Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 AL160413.1-201ENST00000622780 310 ntBASIC-2.83□□□□□ -2.86
HMGB3O15347 RNU6-474P-201ENST00000384243 107 ntBASIC-2.84□□□□□ -2.86
HMGB3O15347 RNU5F-1-201ENST00000362507 117 ntBASIC-2.85□□□□□ -2.87
HMGB3O15347 RNU6-832P-201ENST00000363319 107 ntBASIC-2.85□□□□□ -2.87
HMGB3O15347 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.85□□□□□ -2.87
HMGB3O15347 RNU6-875P-201ENST00000516488 106 ntBASIC-2.86□□□□□ -2.87
HMGB3O15347 U6.81-201ENST00000612550 106 ntBASIC-2.86□□□□□ -2.87
HMGB3O15347 RNU6-519P-201ENST00000410590 108 ntBASIC-2.87□□□□□ -2.87
HMGB3O15347 RNA5SP93-201ENST00000362525 114 ntBASIC-2.88□□□□□ -2.87
HMGB3O15347 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.88□□□□□ -2.87
HMGB3O15347 Y_RNA.403-201ENST00000383977 101 ntBASIC-2.88□□□□□ -2.87
HMGB3O15347 MIR4795-201ENST00000584182 89 ntBASIC-2.88□□□□□ -2.87
HMGB3O15347 AC103810.7-201ENST00000607821 91 ntBASIC-2.88□□□□□ -2.87
HMGB3O15347 U6atac.1-201ENST00000616025 117 ntBASIC-2.88□□□□□ -2.87
HMGB3O15347 Y_RNA.512-201ENST00000384518 102 ntBASIC-2.89□□□□□ -2.87
HMGB3O15347 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.89□□□□□ -2.87
HMGB3O15347 MIR8062-201ENST00000621515 85 ntBASIC-2.89□□□□□ -2.87
HMGB3O15347 Y_RNA.144-201ENST00000363521 113 ntBASIC-2.9□□□□□ -2.87
HMGB3O15347 RNU6-841P-201ENST00000383872 107 ntBASIC-2.9□□□□□ -2.87
HMGB3O15347 RNU6-813P-201ENST00000384691 107 ntBASIC-2.9□□□□□ -2.87
HMGB3O15347 SNORD58.1-201ENST00000391313 66 ntBASIC-2.9□□□□□ -2.87
HMGB3O15347 MIR548AM-201ENST00000584298 74 ntBASIC-2.9□□□□□ -2.87
HMGB3O15347 RNY3P2-201ENST00000362918 102 ntBASIC-2.91□□□□□ -2.88
HMGB3O15347 RNU6-915P-201ENST00000364943 103 ntBASIC-2.91□□□□□ -2.88
HMGB3O15347 Y_RNA.400-201ENST00000383963 111 ntBASIC-2.91□□□□□ -2.88
HMGB3O15347 Y_RNA.431-201ENST00000384086 102 ntBASIC-2.91□□□□□ -2.88
HMGB3O15347 MTND2P23-201ENST00000422990 651 ntBASIC-2.91□□□□□ -2.88
HMGB3O15347 RNU7-197P-201ENST00000458836 62 ntBASIC-2.91□□□□□ -2.88
HMGB3O15347 RNU4-88P-201ENST00000411220 86 ntBASIC-2.92□□□□□ -2.88
HMGB3O15347 RNU6-1137P-201ENST00000517073 99 ntBASIC-2.92□□□□□ -2.88
HMGB3O15347 MIR3613-201ENST00000579844 87 ntBASIC-2.92□□□□□ -2.88
HMGB3O15347 DLEU2_3.2-201ENST00000612883 73 ntBASIC-2.92□□□□□ -2.88
HMGB3O15347 RNU6-478P-201ENST00000363904 110 ntBASIC-2.93□□□□□ -2.88
