Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 RNU6-274P-201ENST00000459566 107 ntBASIC0.56□□□□□ -2.32
FOXRED1Q96CU9 RNU6-303P-201ENST00000517091 106 ntBASIC0.56□□□□□ -2.32
FOXRED1Q96CU9 MIR6734-201ENST00000621166 68 ntBASIC0.56□□□□□ -2.32
FOXRED1Q96CU9 MIR4773-1-201ENST00000637203 78 ntBASIC0.56□□□□□ -2.32
FOXRED1Q96CU9 RNU6-495P-201ENST00000362995 107 ntBASIC0.55□□□□□ -2.32
FOXRED1Q96CU9 RNU6-824P-201ENST00000363724 104 ntBASIC0.55□□□□□ -2.32
FOXRED1Q96CU9 RNU6-54P-201ENST00000365563 107 ntBASIC0.55□□□□□ -2.32
FOXRED1Q96CU9 MIR5000-201ENST00000577717 103 ntBASIC0.55□□□□□ -2.32
FOXRED1Q96CU9 uc_338.17-201ENST00000619633 179 ntBASIC0.55□□□□□ -2.32
FOXRED1Q96CU9 Y_RNA.94-201ENST00000363068 106 ntBASIC0.54□□□□□ -2.32
FOXRED1Q96CU9 Y_RNA.407-201ENST00000383986 113 ntBASIC0.54□□□□□ -2.32
FOXRED1Q96CU9 SNORD44.1-201ENST00000363202 61 ntBASIC0.53□□□□□ -2.32
FOXRED1Q96CU9 RNU6-382P-201ENST00000365181 106 ntBASIC0.53□□□□□ -2.32
FOXRED1Q96CU9 MIR92A1-201ENST00000385233 78 ntBASIC0.53□□□□□ -2.32
FOXRED1Q96CU9 RNU6-279P-201ENST00000391297 101 ntBASIC0.53□□□□□ -2.32
FOXRED1Q96CU9 MIR4473-201ENST00000583731 91 ntBASIC0.53□□□□□ -2.32
FOXRED1Q96CU9 uc_338.10-201ENST00000621872 182 ntBASIC0.53□□□□□ -2.32
FOXRED1Q96CU9 RNU6-24P-201ENST00000384440 107 ntBASIC0.52□□□□□ -2.33
FOXRED1Q96CU9 snoU13.18-201ENST00000459483 104 ntBASIC0.52□□□□□ -2.33
FOXRED1Q96CU9 SNORA68.3-201ENST00000515906 83 ntBASIC0.52□□□□□ -2.33
FOXRED1Q96CU9 RNU1-29P-201ENST00000606574 126 ntBASIC0.52□□□□□ -2.33
FOXRED1Q96CU9 MIR760-201ENST00000390220 80 ntBASIC0.51□□□□□ -2.33
FOXRED1Q96CU9 RNU6-752P-201ENST00000516376 102 ntBASIC0.51□□□□□ -2.33
FOXRED1Q96CU9 MIR4714-201ENST00000580728 77 ntBASIC0.51□□□□□ -2.33
FOXRED1Q96CU9 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
FOXRED1Q96CU9 Y_RNA.125-201ENST00000363371 111 ntBASIC0.5□□□□□ -2.33
FOXRED1Q96CU9 Y_RNA.258-201ENST00000364613 105 ntBASIC0.5□□□□□ -2.33
FOXRED1Q96CU9 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.5□□□□□ -2.33
FOXRED1Q96CU9 AL691482.2-201ENST00000457453 84 ntBASIC0.5□□□□□ -2.33
FOXRED1Q96CU9 RNU6-857P-201ENST00000515893 110 ntBASIC0.5□□□□□ -2.33
FOXRED1Q96CU9 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.5□□□□□ -2.33
FOXRED1Q96CU9 MIR6755-201ENST00000619993 66 ntBASIC0.5□□□□□ -2.33
FOXRED1Q96CU9 MIRLET7D-201ENST00000362263 87 ntBASIC0.49□□□□□ -2.33
