Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 AL162376.1-201ENST00000624117 175 ntBASIC0.69□□□□□ -2.3
TIMP4Q99727 MIR6866-201ENST00000638146 69 ntBASIC0.69□□□□□ -2.3
TIMP4Q99727 Y_RNA.565-201ENST00000384719 101 ntBASIC0.68□□□□□ -2.3
TIMP4Q99727 MT-TY-201ENST00000387409 66 ntBASIC0.68□□□□□ -2.3
TIMP4Q99727 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.68□□□□□ -2.3
TIMP4Q99727 RNU6-274P-201ENST00000459566 107 ntBASIC0.68□□□□□ -2.3
TIMP4Q99727 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.68□□□□□ -2.3
TIMP4Q99727 MIR6515-201ENST00000619843 57 ntBASIC0.68□□□□□ -2.3
TIMP4Q99727 MIR6835-201ENST00000621552 64 ntBASIC0.68□□□□□ -2.3
TIMP4Q99727 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.68□□□□□ -2.3
TIMP4Q99727 RNU6-1296P-201ENST00000383879 107 ntBASIC0.67□□□□□ -2.3
TIMP4Q99727 AC069271.1-201ENST00000445577 156 ntBASIC0.67□□□□□ -2.3
TIMP4Q99727 AL691482.2-201ENST00000457453 84 ntBASIC0.67□□□□□ -2.3
TIMP4Q99727 Y_RNA.36-201ENST00000362602 112 ntBASIC0.66□□□□□ -2.3
TIMP4Q99727 RNU6-495P-201ENST00000362995 107 ntBASIC0.66□□□□□ -2.3
TIMP4Q99727 Y_RNA.681-201ENST00000516445 113 ntBASIC0.66□□□□□ -2.3
TIMP4Q99727 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
TIMP4Q99727 SNORD110-201ENST00000408189 75 ntBASIC0.65□□□□□ -2.31
TIMP4Q99727 SNORD75.2-201ENST00000408784 58 ntBASIC0.65□□□□□ -2.31
TIMP4Q99727 AC006210.1-201ENST00000424882 111 ntBASIC0.65□□□□□ -2.31
TIMP4Q99727 SNORD42B-201ENST00000458893 67 ntBASIC0.65□□□□□ -2.31
TIMP4Q99727 AC018659.1-201ENST00000551083 169 ntBASIC0.65□□□□□ -2.31
TIMP4Q99727 MIR4714-201ENST00000580728 77 ntBASIC0.65□□□□□ -2.31
TIMP4Q99727 MIR3675-201ENST00000583661 73 ntBASIC0.65□□□□□ -2.31
TIMP4Q99727 RNU6-110P-201ENST00000384508 104 ntBASIC0.64□□□□□ -2.31
TIMP4Q99727 MIR203A-201ENST00000384836 110 ntBASIC0.64□□□□□ -2.31
TIMP4Q99727 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
TIMP4Q99727 RNA5SP436-201ENST00000516020 115 ntBASIC0.64□□□□□ -2.31
TIMP4Q99727 SNORA70.25-201ENST00000612741 95 ntBASIC0.64□□□□□ -2.31
TIMP4Q99727 RNU6-411P-201ENST00000384451 107 ntBASIC0.63□□□□□ -2.31
TIMP4Q99727 Y_RNA.545-201ENST00000384652 105 ntBASIC0.63□□□□□ -2.31
TIMP4Q99727 MIR508-201ENST00000384857 115 ntBASIC0.63□□□□□ -2.31
TIMP4Q99727 RNU4-54P-201ENST00000516428 129 ntBASIC0.63□□□□□ -2.31
TIMP4Q99727 MIR4473-201ENST00000583731 91 ntBASIC0.63□□□□□ -2.31
TIMP4Q99727 AL590095.2-201ENST00000604136 117 ntBASIC0.63□□□□□ -2.31
TIMP4Q99727 AC069503.3-201ENST00000618674 145 ntBASIC0.63□□□□□ -2.31
TIMP4Q99727 AC073869.9-201ENST00000641610 120 ntBASIC0.63□□□□□ -2.31
TIMP4Q99727 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
TIMP4Q99727 SNORA40.8-201ENST00000411034 126 ntBASIC0.62□□□□□ -2.31
TIMP4Q99727 MIR6509-201ENST00000614603 85 ntBASIC0.62□□□□□ -2.31
TIMP4Q99727 SNORD45.1-201ENST00000363181 77 ntBASIC0.61□□□□□ -2.31
TIMP4Q99727 SNORD118-201ENST00000363593 134 ntBASIC0.61□□□□□ -2.31
TIMP4Q99727 RNU6-1039P-201ENST00000383931 107 ntBASIC0.61□□□□□ -2.31
TIMP4Q99727 Y_RNA.423-201ENST00000384057 113 ntBASIC0.61□□□□□ -2.31
TIMP4Q99727 SNORD71-201ENST00000411292 86 ntBASIC0.61□□□□□ -2.31
TIMP4Q99727 RNU7-24P-201ENST00000458867 62 ntBASIC0.61□□□□□ -2.31
TIMP4Q99727 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.61□□□□□ -2.31
TIMP4Q99727 MIR598-201ENST00000384868 97 ntBASIC0.6□□□□□ -2.31
TIMP4Q99727 RNU6-1015P-201ENST00000517121 99 ntBASIC0.6□□□□□ -2.31
TIMP4Q99727 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