HMGB3O15347 RNY4P7-201ENST00000364600 96 ntBASIC-2.93□□□□□ -2.88
HMGB3O15347 RNU6-985P-201ENST00000410182 104 ntBASIC-2.93□□□□□ -2.88
HMGB3O15347 RNU6-1153P-201ENST00000516760 105 ntBASIC-2.93□□□□□ -2.88
HMGB3O15347 MIR3123-201ENST00000583417 75 ntBASIC-2.93□□□□□ -2.88
HMGB3O15347 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.94□□□□□ -2.88
HMGB3O15347 Y_RNA.419-201ENST00000384041 102 ntBASIC-2.94□□□□□ -2.88
HMGB3O15347 Y_RNA.525-201ENST00000384570 113 ntBASIC-2.94□□□□□ -2.88
HMGB3O15347 RNU6-1219P-201ENST00000516143 112 ntBASIC-2.94□□□□□ -2.88
HMGB3O15347 RNU6-752P-201ENST00000516376 102 ntBASIC-2.94□□□□□ -2.88
HMGB3O15347 Y_RNA.95-201ENST00000363079 95 ntBASIC-2.95□□□□□ -2.88
HMGB3O15347 SNORD45B-201ENST00000364617 72 ntBASIC-2.95□□□□□ -2.88
HMGB3O15347 Y_RNA.309-201ENST00000365046 111 ntBASIC-2.95□□□□□ -2.88
HMGB3O15347 RNU6-608P-201ENST00000383927 104 ntBASIC-2.95□□□□□ -2.88
HMGB3O15347 Y_RNA.606-201ENST00000410579 103 ntBASIC-2.95□□□□□ -2.88
HMGB3O15347 RNU6-781P-201ENST00000516377 101 ntBASIC-2.95□□□□□ -2.88
HMGB3O15347 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-2.95□□□□□ -2.88
HMGB3O15347 RNU6-807P-201ENST00000516805 107 ntBASIC-2.96□□□□□ -2.88
HMGB3O15347 MIR23C-201ENST00000579846 100 ntBASIC-2.96□□□□□ -2.88
HMGB3O15347 RNU6-1094P-201ENST00000362416 104 ntBASIC-2.97□□□□□ -2.88
HMGB3O15347 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.97□□□□□ -2.88
HMGB3O15347 RNU6-1113P-201ENST00000384348 107 ntBASIC-2.97□□□□□ -2.88
HMGB3O15347 RNU6-460P-201ENST00000391158 108 ntBASIC-2.97□□□□□ -2.88
HMGB3O15347 AL118496.2-201ENST00000448300 230 ntBASIC-2.97□□□□□ -2.88
HMGB3O15347 U2.7-201ENST00000619197 100 ntBASIC-2.97□□□□□ -2.88
HMGB3O15347 Y_RNA.467-201ENST00000384297 102 ntBASIC-2.99□□□□□ -2.89
HMGB3O15347 AL158147.1-201ENST00000443970 75 ntBASIC-2.99□□□□□ -2.89
HMGB3O15347 MIR466-201ENST00000580653 84 ntBASIC-2.99□□□□□ -2.89
HMGB3O15347 RBMX2P4-201ENST00000441256 376 ntBASIC-3□□□□□ -2.89
HMGB3O15347 RNU6-656P-201ENST00000516785 107 ntBASIC-3□□□□□ -2.89
HMGB3O15347 AC134503.1-201ENST00000633048 54 ntBASIC-3.01□□□□□ -2.89
HMGB3O15347 Y_RNA.257-201ENST00000364596 102 ntBASIC-3.02□□□□□ -2.89
HMGB3O15347 Y_RNA.563-201ENST00000384707 108 ntBASIC-3.02□□□□□ -2.89
HMGB3O15347 RNU6-696P-201ENST00000390834 107 ntBASIC-3.02□□□□□ -2.89
HMGB3O15347 RNU6-630P-201ENST00000391258 106 ntBASIC-3.02□□□□□ -2.89
