ntBASIC-1.62□□□□□ -2.67
COL4A5P29400 RNU6-1219P-201ENST00000516143 112 ntBASIC-1.62□□□□□ -2.67
COL4A5P29400 AC104996.3-201ENST00000590718 94 ntBASIC-1.62□□□□□ -2.67
COL4A5P29400 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.63□□□□□ -2.67
COL4A5P29400 AL021921.1-201ENST00000442774 93 ntBASIC-1.63□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 173.8 ms