Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 MIR6504-201ENST00000613520 61 ntBASIC1.25□□□□□ -2.21
PHACTR1Q9C0D0 AL353765.1-201ENST00000605514 183 ntBASIC1.24□□□□□ -2.21
PHACTR1Q9C0D0 MIR6078-201ENST00000611069 100 ntBASIC1.24□□□□□ -2.21
PHACTR1Q9C0D0 AL353770.2-201ENST00000620024 78 ntBASIC1.24□□□□□ -2.21
PHACTR1Q9C0D0 RNA5SP222-201ENST00000411039 105 ntBASIC1.23□□□□□ -2.21
PHACTR1Q9C0D0 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.23□□□□□ -2.21
PHACTR1Q9C0D0 RNU6-990P-201ENST00000364385 104 ntBASIC1.22□□□□□ -2.21
PHACTR1Q9C0D0 MIR1285-1-201ENST00000408593 84 ntBASIC1.22□□□□□ -2.21
PHACTR1Q9C0D0 MIR1276-201ENST00000408707 83 ntBASIC1.22□□□□□ -2.21
PHACTR1Q9C0D0 AC018659.1-201ENST00000551083 169 ntBASIC1.22□□□□□ -2.21
PHACTR1Q9C0D0 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
PHACTR1Q9C0D0 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.22
PHACTR1Q9C0D0 RNU6-668P-201ENST00000364180 107 ntBASIC1.21□□□□□ -2.22
PHACTR1Q9C0D0 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.21□□□□□ -2.22
PHACTR1Q9C0D0 SNORA40.17-201ENST00000517256 115 ntBASIC1.21□□□□□ -2.22
PHACTR1Q9C0D0 MIR7107-201ENST00000611489 80 ntBASIC1.21□□□□□ -2.22
PHACTR1Q9C0D0 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.2□□□□□ -2.22
PHACTR1Q9C0D0 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
PHACTR1Q9C0D0 RNU6-42P-201ENST00000384165 107 ntBASIC1.2□□□□□ -2.22
PHACTR1Q9C0D0 MIR4661-201ENST00000582720 75 ntBASIC1.2□□□□□ -2.22
PHACTR1Q9C0D0 MIR4511-201ENST00000582784 87 ntBASIC1.2□□□□□ -2.22
PHACTR1Q9C0D0 MIR4452-201ENST00000583004 71 ntBASIC1.2□□□□□ -2.22
PHACTR1Q9C0D0 AC103706.3-201ENST00000636297 85 ntBASIC1.2□□□□□ -2.22
PHACTR1Q9C0D0 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
PHACTR1Q9C0D0 RNU6-645P-201ENST00000364649 106 ntBASIC1.19□□□□□ -2.22
PHACTR1Q9C0D0 AC006210.1-201ENST00000424882 111 ntBASIC1.19□□□□□ -2.22
PHACTR1Q9C0D0 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.19□□□□□ -2.22
PHACTR1Q9C0D0 MIR6734-201ENST00000621166 68 ntBASIC1.19□□□□□ -2.22
PHACTR1Q9C0D0 Y_RNA.250-201ENST00000364542 110 ntBASIC1.18□□□□□ -2.22
PHACTR1Q9C0D0 RNA5SP220-201ENST00000516298 104 ntBASIC1.18□□□□□ -2.22
PHACTR1Q9C0D0 RNA5SP147-201ENST00000516493 109 ntBASIC1.18□□□□□ -2.22
PHACTR1Q9C0D0 Y_RNA.407-201ENST00000383986 113 ntBASIC1.17□□□□□ -2.22
PHACTR1Q9C0D0 MIR489-201ENST00000384923 84 ntBASIC1.17□□□□□ -2.22