HMGB3O15347 MTND4P29-201ENST00000503122 1372 ntBASIC-3.02□□□□□ -2.89
HMGB3O15347 Y_RNA.233-201ENST00000364407 101 ntBASIC-3.03□□□□□ -2.89
HMGB3O15347 RNU4-11P-201ENST00000365287 132 ntBASIC-3.03□□□□□ -2.89
HMGB3O15347 AP001340.1-201ENST00000624405 217 ntBASIC-3.03□□□□□ -2.89
HMGB3O15347 Y_RNA.236-201ENST00000364427 111 ntBASIC-3.04□□□□□ -2.9
HMGB3O15347 RNU6-458P-201ENST00000384179 107 ntBASIC-3.04□□□□□ -2.9
HMGB3O15347 RNU6-635P-201ENST00000516651 102 ntBASIC-3.04□□□□□ -2.9
HMGB3O15347 AC120024.2-201ENST00000576526 175 ntBASIC-3.04□□□□□ -2.9
HMGB3O15347 MIR4679-2-201ENST00000578358 77 ntBASIC-3.04□□□□□ -2.9
HMGB3O15347 AC025166.1-201ENST00000612411 163 ntBASIC-3.04□□□□□ -2.9
HMGB3O15347 U6.58-201ENST00000613107 107 ntBASIC-3.04□□□□□ -2.9
HMGB3O15347 RNU6-1020P-201ENST00000363684 107 ntBASIC-3.05□□□□□ -2.9
HMGB3O15347 RNU6-1152P-201ENST00000384576 107 ntBASIC-3.05□□□□□ -2.9
HMGB3O15347 Y_RNA.20-201ENST00000362479 113 ntBASIC-3.06□□□□□ -2.9
HMGB3O15347 SNORA33.2-201ENST00000365413 134 ntBASIC-3.06□□□□□ -2.9
HMGB3O15347 Y_RNA.449-201ENST00000384187 102 ntBASIC-3.06□□□□□ -2.9
HMGB3O15347 MIR520D-201ENST00000385002 87 ntBASIC-3.06□□□□□ -2.9
HMGB3O15347 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-3.06□□□□□ -2.9
HMGB3O15347 RNU6-1262P-201ENST00000516217 96 ntBASIC-3.07□□□□□ -2.9
HMGB3O15347 RNU4-71P-201ENST00000516258 113 ntBASIC-3.07□□□□□ -2.9
HMGB3O15347 MIR4777-201ENST00000583710 86 ntBASIC-3.07□□□□□ -2.9
HMGB3O15347 Y_RNA.216-201ENST00000364205 93 ntBASIC-3.08□□□□□ -2.9
HMGB3O15347 RNU6-563P-201ENST00000364872 108 ntBASIC-3.08□□□□□ -2.9
HMGB3O15347 Y_RNA.396-201ENST00000383949 103 ntBASIC-3.08□□□□□ -2.9
HMGB3O15347 SNORA81.3-201ENST00000517283 198 ntBASIC-3.08□□□□□ -2.9
HMGB3O15347 MIR4748-201ENST00000578076 82 ntBASIC-3.08□□□□□ -2.9
HMGB3O15347 MIR4796-201ENST00000580742 81 ntBASIC-3.08□□□□□ -2.9
HMGB3O15347 RNU6-258P-201ENST00000390884 101 ntBASIC-3.09□□□□□ -2.9
HMGB3O15347 RNU6-1034P-201ENST00000365335 101 ntBASIC-3.1□□□□□ -2.91
HMGB3O15347 MIR548A3-201ENST00000385297 97 ntBASIC-3.1□□□□□ -2.91
HMGB3O15347 MT-TD-201ENST00000387419 68 ntBASIC-3.1□□□□□ -2.91
HMGB3O15347 RNU6-1135P-201ENST00000411083 103 ntBASIC-3.1□□□□□ -2.91
HMGB3O15347 RNU6-1191P-201ENST00000516799 107 ntBASIC-3.1□□□□□ -2.91
Retrieved 100 of 98,524 protein–RNA pairs in 233.5 ms