Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 Y_RNA.186-201ENST00000363899 92 ntBASIC-4.5□□□□□ -3.13
LINC00643Q86TS7 Y_RNA.275-201ENST00000364726 110 ntBASIC-4.5□□□□□ -3.13
LINC00643Q86TS7 SNORD116-1-201ENST00000384335 95 ntBASIC-4.5□□□□□ -3.13
LINC00643Q86TS7 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-4.5□□□□□ -3.13
LINC00643Q86TS7 RNU6-1113P-201ENST00000384348 107 ntBASIC-4.51□□□□□ -3.13
LINC00643Q86TS7 Y_RNA.213-201ENST00000364178 111 ntBASIC-4.52□□□□□ -3.13
LINC00643Q86TS7 Y_RNA.325-201ENST00000365171 122 ntBASIC-4.52□□□□□ -3.13
LINC00643Q86TS7 SNORD18B-201ENST00000365659 72 ntBASIC-4.52□□□□□ -3.13
LINC00643Q86TS7 RNU6-1188P-201ENST00000363795 107 ntBASIC-4.53□□□□□ -3.13
LINC00643Q86TS7 Y_RNA.509-201ENST00000384506 99 ntBASIC-4.53□□□□□ -3.13
LINC00643Q86TS7 Y_RNA.559-201ENST00000384686 107 ntBASIC-4.53□□□□□ -3.13
LINC00643Q86TS7 SNORD116-6-201ENST00000384711 96 ntBASIC-4.53□□□□□ -3.13
LINC00643Q86TS7 MIR548D2-201ENST00000384955 97 ntBASIC-4.53□□□□□ -3.13
LINC00643Q86TS7 RNU6-995P-201ENST00000391244 107 ntBASIC-4.53□□□□□ -3.13
LINC00643Q86TS7 RNU7-174P-201ENST00000516248 59 ntBASIC-4.53□□□□□ -3.13
LINC00643Q86TS7 Y_RNA.59-201ENST00000362828 102 ntBASIC-4.54□□□□□ -3.14
LINC00643Q86TS7 RNU6-309P-201ENST00000364573 106 ntBASIC-4.54□□□□□ -3.14
LINC00643Q86TS7 Y_RNA.419-201ENST00000384041 102 ntBASIC-4.54□□□□□ -3.14
LINC00643Q86TS7 RNU6-519P-201ENST00000410590 108 ntBASIC-4.54□□□□□ -3.14
LINC00643Q86TS7 MIR3144-201ENST00000579460 79 ntBASIC-4.54□□□□□ -3.14
LINC00643Q86TS7 Y_RNA.352-201ENST00000365439 102 ntBASIC-4.55□□□□□ -3.14
LINC00643Q86TS7 RNU6-644P-201ENST00000391155 98 ntBASIC-4.55□□□□□ -3.14
LINC00643Q86TS7 RNU6-587P-201ENST00000391282 106 ntBASIC-4.55□□□□□ -3.14
LINC00643Q86TS7 Y_RNA.606-201ENST00000410579 103 ntBASIC-4.55□□□□□ -3.14
LINC00643Q86TS7 SNORD2.1-201ENST00000458762 69 ntBASIC-4.55□□□□□ -3.14
LINC00643Q86TS7 MIR5690-201ENST00000583739 73 ntBASIC-4.55□□□□□ -3.14
LINC00643Q86TS7 AC104985.2-201ENST00000620598 500 ntBASIC-4.55□□□□□ -3.14
LINC00643Q86TS7 RNU6-1081P-201ENST00000384537 107 ntBASIC-4.56□□□□□ -3.14
LINC00643Q86TS7 RNY3P8-201ENST00000411366 126 ntBASIC-4.56□□□□□ -3.14
LINC00643Q86TS7 SNORD11.1-201ENST00000459482 85 ntBASIC-4.56□□□□□ -3.14
LINC00643Q86TS7 SNORD116.3-201ENST00000517176 78 ntBASIC-4.56□□□□□ -3.14
LINC00643Q86TS7 AC009094.1-201ENST00000564443 426 ntBASIC-4.56□□□□□ -3.14
LINC00643Q86TS7 MIR3646-201ENST00000578301 84 ntBASIC-4.56□□□□□ -3.14
LINC00643Q86TS7 AC012531.4-201ENST00000616509 177 ntBASIC-4.56□□□□□ -3.14