FOXRED1Q96CU9 RNU6-1275P-201ENST00000391087 107 ntBASIC0.49□□□□□ -2.33
FOXRED1Q96CU9 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.49□□□□□ -2.33
FOXRED1Q96CU9 RNA5SP347-201ENST00000362445 119 ntBASIC0.48□□□□□ -2.33
FOXRED1Q96CU9 RNA5SP128-201ENST00000365305 116 ntBASIC0.48□□□□□ -2.33
FOXRED1Q96CU9 MIR216A-201ENST00000385063 110 ntBASIC0.48□□□□□ -2.33
FOXRED1Q96CU9 RNA5SP225-201ENST00000410874 135 ntBASIC0.48□□□□□ -2.33
FOXRED1Q96CU9 AC074348.1-201ENST00000426503 132 ntBASIC0.48□□□□□ -2.33
FOXRED1Q96CU9 HMGN2P22-201ENST00000427588 175 ntBASIC0.48□□□□□ -2.33
FOXRED1Q96CU9 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
FOXRED1Q96CU9 AC090625.1-201ENST00000357130 210 ntBASIC0.47□□□□□ -2.33
FOXRED1Q96CU9 SNORD42B-201ENST00000458893 67 ntBASIC0.47□□□□□ -2.33
FOXRED1Q96CU9 SNORA9.1-201ENST00000362412 131 ntBASIC0.46□□□□□ -2.34
FOXRED1Q96CU9 Y_RNA.36-201ENST00000362602 112 ntBASIC0.46□□□□□ -2.34
FOXRED1Q96CU9 AL157398.1-201ENST00000452981 186 ntBASIC0.46□□□□□ -2.34
FOXRED1Q96CU9 RNU7-129P-201ENST00000516128 62 ntBASIC0.46□□□□□ -2.34
FOXRED1Q96CU9 AC022709.1-201ENST00000615967 87 ntBASIC0.46□□□□□ -2.34
FOXRED1Q96CU9 MIR103A1-201ENST00000362165 78 ntBASIC0.45□□□□□ -2.34
FOXRED1Q96CU9 RNU6-1039P-201ENST00000383931 107 ntBASIC0.45□□□□□ -2.34
FOXRED1Q96CU9 RNA5SP395-201ENST00000516567 118 ntBASIC0.45□□□□□ -2.34
FOXRED1Q96CU9 MIR4484-201ENST00000582855 83 ntBASIC0.45□□□□□ -2.34
FOXRED1Q96CU9 MIR6509-201ENST00000614603 85 ntBASIC0.45□□□□□ -2.34
FOXRED1Q96CU9 Y_RNA.355-201ENST00000365462 98 ntBASIC0.44□□□□□ -2.34
FOXRED1Q96CU9 RNU6-154P-201ENST00000384306 106 ntBASIC0.44□□□□□ -2.34
FOXRED1Q96CU9 SCARNA17.3-201ENST00000516381 125 ntBASIC0.44□□□□□ -2.34
FOXRED1Q96CU9 MIR548AE1-201ENST00000583292 70 ntBASIC0.44□□□□□ -2.34
FOXRED1Q96CU9 U7.4-201ENST00000614961 63 ntBASIC0.44□□□□□ -2.34
FOXRED1Q96CU9 MIR6513-201ENST00000621188 64 ntBASIC0.44□□□□□ -2.34
FOXRED1Q96CU9 RNA5SP62-201ENST00000363457 110 ntBASIC0.43□□□□□ -2.34
FOXRED1Q96CU9 SNORA8.1-201ENST00000384250 140 ntBASIC0.43□□□□□ -2.34
FOXRED1Q96CU9 MIR652-201ENST00000385278 98 ntBASIC0.43□□□□□ -2.34
FOXRED1Q96CU9 MIR501-201ENST00000390204 84 ntBASIC0.43□□□□□ -2.34
FOXRED1Q96CU9 AC073261.1-201ENST00000429409 121 ntBASIC0.43□□□□□ -2.34
FOXRED1Q96CU9 RNU6-1232P-201ENST00000516299 86 ntBASIC0.43□□□□□ -2.34
FOXRED1Q96CU9 MIR3675-201ENST00000583661 73 ntBASIC0.43□□□□□ -2.34
