Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 MIR4460-201ENST00000577862 86 ntBASIC1.37□□□□□ -2.19
TMEM40Q8WWA1 RNU6-1312P-201ENST00000362425 108 ntBASIC1.36□□□□□ -2.19
TMEM40Q8WWA1 SNORD28-201ENST00000384706 75 ntBASIC1.36□□□□□ -2.19
TMEM40Q8WWA1 MIR758-201ENST00000390227 88 ntBASIC1.36□□□□□ -2.19
TMEM40Q8WWA1 RNU6-808P-201ENST00000391233 108 ntBASIC1.36□□□□□ -2.19
TMEM40Q8WWA1 RNU6-955P-201ENST00000410497 104 ntBASIC1.36□□□□□ -2.19
TMEM40Q8WWA1 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.36□□□□□ -2.19
TMEM40Q8WWA1 RNA5SP404-201ENST00000517118 132 ntBASIC1.36□□□□□ -2.19
TMEM40Q8WWA1 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.36□□□□□ -2.19
TMEM40Q8WWA1 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
TMEM40Q8WWA1 Y_RNA.224-201ENST00000364308 111 ntBASIC1.35□□□□□ -2.19
TMEM40Q8WWA1 Y_RNA.355-201ENST00000365462 98 ntBASIC1.35□□□□□ -2.19
TMEM40Q8WWA1 RNU6-716P-201ENST00000365621 103 ntBASIC1.35□□□□□ -2.19
TMEM40Q8WWA1 RNU6-1184P-201ENST00000384588 108 ntBASIC1.35□□□□□ -2.19
TMEM40Q8WWA1 SNORD105-201ENST00000386910 85 ntBASIC1.35□□□□□ -2.19
TMEM40Q8WWA1 SNORD41.1-201ENST00000391000 69 ntBASIC1.35□□□□□ -2.19
TMEM40Q8WWA1 MIR548L-201ENST00000408303 86 ntBASIC1.35□□□□□ -2.19
TMEM40Q8WWA1 AC018659.1-201ENST00000551083 169 ntBASIC1.35□□□□□ -2.19
TMEM40Q8WWA1 MIR7111-201ENST00000619751 72 ntBASIC1.35□□□□□ -2.19
TMEM40Q8WWA1 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
TMEM40Q8WWA1 RNU1-124P-201ENST00000363861 145 ntBASIC1.34□□□□□ -2.19
TMEM40Q8WWA1 MIR150-201ENST00000385048 84 ntBASIC1.34□□□□□ -2.19
TMEM40Q8WWA1 RNU1-141P-201ENST00000364623 158 ntBASIC1.33□□□□□ -2.2
TMEM40Q8WWA1 SNORD114-24-201ENST00000365029 72 ntBASIC1.33□□□□□ -2.2
TMEM40Q8WWA1 RNU6-302P-201ENST00000365249 107 ntBASIC1.33□□□□□ -2.2
TMEM40Q8WWA1 SNORD114-22-201ENST00000365423 72 ntBASIC1.33□□□□□ -2.2
TMEM40Q8WWA1 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
TMEM40Q8WWA1 SNORD114-27-201ENST00000363766 70 ntBASIC1.32□□□□□ -2.2
TMEM40Q8WWA1 RNU6-726P-201ENST00000364680 107 ntBASIC1.32□□□□□ -2.2
TMEM40Q8WWA1 RNU6-1162P-201ENST00000384443 104 ntBASIC1.32□□□□□ -2.2
TMEM40Q8WWA1 MIR521-2-201ENST00000384818 87 ntBASIC1.32□□□□□ -2.2
TMEM40Q8WWA1 RNU6-269P-201ENST00000391077 97 ntBASIC1.32□□□□□ -2.2
TMEM40Q8WWA1 RNU7-74P-201ENST00000459104 62 ntBASIC1.32□□□□□ -2.2
