Protein–RNA interactions for Protein: A0A0B4J1U6

TRBV9, T-cell receptor beta variable 9 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV9A0A0B4J1U6 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.72□□□□□ -2.68
TRBV9A0A0B4J1U6 MIR1255B2-201ENST00000408618 67 ntBASIC-1.72□□□□□ -2.68
TRBV9A0A0B4J1U6 SNX3P1X-201ENST00000414887 175 ntBASIC-1.72□□□□□ -2.68
TRBV9A0A0B4J1U6 MIR3144-201ENST00000579460 79 ntBASIC-1.72□□□□□ -2.68
TRBV9A0A0B4J1U6 MIR6509-201ENST00000614603 85 ntBASIC-1.72□□□□□ -2.68
TRBV9A0A0B4J1U6 MIR6888-201ENST00000621977 67 ntBASIC-1.72□□□□□ -2.68
TRBV9A0A0B4J1U6 SNORA33.1-201ENST00000364957 130 ntBASIC-1.73□□□□□ -2.69
TRBV9A0A0B4J1U6 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.73□□□□□ -2.69
TRBV9A0A0B4J1U6 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.73□□□□□ -2.69
TRBV9A0A0B4J1U6 RNU6-574P-201ENST00000384265 107 ntBASIC-1.73□□□□□ -2.69
TRBV9A0A0B4J1U6 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.73□□□□□ -2.69
TRBV9A0A0B4J1U6 MIR889-201ENST00000401280 79 ntBASIC-1.73□□□□□ -2.69
TRBV9A0A0B4J1U6 RNU4-61P-201ENST00000411243 107 ntBASIC-1.73□□□□□ -2.69
TRBV9A0A0B4J1U6 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.73□□□□□ -2.69
TRBV9A0A0B4J1U6 MIR4520-1-201ENST00000582609 70 ntBASIC-1.73□□□□□ -2.69
TRBV9A0A0B4J1U6 AC004792.1-201ENST00000614523 137 ntBASIC-1.73□□□□□ -2.69
TRBV9A0A0B4J1U6 AL627230.5-201ENST00000619807 58 ntBASIC-1.73□□□□□ -2.69
TRBV9A0A0B4J1U6 SNORA2.1-201ENST00000363089 137 ntBASIC-1.74□□□□□ -2.69
TRBV9A0A0B4J1U6 MIR203A-201ENST00000384836 110 ntBASIC-1.74□□□□□ -2.69
TRBV9A0A0B4J1U6 MIR5009-201ENST00000578736 100 ntBASIC-1.74□□□□□ -2.69
TRBV9A0A0B4J1U6 MIR1246-201ENST00000636535 73 ntBASIC-1.74□□□□□ -2.69
TRBV9A0A0B4J1U6 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.75□□□□□ -2.69
TRBV9A0A0B4J1U6 SNORD90-201ENST00000391145 111 ntBASIC-1.75□□□□□ -2.69
TRBV9A0A0B4J1U6 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.75□□□□□ -2.69
TRBV9A0A0B4J1U6 RNA5SP272-201ENST00000516095 111 ntBASIC-1.75□□□□□ -2.69
TRBV9A0A0B4J1U6 MIR1285-2-201ENST00000408311 88 ntBASIC-1.76□□□□□ -2.69
TRBV9A0A0B4J1U6 AL691482.2-201ENST00000457453 84 ntBASIC-1.76□□□□□ -2.69
TRBV9A0A0B4J1U6 RNA5SP180-201ENST00000516181 101 ntBASIC-1.76□□□□□ -2.69
TRBV9A0A0B4J1U6 RNU6-426P-201ENST00000516464 97 ntBASIC-1.76□□□□□ -2.69
TRBV9A0A0B4J1U6 MIR6502-201ENST00000617296 76 ntBASIC-1.76□□□□□ -2.69
TRBV9A0A0B4J1U6 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.77□□□□□ -2.69
TRBV9A0A0B4J1U6 MIR3657-201ENST00000584818 117 ntBASIC-1.77□□□□□ -2.69
