Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 SNORA33.2-201ENST00000365413 134 ntBASIC-2.73□□□□□ -2.85
APOEP02649 AC018880.2-201ENST00000414265 201 ntBASIC-2.73□□□□□ -2.85
APOEP02649 MTND3P2-201ENST00000438452 342 ntBASIC-2.73□□□□□ -2.85
APOEP02649 AC022559.1-201ENST00000520905 205 ntBASIC-2.73□□□□□ -2.85
APOEP02649 RNU5F-1-201ENST00000362507 117 ntBASIC-2.74□□□□□ -2.85
APOEP02649 RNU4-40P-201ENST00000364351 143 ntBASIC-2.74□□□□□ -2.85
APOEP02649 AC020661.2-201ENST00000560114 134 ntBASIC-2.74□□□□□ -2.85
APOEP02649 MIR4439-201ENST00000583746 80 ntBASIC-2.74□□□□□ -2.85
APOEP02649 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.75□□□□□ -2.85
APOEP02649 MIR548AG1-201ENST00000579932 66 ntBASIC-2.75□□□□□ -2.85
APOEP02649 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.75□□□□□ -2.85
APOEP02649 Y_RNA.10-201ENST00000362371 110 ntBASIC-2.76□□□□□ -2.85
APOEP02649 RNU6-79P-201ENST00000362511 107 ntBASIC-2.76□□□□□ -2.85
APOEP02649 RNY3P2-201ENST00000362918 102 ntBASIC-2.76□□□□□ -2.85
APOEP02649 RNU6-774P-201ENST00000363238 107 ntBASIC-2.76□□□□□ -2.85
APOEP02649 Y_RNA.202-201ENST00000364083 110 ntBASIC-2.76□□□□□ -2.85
APOEP02649 RNU6-813P-201ENST00000384691 107 ntBASIC-2.76□□□□□ -2.85
APOEP02649 Y_RNA.574-201ENST00000384766 95 ntBASIC-2.76□□□□□ -2.85
APOEP02649 AL021921.1-201ENST00000442774 93 ntBASIC-2.76□□□□□ -2.85
APOEP02649 RNU6-1153P-201ENST00000516760 105 ntBASIC-2.76□□□□□ -2.85
APOEP02649 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-2.76□□□□□ -2.85
APOEP02649 DLEU2_3.2-201ENST00000612883 73 ntBASIC-2.76□□□□□ -2.85
APOEP02649 Y_RNA.20-201ENST00000362479 113 ntBASIC-2.77□□□□□ -2.85
APOEP02649 RNU6-246P-201ENST00000384702 107 ntBASIC-2.77□□□□□ -2.85
APOEP02649 MIR6739-201ENST00000622461 75 ntBASIC-2.77□□□□□ -2.85
APOEP02649 RNY4P27-201ENST00000363341 96 ntBASIC-2.78□□□□□ -2.85
APOEP02649 Y_RNA.467-201ENST00000384297 102 ntBASIC-2.78□□□□□ -2.85
APOEP02649 Y_RNA.509-201ENST00000384506 99 ntBASIC-2.78□□□□□ -2.85
APOEP02649 AL158147.1-201ENST00000443970 75 ntBASIC-2.78□□□□□ -2.85
APOEP02649 RNU4-71P-201ENST00000516258 113 ntBASIC-2.78□□□□□ -2.85
APOEP02649 Y_RNA.309-201ENST00000365046 111 ntBASIC-2.79□□□□□ -2.86
APOEP02649 RNU6-639P-201ENST00000384074 107 ntBASIC-2.79□□□□□ -2.86
APOEP02649 RNU6-118P-201ENST00000516552 102 ntBASIC-2.79□□□□□ -2.86
APOEP02649 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.79□□□□□ -2.86
APOEP02649 Y_RNA.95-201ENST00000363079 95 ntBASIC-2.8□□□□□ -2.86
APOEP02649 SNORD45B-201ENST00000364617 72 ntBASIC-2.8□□□□□ -2.86
APOEP02649 RNU6-980P-201ENST00000516925 103 ntBASIC-2.8□□□□□ -2.86
APOEP02649 U6.81-201ENST00000612550 106 ntBASIC-2.8□□□□□ -2.86
APOEP02649 Y_RNA.340-201ENST00000365330 92 ntBASIC-2.81□□□□□ -2.86
APOEP02649 Y_RNA.563-201ENST00000384707 108 ntBASIC-2.81□□□□□ -2.86
APOEP02649 AC025166.1-201ENST00000612411 163 ntBASIC-2.81□□□□□ -2.86
APOEP02649 RNU6-695P-201ENST00000391157 104 ntBASIC-2.82□□□□□ -2.86
APOEP02649 MIR548Q-201ENST00000408404 100 ntBASIC-2.82□□□□□ -2.86
APOEP02649 RNU6-1174P-201ENST00000517278 101 ntBASIC-2.82□□□□□ -2.86
APOEP02649 AC141273.2-201ENST00000618989 130 ntBASIC-2.82□□□□□ -2.86
APOEP02649 Y_RNA.460-201ENST00000384255 102 ntBASIC-2.83□□□□□ -2.86
APOEP02649 RNU6-1247P-201ENST00000516622 98 ntBASIC-2.83□□□□□ -2.86
APOEP02649 RNA5SP405-201ENST00000363059 114 ntBASIC-2.85□□□□□ -2.87
APOEP02649 AL035470.1-201ENST00000622571 220 ntBASIC-2.85□□□□□ -2.87
APOEP02649 Y_RNA.603-201ENST00000410571 108 ntBASIC-2.86□□□□□ -2.87