TMEM40Q8WWA1 MIR548AD-201ENST00000584780 82 ntBASIC1.32□□□□□ -2.2
TMEM40Q8WWA1 MIR4639-201ENST00000584938 69 ntBASIC1.32□□□□□ -2.2
TMEM40Q8WWA1 RNU6-939P-201ENST00000384634 107 ntBASIC1.31□□□□□ -2.2
TMEM40Q8WWA1 MIR618-201ENST00000385287 98 ntBASIC1.31□□□□□ -2.2
TMEM40Q8WWA1 MIR4452-201ENST00000583004 71 ntBASIC1.31□□□□□ -2.2
TMEM40Q8WWA1 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.31□□□□□ -2.2
TMEM40Q8WWA1 MIR6767-201ENST00000637302 66 ntBASIC1.31□□□□□ -2.2
TMEM40Q8WWA1 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
TMEM40Q8WWA1 RNA5SP484-201ENST00000458857 111 ntBASIC1.3□□□□□ -2.2
TMEM40Q8WWA1 U2.7-201ENST00000619197 100 ntBASIC1.3□□□□□ -2.2
TMEM40Q8WWA1 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
TMEM40Q8WWA1 SNORD18A-201ENST00000363753 72 ntBASIC1.29□□□□□ -2.2
TMEM40Q8WWA1 RNU1-93P-201ENST00000364704 169 ntBASIC1.29□□□□□ -2.2
TMEM40Q8WWA1 MIR517B-201ENST00000385102 67 ntBASIC1.29□□□□□ -2.2
TMEM40Q8WWA1 RNU6-469P-201ENST00000516253 101 ntBASIC1.29□□□□□ -2.2
TMEM40Q8WWA1 RNA5SP47-201ENST00000517230 109 ntBASIC1.29□□□□□ -2.2
TMEM40Q8WWA1 AC025627.3-201ENST00000582078 182 ntBASIC1.29□□□□□ -2.2
TMEM40Q8WWA1 U4.4-201ENST00000620626 117 ntBASIC1.29□□□□□ -2.2
TMEM40Q8WWA1 SNORA33.1-201ENST00000364957 130 ntBASIC1.28□□□□□ -2.2
TMEM40Q8WWA1 RNU7-174P-201ENST00000516248 59 ntBASIC1.28□□□□□ -2.2
TMEM40Q8WWA1 MIR3678-201ENST00000578455 94 ntBASIC1.28□□□□□ -2.2
TMEM40Q8WWA1 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
TMEM40Q8WWA1 RNU4-88P-201ENST00000411220 86 ntBASIC1.27□□□□□ -2.21
TMEM40Q8WWA1 AC021146.9-201ENST00000512503 156 ntBASIC1.27□□□□□ -2.21
TMEM40Q8WWA1 RNA5SP255-201ENST00000516370 107 ntBASIC1.27□□□□□ -2.21
TMEM40Q8WWA1 Y_RNA.118-201ENST00000363300 101 ntBASIC1.26□□□□□ -2.21
TMEM40Q8WWA1 SNORD114-4-201ENST00000363962 75 ntBASIC1.26□□□□□ -2.21
TMEM40Q8WWA1 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC1.26□□□□□ -2.21
TMEM40Q8WWA1 Y_RNA.125-201ENST00000363371 111 ntBASIC1.25□□□□□ -2.21
TMEM40Q8WWA1 RNU6-698P-201ENST00000363523 107 ntBASIC1.25□□□□□ -2.21
TMEM40Q8WWA1 Y_RNA.250-201ENST00000364542 110 ntBASIC1.25□□□□□ -2.21
TMEM40Q8WWA1 RNU6-34P-201ENST00000364874 107 ntBASIC1.25□□□□□ -2.21
TMEM40Q8WWA1 MIR573-201ENST00000384964 99 ntBASIC1.25□□□□□ -2.21
TMEM40Q8WWA1 MIR652-201ENST00000385278 98 ntBASIC1.25□□□□□ -2.21