TRBV9A0A0B4J1U6 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.77□□□□□ -2.69
TRBV9A0A0B4J1U6 MIR198-201ENST00000637333 62 ntBASIC-1.77□□□□□ -2.69
TRBV9A0A0B4J1U6 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.78□□□□□ -2.69
TRBV9A0A0B4J1U6 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.78□□□□□ -2.69
TRBV9A0A0B4J1U6 RNU6-158P-201ENST00000517104 100 ntBASIC-1.78□□□□□ -2.69
TRBV9A0A0B4J1U6 CYP3A54P-201ENST00000566950 75 ntBASIC-1.78□□□□□ -2.69
TRBV9A0A0B4J1U6 RNU6-824P-201ENST00000363724 104 ntBASIC-1.79□□□□□ -2.7
TRBV9A0A0B4J1U6 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.79□□□□□ -2.7
TRBV9A0A0B4J1U6 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.79□□□□□ -2.7
TRBV9A0A0B4J1U6 MTND4LP9-201ENST00000427694 174 ntBASIC-1.8□□□□□ -2.7
TRBV9A0A0B4J1U6 RNU6-795P-201ENST00000516323 103 ntBASIC-1.8□□□□□ -2.7
TRBV9A0A0B4J1U6 MIR4777-201ENST00000583710 86 ntBASIC-1.8□□□□□ -2.7
TRBV9A0A0B4J1U6 SNORD115-33-201ENST00000363723 82 ntBASIC-1.81□□□□□ -2.7
TRBV9A0A0B4J1U6 RNU6-379P-201ENST00000363813 104 ntBASIC-1.81□□□□□ -2.7
TRBV9A0A0B4J1U6 RNU6-746P-201ENST00000384112 109 ntBASIC-1.81□□□□□ -2.7
TRBV9A0A0B4J1U6 RNU6-463P-201ENST00000384340 107 ntBASIC-1.81□□□□□ -2.7
TRBV9A0A0B4J1U6 SNORA26.4-201ENST00000391188 123 ntBASIC-1.81□□□□□ -2.7
TRBV9A0A0B4J1U6 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-1.81□□□□□ -2.7
TRBV9A0A0B4J1U6 RNU6-388P-201ENST00000517012 105 ntBASIC-1.81□□□□□ -2.7
TRBV9A0A0B4J1U6 RNU6-389P-201ENST00000517048 105 ntBASIC-1.81□□□□□ -2.7
TRBV9A0A0B4J1U6 SNORA40-201ENST00000388090 126 ntBASIC-1.82□□□□□ -2.7
TRBV9A0A0B4J1U6 SNORD63.1-201ENST00000516178 80 ntBASIC-1.82□□□□□ -2.7
TRBV9A0A0B4J1U6 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.82□□□□□ -2.7
TRBV9A0A0B4J1U6 AC091912.2-201ENST00000624798 167 ntBASIC-1.82□□□□□ -2.7
TRBV9A0A0B4J1U6 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.83□□□□□ -2.7
TRBV9A0A0B4J1U6 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.83□□□□□ -2.7
TRBV9A0A0B4J1U6 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.83□□□□□ -2.7
TRBV9A0A0B4J1U6 RNU6-972P-201ENST00000391208 107 ntBASIC-1.84□□□□□ -2.7
TRBV9A0A0B4J1U6 RNU7-154P-201ENST00000516194 62 ntBASIC-1.84□□□□□ -2.7
TRBV9A0A0B4J1U6 AC012531.4-201ENST00000616509 177 ntBASIC-1.84□□□□□ -2.7
TRBV9A0A0B4J1U6 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.85□□□□□ -2.71
TRBV9A0A0B4J1U6 RNU6-694P-201ENST00000364071 147 ntBASIC-1.85□□□□□ -2.71
TRBV9A0A0B4J1U6 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.85□□□□□ -2.71
TRBV9A0A0B4J1U6 RNU6-164P-201ENST00000364604 103 ntBASIC-1.85□□□□□ -2.71