PHACTR1Q9C0D0 SNORD110-201ENST00000408189 75 ntBASIC1.17□□□□□ -2.22
PHACTR1Q9C0D0 RNA5SP102-201ENST00000516865 106 ntBASIC1.17□□□□□ -2.22
PHACTR1Q9C0D0 MIR6739-201ENST00000622461 75 ntBASIC1.17□□□□□ -2.22
PHACTR1Q9C0D0 RNU6-1187P-201ENST00000364771 110 ntBASIC1.16□□□□□ -2.22
PHACTR1Q9C0D0 OR2A41P-201ENST00000473586 105 ntBASIC1.16□□□□□ -2.22
PHACTR1Q9C0D0 MIR4295-201ENST00000585286 85 ntBASIC1.16□□□□□ -2.22
PHACTR1Q9C0D0 AL109933.3-201ENST00000619095 188 ntBASIC1.16□□□□□ -2.22
PHACTR1Q9C0D0 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.15□□□□□ -2.22
PHACTR1Q9C0D0 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.22
PHACTR1Q9C0D0 AC103810.9-201ENST00000606688 112 ntBASIC1.15□□□□□ -2.23
PHACTR1Q9C0D0 SNORA36.2-201ENST00000384004 127 ntBASIC1.13□□□□□ -2.23
PHACTR1Q9C0D0 SCARNA17.3-201ENST00000516381 125 ntBASIC1.13□□□□□ -2.23
PHACTR1Q9C0D0 RNU6-656P-201ENST00000516785 107 ntBASIC1.13□□□□□ -2.23
PHACTR1Q9C0D0 SNORD114-22-201ENST00000365423 72 ntBASIC1.12□□□□□ -2.23
PHACTR1Q9C0D0 Y_RNA.375-201ENST00000365625 101 ntBASIC1.12□□□□□ -2.23
PHACTR1Q9C0D0 MIR4473-201ENST00000583731 91 ntBASIC1.12□□□□□ -2.23
PHACTR1Q9C0D0 RNY1P8-201ENST00000383970 114 ntBASIC1.11□□□□□ -2.23
PHACTR1Q9C0D0 RNU6-1162P-201ENST00000384443 104 ntBASIC1.11□□□□□ -2.23
PHACTR1Q9C0D0 MIR9-2-201ENST00000384838 87 ntBASIC1.11□□□□□ -2.23
PHACTR1Q9C0D0 MIR652-201ENST00000385278 98 ntBASIC1.11□□□□□ -2.23
PHACTR1Q9C0D0 MIR140-201ENST00000385282 100 ntBASIC1.11□□□□□ -2.23
PHACTR1Q9C0D0 RNU6-542P-201ENST00000516405 103 ntBASIC1.11□□□□□ -2.23
PHACTR1Q9C0D0 SNORA70.25-201ENST00000612741 95 ntBASIC1.11□□□□□ -2.23
PHACTR1Q9C0D0 RNA5SP517-201ENST00000364724 117 ntBASIC1.1□□□□□ -2.23
PHACTR1Q9C0D0 MIR608-201ENST00000384820 100 ntBASIC1.1□□□□□ -2.23
PHACTR1Q9C0D0 MIR548AE1-201ENST00000583292 70 ntBASIC1.1□□□□□ -2.23
PHACTR1Q9C0D0 AC021146.9-201ENST00000512503 156 ntBASIC1.09□□□□□ -2.23
PHACTR1Q9C0D0 MIR4752-201ENST00000579672 72 ntBASIC1.09□□□□□ -2.23
PHACTR1Q9C0D0 MIR521-2-201ENST00000384818 87 ntBASIC1.08□□□□□ -2.24
PHACTR1Q9C0D0 snoU13.13-201ENST00000458842 104 ntBASIC1.08□□□□□ -2.24
PHACTR1Q9C0D0 MIR5706-201ENST00000579841 80 ntBASIC1.08□□□□□ -2.24
PHACTR1Q9C0D0 AC092634.7-201ENST00000621022 103 ntBASIC1.08□□□□□ -2.24
PHACTR1Q9C0D0 RNA5SP215-201ENST00000363440 122 ntBASIC1.07□□□□□ -2.24
PHACTR1Q9C0D0 AC110620.1-201ENST00000416042 228 ntBASIC1.07□□□□□ -2.24