TIMP4Q99727 RNU6-1241P-201ENST00000384536 107 ntBASIC0.59□□□□□ -2.31
TIMP4Q99727 MIR518A1-201ENST00000385068 85 ntBASIC0.59□□□□□ -2.31
TIMP4Q99727 MIR154-201ENST00000385243 84 ntBASIC0.59□□□□□ -2.31
TIMP4Q99727 RNU6-523P-201ENST00000516304 54 ntBASIC0.59□□□□□ -2.31
TIMP4Q99727 RNU6-990P-201ENST00000364385 104 ntBASIC0.58□□□□□ -2.32
TIMP4Q99727 RNU6-587P-201ENST00000391282 106 ntBASIC0.58□□□□□ -2.32
TIMP4Q99727 RNU6-752P-201ENST00000516376 102 ntBASIC0.58□□□□□ -2.32
TIMP4Q99727 RNU6-687P-201ENST00000516443 89 ntBASIC0.58□□□□□ -2.32
TIMP4Q99727 RNU6-229P-201ENST00000516614 102 ntBASIC0.58□□□□□ -2.32
TIMP4Q99727 PVT1_3.1-201ENST00000620853 95 ntBASIC0.58□□□□□ -2.32
TIMP4Q99727 Y_RNA.407-201ENST00000383986 113 ntBASIC0.57□□□□□ -2.32
TIMP4Q99727 RNU6-260P-201ENST00000384092 107 ntBASIC0.57□□□□□ -2.32
TIMP4Q99727 MIR652-201ENST00000385278 98 ntBASIC0.57□□□□□ -2.32
TIMP4Q99727 RNA5SP147-201ENST00000516493 109 ntBASIC0.57□□□□□ -2.32
TIMP4Q99727 MIR548AE1-201ENST00000583292 70 ntBASIC0.57□□□□□ -2.32
TIMP4Q99727 SNORA2A-201ENST00000383885 135 ntBASIC0.56□□□□□ -2.32
TIMP4Q99727 RNU6-604P-201ENST00000390917 100 ntBASIC0.56□□□□□ -2.32
TIMP4Q99727 RNU1-29P-201ENST00000606574 126 ntBASIC0.56□□□□□ -2.32
TIMP4Q99727 MIR6513-201ENST00000621188 64 ntBASIC0.56□□□□□ -2.32
TIMP4Q99727 SNORD114-4-201ENST00000363962 75 ntBASIC0.55□□□□□ -2.32
TIMP4Q99727 RNU6-945P-201ENST00000383947 107 ntBASIC0.55□□□□□ -2.32
TIMP4Q99727 HMGN2P22-201ENST00000427588 175 ntBASIC0.55□□□□□ -2.32
TIMP4Q99727 RNU6-1232P-201ENST00000516299 86 ntBASIC0.55□□□□□ -2.32
TIMP4Q99727 MIR5706-201ENST00000579841 80 ntBASIC0.55□□□□□ -2.32
TIMP4Q99727 MIR3657-201ENST00000584818 117 ntBASIC0.55□□□□□ -2.32
TIMP4Q99727 uc_338.10-201ENST00000621872 182 ntBASIC0.55□□□□□ -2.32
TIMP4Q99727 SNORD45A-201ENST00000384512 84 ntBASIC0.54□□□□□ -2.32
TIMP4Q99727 AC098934.3-201ENST00000430450 190 ntBASIC0.54□□□□□ -2.32
TIMP4Q99727 SNORD115-31-201ENST00000365318 82 ntBASIC0.53□□□□□ -2.32
TIMP4Q99727 AC073261.1-201ENST00000429409 121 ntBASIC0.53□□□□□ -2.32
TIMP4Q99727 snoU13.13-201ENST00000458842 104 ntBASIC0.53□□□□□ -2.32
TIMP4Q99727 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.52□□□□□ -2.33
TIMP4Q99727 RNA5SP347-201ENST00000362445 119 ntBASIC0.52□□□□□ -2.33
TIMP4Q99727 SNORD115-22-201ENST00000364456 82 ntBASIC0.52□□□□□ -2.33
TIMP4Q99727 MIR936-201ENST00000401264 98 ntBASIC0.52□□□□□ -2.33
TIMP4Q99727 RNU6-871P-201ENST00000516122 100 ntBASIC0.52□□□□□ -2.33
TIMP4Q99727 uc_338.17-201ENST00000619633 179 ntBASIC0.52□□□□□ -2.33
TIMP4Q99727 MIR6755-201ENST00000619993 66 ntBASIC0.52□□□□□ -2.33
TIMP4Q99727 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.52□□□□□ -2.33
TIMP4Q99727 RNU6-895P-201ENST00000384125 103 ntBASIC0.51□□□□□ -2.33
TIMP4Q99727 Y_RNA.540-201ENST00000384638 111 ntBASIC0.51□□□□□ -2.33
TIMP4Q99727 MIR760-201ENST00000390220 80 ntBASIC0.51□□□□□ -2.33
TIMP4Q99727 RNU6-634P-201ENST00000459134 106 ntBASIC0.51□□□□□ -2.33
TIMP4Q99727 RNU7-129P-201ENST00000516128 62 ntBASIC0.51□□□□□ -2.33
TIMP4Q99727 SCARNA17.3-201ENST00000516381 125 ntBASIC0.51□□□□□ -2.33
TIMP4Q99727 MIR8053-201ENST00000613344 75 ntBASIC0.51□□□□□ -2.33
TIMP4Q99727 Y_RNA.125-201ENST00000363371 111 ntBASIC0.5□□□□□ -2.33
TIMP4Q99727 RNA5SP499-201ENST00000363982 119 ntBASIC0.5□□□□□ -2.33
TIMP4Q99727 MIR92A1-201ENST00000385233 78 ntBASIC0.5□□□□□ -2.33
TIMP4Q99727 SNORD44.1-201ENST00000363202 61 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 185.1 ms