Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.99□□□□□ -2.25
NUP43Q8NFH3 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
NUP43Q8NFH3 SNORD115-22-201ENST00000364456 82 ntBASIC0.98□□□□□ -2.25
NUP43Q8NFH3 RNA5SP222-201ENST00000411039 105 ntBASIC0.98□□□□□ -2.25
NUP43Q8NFH3 AC087343.1-201ENST00000477341 475 ntBASIC0.98□□□□□ -2.25
NUP43Q8NFH3 RNA5SP268-201ENST00000516828 124 ntBASIC0.98□□□□□ -2.25
NUP43Q8NFH3 SNORD114-21-201ENST00000606412 72 ntBASIC0.98□□□□□ -2.25
NUP43Q8NFH3 MIR7107-201ENST00000611489 80 ntBASIC0.98□□□□□ -2.25
NUP43Q8NFH3 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.97□□□□□ -2.25
NUP43Q8NFH3 SNORD114-27-201ENST00000363766 70 ntBASIC0.97□□□□□ -2.25
NUP43Q8NFH3 SNORD45A-201ENST00000384512 84 ntBASIC0.97□□□□□ -2.25
NUP43Q8NFH3 RNU6-604P-201ENST00000390917 100 ntBASIC0.97□□□□□ -2.25
NUP43Q8NFH3 MIR4661-201ENST00000582720 75 ntBASIC0.97□□□□□ -2.25
NUP43Q8NFH3 Y_RNA.374-201ENST00000365606 101 ntBASIC0.96□□□□□ -2.26
NUP43Q8NFH3 RNY1P8-201ENST00000383970 114 ntBASIC0.96□□□□□ -2.26
NUP43Q8NFH3 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.96□□□□□ -2.26
NUP43Q8NFH3 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.96□□□□□ -2.26
NUP43Q8NFH3 MIR8053-201ENST00000613344 75 ntBASIC0.96□□□□□ -2.26
NUP43Q8NFH3 MIR6509-201ENST00000614603 85 ntBASIC0.96□□□□□ -2.26
NUP43Q8NFH3 MIR6767-201ENST00000637302 66 ntBASIC0.96□□□□□ -2.26
NUP43Q8NFH3 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
NUP43Q8NFH3 RNU6-590P-201ENST00000365039 107 ntBASIC0.95□□□□□ -2.26
NUP43Q8NFH3 RNU6-649P-201ENST00000384463 107 ntBASIC0.95□□□□□ -2.26
NUP43Q8NFH3 AC069503.3-201ENST00000618674 145 ntBASIC0.95□□□□□ -2.26
NUP43Q8NFH3 MIR203A-201ENST00000384836 110 ntBASIC0.94□□□□□ -2.26
NUP43Q8NFH3 SNORD30.1-201ENST00000391309 70 ntBASIC0.94□□□□□ -2.26
NUP43Q8NFH3 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.94□□□□□ -2.26
NUP43Q8NFH3 RNU5B-6P-201ENST00000516765 68 ntBASIC0.94□□□□□ -2.26
NUP43Q8NFH3 RNU6-881P-201ENST00000516813 102 ntBASIC0.94□□□□□ -2.26
NUP43Q8NFH3 RN7SL793P-201ENST00000583259 296 ntBASIC0.94□□□□□ -2.26
NUP43Q8NFH3 RNU6-663P-201ENST00000391105 106 ntBASIC0.93□□□□□ -2.26
NUP43Q8NFH3 SNORA40.17-201ENST00000517256 115 ntBASIC0.93□□□□□ -2.26
NUP43Q8NFH3 AC018659.1-201ENST00000551083 169 ntBASIC0.93□□□□□ -2.26