APOEP02649 AP001340.1-201ENST00000624405 217 ntBASIC-2.86□□□□□ -2.87
APOEP02649 Y_RNA.200-201ENST00000364018 102 ntBASIC-2.87□□□□□ -2.87
APOEP02649 MIR548S-201ENST00000581352 82 ntBASIC-2.87□□□□□ -2.87
APOEP02649 Y_RNA.144-201ENST00000363521 113 ntBASIC-2.88□□□□□ -2.87
APOEP02649 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.88□□□□□ -2.87
APOEP02649 RNU6-841P-201ENST00000383872 107 ntBASIC-2.88□□□□□ -2.87
APOEP02649 RNU6-194P-201ENST00000363862 105 ntBASIC-2.89□□□□□ -2.87
APOEP02649 RNU6-119P-201ENST00000364882 107 ntBASIC-2.89□□□□□ -2.87
APOEP02649 SNORD58C-201ENST00000365223 64 ntBASIC-2.89□□□□□ -2.87
APOEP02649 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.89□□□□□ -2.87
APOEP02649 SNORA81.3-201ENST00000517283 198 ntBASIC-2.89□□□□□ -2.87
APOEP02649 MIR3139-201ENST00000579145 76 ntBASIC-2.89□□□□□ -2.87
APOEP02649 MIR548AM-201ENST00000584298 74 ntBASIC-2.89□□□□□ -2.87
APOEP02649 Y_RNA.29-201ENST00000362570 113 ntBASIC-2.9□□□□□ -2.87
APOEP02649 RNU6-1061P-201ENST00000516530 99 ntBASIC-2.9□□□□□ -2.87
APOEP02649 RNU6-111P-201ENST00000517179 105 ntBASIC-2.9□□□□□ -2.87
APOEP02649 MIR3123-201ENST00000583417 75 ntBASIC-2.9□□□□□ -2.87
APOEP02649 Y_RNA.11-201ENST00000362375 109 ntBASIC-2.91□□□□□ -2.88
APOEP02649 Y_RNA.346-201ENST00000365385 112 ntBASIC-2.91□□□□□ -2.88
APOEP02649 MIR513C-201ENST00000401352 84 ntBASIC-2.91□□□□□ -2.88
APOEP02649 RNU6-1064P-201ENST00000410626 104 ntBASIC-2.91□□□□□ -2.88
APOEP02649 RNU6-1135P-201ENST00000411083 103 ntBASIC-2.91□□□□□ -2.88
APOEP02649 MIR4777-201ENST00000583710 86 ntBASIC-2.91□□□□□ -2.88
APOEP02649 Y_RNA.272-201ENST00000364696 102 ntBASIC-2.92□□□□□ -2.88
APOEP02649 Y_RNA.478-201ENST00000384358 107 ntBASIC-2.92□□□□□ -2.88
APOEP02649 MIR548F4-201ENST00000408515 105 ntBASIC-2.92□□□□□ -2.88
APOEP02649 MIR3128-201ENST00000581957 66 ntBASIC-2.92□□□□□ -2.88
APOEP02649 Y_RNA.778-201ENST00000620203 90 ntBASIC-2.92□□□□□ -2.88
APOEP02649 RNU6-478P-201ENST00000363904 110 ntBASIC-2.93□□□□□ -2.88
APOEP02649 AC072026.1-201ENST00000605023 201 ntBASIC-2.93□□□□□ -2.88
APOEP02649 Y_RNA.420-201ENST00000384043 110 ntBASIC-2.94□□□□□ -2.88
APOEP02649 RNU6-1113P-201ENST00000384348 107 ntBASIC-2.94□□□□□ -2.88
APOEP02649 Y_RNA.606-201ENST00000410579 103 ntBASIC-2.94□□□□□ -2.88
APOEP02649 RNU6-752P-201ENST00000516376 102 ntBASIC-2.94□□□□□ -2.88
APOEP02649 MIR4679-2-201ENST00000578358 77 ntBASIC-2.94□□□□□ -2.88
APOEP02649 U7.2-201ENST00000607576 63 ntBASIC-2.94□□□□□ -2.88
APOEP02649 U2.7-201ENST00000619197 100 ntBASIC-2.94□□□□□ -2.88
APOEP02649 Y_RNA.240-201ENST00000364469 95 ntBASIC-2.95□□□□□ -2.88
APOEP02649 MIR496-201ENST00000385226 102 ntBASIC-2.95□□□□□ -2.88
APOEP02649 RNU4-88P-201ENST00000411220 86 ntBASIC-2.95□□□□□ -2.88
APOEP02649 RNU6-795P-201ENST00000516323 103 ntBASIC-2.95□□□□□ -2.88
APOEP02649 RNU6-656P-201ENST00000516785 107 ntBASIC-2.95□□□□□ -2.88
APOEP02649 Y_RNA.720-201ENST00000517166 92 ntBASIC-2.95□□□□□ -2.88
APOEP02649 MIR4796-201ENST00000580742 81 ntBASIC-2.95□□□□□ -2.88
APOEP02649 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.95□□□□□ -2.88
APOEP02649 Y_RNA.350-201ENST00000365409 98 ntBASIC-2.96□□□□□ -2.88
APOEP02649 RNY3P14-201ENST00000384309 102 ntBASIC-2.96□□□□□ -2.88
APOEP02649 Y_RNA.475-201ENST00000384345 101 ntBASIC-2.96□□□□□ -2.88
APOEP02649 AL118496.2-201ENST00000448300 230 ntBASIC-2.96□□□□□ -2.88
APOEP02649 Y_RNA.680-201ENST00000516441 93 ntBASIC-2.96□□□□□ -2.88
Retrieved 100 of 98,524 protein–RNA pairs in 341.3 ms