TMEM40Q8WWA1 SNORD113-2-201ENST00000391082 72 ntBASIC1.25□□□□□ -2.21
TMEM40Q8WWA1 Y_RNA.633-201ENST00000459107 95 ntBASIC1.25□□□□□ -2.21
TMEM40Q8WWA1 RNU6-135P-201ENST00000516769 101 ntBASIC1.25□□□□□ -2.21
TMEM40Q8WWA1 MIR7974-201ENST00000615835 79 ntBASIC1.25□□□□□ -2.21
TMEM40Q8WWA1 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.25□□□□□ -2.21
TMEM40Q8WWA1 SNORA8.2-201ENST00000384372 139 ntBASIC1.24□□□□□ -2.21
TMEM40Q8WWA1 SNORA41B-201ENST00000384785 128 ntBASIC1.24□□□□□ -2.21
TMEM40Q8WWA1 MIR489-201ENST00000384923 84 ntBASIC1.24□□□□□ -2.21
TMEM40Q8WWA1 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.24□□□□□ -2.21
TMEM40Q8WWA1 Y_RNA.325-201ENST00000365171 122 ntBASIC1.23□□□□□ -2.21
TMEM40Q8WWA1 MIR582-201ENST00000365731 98 ntBASIC1.23□□□□□ -2.21
TMEM40Q8WWA1 MIR3612-201ENST00000579753 87 ntBASIC1.23□□□□□ -2.21
TMEM40Q8WWA1 MIR548AE1-201ENST00000583292 70 ntBASIC1.23□□□□□ -2.21
TMEM40Q8WWA1 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.22□□□□□ -2.21
TMEM40Q8WWA1 MIR520E-201ENST00000384867 87 ntBASIC1.22□□□□□ -2.21
TMEM40Q8WWA1 RNU6-1246P-201ENST00000391064 107 ntBASIC1.22□□□□□ -2.21
TMEM40Q8WWA1 MIR4295-201ENST00000585286 85 ntBASIC1.22□□□□□ -2.21
TMEM40Q8WWA1 SNORA9.1-201ENST00000362412 131 ntBASIC1.21□□□□□ -2.22
TMEM40Q8WWA1 MIR4473-201ENST00000583731 91 ntBASIC1.21□□□□□ -2.22
TMEM40Q8WWA1 RNU6-753P-201ENST00000363926 107 ntBASIC1.2□□□□□ -2.22
TMEM40Q8WWA1 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
TMEM40Q8WWA1 SNORA15B-2-201ENST00000384058 135 ntBASIC1.2□□□□□ -2.22
TMEM40Q8WWA1 SNORA15B-1-201ENST00000384334 135 ntBASIC1.2□□□□□ -2.22
TMEM40Q8WWA1 SNORD99-201ENST00000408612 74 ntBASIC1.2□□□□□ -2.22
TMEM40Q8WWA1 AC087343.1-201ENST00000477341 475 ntBASIC1.2□□□□□ -2.22
TMEM40Q8WWA1 SCARNA17.3-201ENST00000516381 125 ntBASIC1.2□□□□□ -2.22
TMEM40Q8WWA1 SCARNA16.5-201ENST00000517114 183 ntBASIC1.2□□□□□ -2.22
TMEM40Q8WWA1 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.2□□□□□ -2.22
TMEM40Q8WWA1 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.2□□□□□ -2.22
TMEM40Q8WWA1 Y_RNA.246-201ENST00000364495 108 ntBASIC1.19□□□□□ -2.22
TMEM40Q8WWA1 SNORA63.6-201ENST00000364921 119 ntBASIC1.19□□□□□ -2.22
TMEM40Q8WWA1 MIR548E-201ENST00000408287 88 ntBASIC1.19□□□□□ -2.22
TMEM40Q8WWA1 AL162376.1-201ENST00000624117 175 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 197.5 ms