NUP43Q8NFH3 SNORD113.1-201ENST00000363280 73 ntBASIC0.92□□□□□ -2.26
NUP43Q8NFH3 RNU4-38P-201ENST00000364472 129 ntBASIC0.92□□□□□ -2.26
NUP43Q8NFH3 MIR5000-201ENST00000577717 103 ntBASIC0.92□□□□□ -2.26
NUP43Q8NFH3 MIR3657-201ENST00000584818 117 ntBASIC0.92□□□□□ -2.26
NUP43Q8NFH3 AC073869.9-201ENST00000641610 120 ntBASIC0.92□□□□□ -2.26
NUP43Q8NFH3 Y_RNA.386-201ENST00000383913 105 ntBASIC0.91□□□□□ -2.26
NUP43Q8NFH3 MIR608-201ENST00000384820 100 ntBASIC0.91□□□□□ -2.26
NUP43Q8NFH3 AC103810.9-201ENST00000606688 112 ntBASIC0.91□□□□□ -2.26
NUP43Q8NFH3 U6.111-201ENST00000636093 83 ntBASIC0.91□□□□□ -2.26
NUP43Q8NFH3 RNU6-990P-201ENST00000364385 104 ntBASIC0.9□□□□□ -2.27
NUP43Q8NFH3 RNA5SP517-201ENST00000364724 117 ntBASIC0.9□□□□□ -2.27
NUP43Q8NFH3 SNORA36.2-201ENST00000384004 127 ntBASIC0.9□□□□□ -2.27
NUP43Q8NFH3 RNU6-260P-201ENST00000384092 107 ntBASIC0.9□□□□□ -2.27
NUP43Q8NFH3 MIR216A-201ENST00000385063 110 ntBASIC0.9□□□□□ -2.27
NUP43Q8NFH3 RNU6-895P-201ENST00000384125 103 ntBASIC0.89□□□□□ -2.27
NUP43Q8NFH3 SNORD116-24-201ENST00000384549 92 ntBASIC0.89□□□□□ -2.27
NUP43Q8NFH3 MIR140-201ENST00000385282 100 ntBASIC0.89□□□□□ -2.27
NUP43Q8NFH3 ACA64.5-201ENST00000516207 127 ntBASIC0.89□□□□□ -2.27
NUP43Q8NFH3 AC211469.2-201ENST00000605461 205 ntBASIC0.89□□□□□ -2.27
NUP43Q8NFH3 SNORA2.1-201ENST00000363089 137 ntBASIC0.88□□□□□ -2.27
NUP43Q8NFH3 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
NUP43Q8NFH3 AC006210.1-201ENST00000424882 111 ntBASIC0.88□□□□□ -2.27
NUP43Q8NFH3 RNU6-982P-201ENST00000516216 102 ntBASIC0.88□□□□□ -2.27
NUP43Q8NFH3 RNU1-29P-201ENST00000606574 126 ntBASIC0.88□□□□□ -2.27
NUP43Q8NFH3 SNORA70.25-201ENST00000612741 95 ntBASIC0.88□□□□□ -2.27
NUP43Q8NFH3 RNU6-800P-201ENST00000384473 103 ntBASIC0.87□□□□□ -2.27
NUP43Q8NFH3 MIR4752-201ENST00000579672 72 ntBASIC0.87□□□□□ -2.27
NUP43Q8NFH3 MIR6857-201ENST00000613267 93 ntBASIC0.87□□□□□ -2.27
NUP43Q8NFH3 RNU6-1216P-201ENST00000362590 107 ntBASIC0.86□□□□□ -2.27
NUP43Q8NFH3 SNORD110-201ENST00000408189 75 ntBASIC0.86□□□□□ -2.27
NUP43Q8NFH3 MIR548AE1-201ENST00000583292 70 ntBASIC0.86□□□□□ -2.27
NUP43Q8NFH3 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.86□□□□□ -2.27
NUP43Q8NFH3 MIR373-201ENST00000362273 69 ntBASIC0.85□□□□□ -2.27
NUP43Q8NFH3 SNORD114-4-201ENST00000363962 75 ntBASIC0.85□□□□□ -2.27