FOXRED1Q96CU9 MIR4677-201ENST00000584153 80 ntBASIC0.43□□□□□ -2.34
FOXRED1Q96CU9 MIR548AD-201ENST00000584780 82 ntBASIC0.43□□□□□ -2.34
FOXRED1Q96CU9 MIR5087-201ENST00000635826 76 ntBASIC0.43□□□□□ -2.34
FOXRED1Q96CU9 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.42□□□□□ -2.34
FOXRED1Q96CU9 RNA5SP499-201ENST00000363982 119 ntBASIC0.42□□□□□ -2.34
FOXRED1Q96CU9 Y_RNA.532-201ENST00000384590 113 ntBASIC0.42□□□□□ -2.34
FOXRED1Q96CU9 MIR516B1-201ENST00000385211 90 ntBASIC0.42□□□□□ -2.34
FOXRED1Q96CU9 MIR6515-201ENST00000619843 57 ntBASIC0.42□□□□□ -2.34
FOXRED1Q96CU9 Y_RNA.118-201ENST00000363300 101 ntBASIC0.41□□□□□ -2.34
FOXRED1Q96CU9 SNORD114-29-201ENST00000364819 70 ntBASIC0.41□□□□□ -2.34
FOXRED1Q96CU9 RNU6-1327P-201ENST00000365302 105 ntBASIC0.41□□□□□ -2.34
FOXRED1Q96CU9 RNU6-260P-201ENST00000384092 107 ntBASIC0.41□□□□□ -2.34
FOXRED1Q96CU9 Y_RNA.681-201ENST00000516445 113 ntBASIC0.41□□□□□ -2.34
FOXRED1Q96CU9 AC084368.1-201ENST00000620935 65 ntBASIC0.41□□□□□ -2.34
FOXRED1Q96CU9 MIR499B-201ENST00000636498 73 ntBASIC0.41□□□□□ -2.34
FOXRED1Q96CU9 MIR20A-201ENST00000362279 71 ntBASIC0.4□□□□□ -2.35
FOXRED1Q96CU9 MIR7-2-201ENST00000384970 110 ntBASIC0.4□□□□□ -2.35
FOXRED1Q96CU9 AC114737.2-201ENST00000421583 173 ntBASIC0.4□□□□□ -2.35
FOXRED1Q96CU9 RNU6-638P-201ENST00000516582 104 ntBASIC0.4□□□□□ -2.35
FOXRED1Q96CU9 AC145423.2-201ENST00000610631 239 ntBASIC0.4□□□□□ -2.35
FOXRED1Q96CU9 MIR4662A-201ENST00000637499 67 ntBASIC0.4□□□□□ -2.35
FOXRED1Q96CU9 SNORA50A-201ENST00000384225 134 ntBASIC0.39□□□□□ -2.35
FOXRED1Q96CU9 MIR598-201ENST00000384868 97 ntBASIC0.39□□□□□ -2.35
FOXRED1Q96CU9 AC244090.1-201ENST00000441884 93 ntBASIC0.39□□□□□ -2.35
FOXRED1Q96CU9 AC243829.3-201ENST00000622177 108 ntBASIC0.39□□□□□ -2.35
FOXRED1Q96CU9 Y_RNA.244-201ENST00000364484 109 ntBASIC0.38□□□□□ -2.35
FOXRED1Q96CU9 RNU6-815P-201ENST00000384080 113 ntBASIC0.38□□□□□ -2.35
FOXRED1Q96CU9 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
FOXRED1Q96CU9 SCARNA18B-201ENST00000458806 135 ntBASIC0.38□□□□□ -2.35
FOXRED1Q96CU9 AC069113.3-201ENST00000521019 150 ntBASIC0.38□□□□□ -2.35
FOXRED1Q96CU9 MIR203A-201ENST00000384836 110 ntBASIC0.37□□□□□ -2.35
FOXRED1Q96CU9 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
FOXRED1Q96CU9 RNU6-330P-201ENST00000363015 107 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 190 ms