TRBV9A0A0B4J1U6 RNU2-51P-201ENST00000410708 197 ntBASIC-1.85□□□□□ -2.71
TRBV9A0A0B4J1U6 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.85□□□□□ -2.71
TRBV9A0A0B4J1U6 MTND5P41-201ENST00000517498 206 ntBASIC-1.85□□□□□ -2.71
TRBV9A0A0B4J1U6 AL353621.2-201ENST00000605340 133 ntBASIC-1.85□□□□□ -2.71
TRBV9A0A0B4J1U6 MIR521-2-201ENST00000384818 87 ntBASIC-1.86□□□□□ -2.71
TRBV9A0A0B4J1U6 RNU6-182P-201ENST00000516970 105 ntBASIC-1.86□□□□□ -2.71
TRBV9A0A0B4J1U6 U6.81-201ENST00000612550 106 ntBASIC-1.86□□□□□ -2.71
TRBV9A0A0B4J1U6 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.86□□□□□ -2.71
TRBV9A0A0B4J1U6 RNA5SP26-201ENST00000362406 119 ntBASIC-1.87□□□□□ -2.71
TRBV9A0A0B4J1U6 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.87□□□□□ -2.71
TRBV9A0A0B4J1U6 MIR548A3-201ENST00000385297 97 ntBASIC-1.87□□□□□ -2.71
TRBV9A0A0B4J1U6 RNU7-107P-201ENST00000459121 61 ntBASIC-1.87□□□□□ -2.71
TRBV9A0A0B4J1U6 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.87□□□□□ -2.71
TRBV9A0A0B4J1U6 MIR6874-201ENST00000635894 71 ntBASIC-1.87□□□□□ -2.71
TRBV9A0A0B4J1U6 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.88□□□□□ -2.71
TRBV9A0A0B4J1U6 SNORD58A-201ENST00000383875 65 ntBASIC-1.88□□□□□ -2.71
TRBV9A0A0B4J1U6 MIR601-201ENST00000385256 79 ntBASIC-1.88□□□□□ -2.71
TRBV9A0A0B4J1U6 RNU6-887P-201ENST00000410660 100 ntBASIC-1.88□□□□□ -2.71
TRBV9A0A0B4J1U6 SCARNA15.1-201ENST00000516384 125 ntBASIC-1.88□□□□□ -2.71
TRBV9A0A0B4J1U6 RNU6-412P-201ENST00000516434 106 ntBASIC-1.88□□□□□ -2.71
TRBV9A0A0B4J1U6 MIR4796-201ENST00000580742 81 ntBASIC-1.88□□□□□ -2.71
TRBV9A0A0B4J1U6 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.88□□□□□ -2.71
TRBV9A0A0B4J1U6 MIR365A-201ENST00000362260 87 ntBASIC-1.89□□□□□ -2.71
TRBV9A0A0B4J1U6 RNU6-540P-201ENST00000384622 101 ntBASIC-1.89□□□□□ -2.71
TRBV9A0A0B4J1U6 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.89□□□□□ -2.71
TRBV9A0A0B4J1U6 RNU6-518P-201ENST00000516056 96 ntBASIC-1.89□□□□□ -2.71
TRBV9A0A0B4J1U6 SNORD33.1-201ENST00000516213 88 ntBASIC-1.89□□□□□ -2.71
TRBV9A0A0B4J1U6 RNA5SP86-201ENST00000390869 98 ntBASIC-1.9□□□□□ -2.71
TRBV9A0A0B4J1U6 MIR548H1-201ENST00000408610 102 ntBASIC-1.9□□□□□ -2.71
TRBV9A0A0B4J1U6 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.9□□□□□ -2.71
TRBV9A0A0B4J1U6 AL353691.2-201ENST00000443795 59 ntBASIC-1.9□□□□□ -2.71
TRBV9A0A0B4J1U6 MIR4441-201ENST00000582623 100 ntBASIC-1.9□□□□□ -2.71
TRBV9A0A0B4J1U6 U6.95-201ENST00000636931 70 ntBASIC-1.9□□□□□ -2.71
TRBV9A0A0B4J1U6 MIR3914-2-201ENST00000637339 95 ntBASIC-1.9□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 207 ms