NUP43Q8NFH3 AC005520.4-201ENST00000604337 90 ntBASIC0.85□□□□□ -2.27
NUP43Q8NFH3 SNORA25.18-201ENST00000607153 114 ntBASIC0.85□□□□□ -2.27
NUP43Q8NFH3 Y_RNA.407-201ENST00000383986 113 ntBASIC0.84□□□□□ -2.27
NUP43Q8NFH3 Y_RNA.443-201ENST00000384135 111 ntBASIC0.84□□□□□ -2.27
NUP43Q8NFH3 MIR1265-201ENST00000408444 86 ntBASIC0.84□□□□□ -2.27
NUP43Q8NFH3 RNA5SP436-201ENST00000516020 115 ntBASIC0.84□□□□□ -2.27
NUP43Q8NFH3 CYP3A137P-201ENST00000562436 69 ntBASIC0.84□□□□□ -2.27
NUP43Q8NFH3 MIR4473-201ENST00000583731 91 ntBASIC0.84□□□□□ -2.27
NUP43Q8NFH3 AC092634.7-201ENST00000621022 103 ntBASIC0.84□□□□□ -2.27
NUP43Q8NFH3 SNORD118-201ENST00000363593 134 ntBASIC0.83□□□□□ -2.28
NUP43Q8NFH3 RNA5SP457-201ENST00000363657 124 ntBASIC0.83□□□□□ -2.28
NUP43Q8NFH3 MIR532-201ENST00000385025 91 ntBASIC0.83□□□□□ -2.28
NUP43Q8NFH3 RNU6-630P-201ENST00000391258 106 ntBASIC0.83□□□□□ -2.28
NUP43Q8NFH3 AC069271.1-201ENST00000445577 156 ntBASIC0.83□□□□□ -2.28
NUP43Q8NFH3 RNA5SP147-201ENST00000516493 109 ntBASIC0.83□□□□□ -2.28
NUP43Q8NFH3 MIR193B-201ENST00000384907 83 ntBASIC0.82□□□□□ -2.28
NUP43Q8NFH3 MIR652-201ENST00000385278 98 ntBASIC0.82□□□□□ -2.28
NUP43Q8NFH3 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
NUP43Q8NFH3 PSMC1P5-201ENST00000512850 177 ntBASIC0.82□□□□□ -2.28
NUP43Q8NFH3 RNU6-645P-201ENST00000364649 106 ntBASIC0.81□□□□□ -2.28
NUP43Q8NFH3 RNU6-110P-201ENST00000384508 104 ntBASIC0.81□□□□□ -2.28
NUP43Q8NFH3 SNORA40.8-201ENST00000411034 126 ntBASIC0.81□□□□□ -2.28
NUP43Q8NFH3 HMGN2P22-201ENST00000427588 175 ntBASIC0.81□□□□□ -2.28
NUP43Q8NFH3 SCARNA17.3-201ENST00000516381 125 ntBASIC0.81□□□□□ -2.28
NUP43Q8NFH3 MIR1273G-201ENST00000577677 100 ntBASIC0.81□□□□□ -2.28
NUP43Q8NFH3 SNORA25.4-201ENST00000363666 124 ntBASIC0.8□□□□□ -2.28
NUP43Q8NFH3 RNU6-1187P-201ENST00000364771 110 ntBASIC0.8□□□□□ -2.28
NUP43Q8NFH3 Y_RNA.340-201ENST00000365330 92 ntBASIC0.8□□□□□ -2.28
NUP43Q8NFH3 MIR5706-201ENST00000579841 80 ntBASIC0.8□□□□□ -2.28
NUP43Q8NFH3 MIR6739-201ENST00000622461 75 ntBASIC0.8□□□□□ -2.28
NUP43Q8NFH3 Y_RNA.178-201ENST00000363832 102 ntBASIC0.79□□□□□ -2.28
NUP43Q8NFH3 SNORD114-2-201ENST00000363953 78 ntBASIC0.79□□□□□ -2.28
NUP43Q8NFH3 MIR4698-201ENST00000577795 80 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 259 ms