PHACTR1Q9C0D0 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.07□□□□□ -2.24
PHACTR1Q9C0D0 SNORA63.6-201ENST00000364921 119 ntBASIC1.06□□□□□ -2.24
PHACTR1Q9C0D0 RNU6-669P-201ENST00000365575 107 ntBASIC1.06□□□□□ -2.24
PHACTR1Q9C0D0 SNORA15B-2-201ENST00000384058 135 ntBASIC1.06□□□□□ -2.24
PHACTR1Q9C0D0 SNORA15B-1-201ENST00000384334 135 ntBASIC1.06□□□□□ -2.24
PHACTR1Q9C0D0 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.06□□□□□ -2.24
PHACTR1Q9C0D0 RNU6-1089P-201ENST00000516473 104 ntBASIC1.06□□□□□ -2.24
PHACTR1Q9C0D0 uc_338.10-201ENST00000621872 182 ntBASIC1.06□□□□□ -2.24
PHACTR1Q9C0D0 Y_RNA.633-201ENST00000459107 95 ntBASIC1.05□□□□□ -2.24
PHACTR1Q9C0D0 RPL39P28-201ENST00000465655 155 ntBASIC1.05□□□□□ -2.24
PHACTR1Q9C0D0 RNU1-29P-201ENST00000606574 126 ntBASIC1.05□□□□□ -2.24
PHACTR1Q9C0D0 SNORA25.18-201ENST00000607153 114 ntBASIC1.05□□□□□ -2.24
PHACTR1Q9C0D0 AC069271.1-201ENST00000445577 156 ntBASIC1.04□□□□□ -2.24
PHACTR1Q9C0D0 AL157398.1-201ENST00000452981 186 ntBASIC1.04□□□□□ -2.24
PHACTR1Q9C0D0 ACA64.5-201ENST00000516207 127 ntBASIC1.04□□□□□ -2.24
PHACTR1Q9C0D0 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
PHACTR1Q9C0D0 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
PHACTR1Q9C0D0 SNORD118-201ENST00000363593 134 ntBASIC1.03□□□□□ -2.24
PHACTR1Q9C0D0 MIR548E-201ENST00000408287 88 ntBASIC1.03□□□□□ -2.24
PHACTR1Q9C0D0 SNORA40.8-201ENST00000411034 126 ntBASIC1.03□□□□□ -2.24
PHACTR1Q9C0D0 HMGN2P22-201ENST00000427588 175 ntBASIC1.03□□□□□ -2.24
PHACTR1Q9C0D0 AC087343.1-201ENST00000477341 475 ntBASIC1.03□□□□□ -2.24
PHACTR1Q9C0D0 SNORD114-21-201ENST00000606412 72 ntBASIC1.03□□□□□ -2.24
PHACTR1Q9C0D0 MIR96-201ENST00000362288 78 ntBASIC1.02□□□□□ -2.25
PHACTR1Q9C0D0 SNORD114-27-201ENST00000363766 70 ntBASIC1.02□□□□□ -2.25
PHACTR1Q9C0D0 RNU4-38P-201ENST00000364472 129 ntBASIC1.02□□□□□ -2.25
PHACTR1Q9C0D0 MIR582-201ENST00000365731 98 ntBASIC1.02□□□□□ -2.25
PHACTR1Q9C0D0 RNU6-110P-201ENST00000384508 104 ntBASIC1.02□□□□□ -2.25
PHACTR1Q9C0D0 RNA5SP299-201ENST00000391203 116 ntBASIC1.02□□□□□ -2.25
PHACTR1Q9C0D0 MIR6515-201ENST00000619843 57 ntBASIC1.01□□□□□ -2.25
PHACTR1Q9C0D0 SNORD71-201ENST00000411292 86 ntBASIC1□□□□□ -2.25
PHACTR1Q9C0D0 RPS29P1-201ENST00000465274 159 ntBASIC1□□□□□ -2.25
PHACTR1Q9C0D0 U7.6-201ENST00000610841 64 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 176.8 ms