LINC00643Q86TS7 RNU6-694P-201ENST00000364071 147 ntBASIC-4.57□□□□□ -3.14
LINC00643Q86TS7 RNY1P1-201ENST00000364372 112 ntBASIC-4.57□□□□□ -3.14
LINC00643Q86TS7 RNU6-510P-201ENST00000391239 108 ntBASIC-4.57□□□□□ -3.14
LINC00643Q86TS7 Y_RNA.183-201ENST00000363882 113 ntBASIC-4.58□□□□□ -3.14
LINC00643Q86TS7 Y_RNA.198-201ENST00000364013 98 ntBASIC-4.59□□□□□ -3.14
LINC00643Q86TS7 RNU6-645P-201ENST00000364649 106 ntBASIC-4.59□□□□□ -3.14
LINC00643Q86TS7 RNU4-14P-201ENST00000410858 122 ntBASIC-4.59□□□□□ -3.14
LINC00643Q86TS7 AC090574.1-201ENST00000623186 233 ntBASIC-4.59□□□□□ -3.14
LINC00643Q86TS7 Y_RNA.401-201ENST00000383965 117 ntBASIC-4.6□□□□□ -3.15
LINC00643Q86TS7 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-4.6□□□□□ -3.15
LINC00643Q86TS7 RNU6-768P-201ENST00000384683 107 ntBASIC-4.61□□□□□ -3.15
LINC00643Q86TS7 RNU6-956P-201ENST00000458868 103 ntBASIC-4.61□□□□□ -3.15
LINC00643Q86TS7 SNORD113-3-201ENST00000364830 72 ntBASIC-4.62□□□□□ -3.15
LINC00643Q86TS7 Y_RNA.797-201ENST00000515977 94 ntBASIC-4.62□□□□□ -3.15
LINC00643Q86TS7 SNORD63.2-201ENST00000516303 64 ntBASIC-4.62□□□□□ -3.15
LINC00643Q86TS7 Y_RNA.695-201ENST00000516715 107 ntBASIC-4.62□□□□□ -3.15
LINC00643Q86TS7 Y_RNA.8-201ENST00000362353 102 ntBASIC-4.63□□□□□ -3.15
LINC00643Q86TS7 RNU6-1079P-201ENST00000362861 110 ntBASIC-4.63□□□□□ -3.15
LINC00643Q86TS7 Y_RNA.402-201ENST00000383972 102 ntBASIC-4.63□□□□□ -3.15
LINC00643Q86TS7 SNORD116-2-201ENST00000384274 95 ntBASIC-4.63□□□□□ -3.15
LINC00643Q86TS7 Y_RNA.629-201ENST00000411368 105 ntBASIC-4.63□□□□□ -3.15
LINC00643Q86TS7 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-4.63□□□□□ -3.15
LINC00643Q86TS7 Z99129.1-201ENST00000612510 255 ntBASIC-4.63□□□□□ -3.15
LINC00643Q86TS7 AC002553.4-201ENST00000616896 331 ntBASIC-4.63□□□□□ -3.15
LINC00643Q86TS7 RNU5E-3P-201ENST00000515913 68 ntBASIC-4.64□□□□□ -3.15
LINC00643Q86TS7 SNORD58B-201ENST00000607313 66 ntBASIC-4.64□□□□□ -3.15
LINC00643Q86TS7 MIRLET7A2-201ENST00000362105 72 ntBASIC-4.65□□□□□ -3.15
LINC00643Q86TS7 Y_RNA.154-201ENST00000363624 102 ntBASIC-4.65□□□□□ -3.15
LINC00643Q86TS7 Y_RNA.420-201ENST00000384043 110 ntBASIC-4.65□□□□□ -3.15
LINC00643Q86TS7 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-4.65□□□□□ -3.15
LINC00643Q86TS7 MTRNR2L9-201ENST00000622562 75 ntBASIC-4.65□□□□□ -3.15
LINC00643Q86TS7 RNU6-816P-201ENST00000390914 107 ntBASIC-4.66□□□□□ -3.16
LINC00643Q86TS7 RNU6-1268P-201ENST00000391214 107 ntBASIC-4.66□□□□□ -3.16
LINC00643Q86TS7 SNORA75.5-201ENST00000391291 81 ntBASIC-4.66□□□□□ -3.16
LINC00643Q86TS7 RNU6-1239P-201ENST00000391310 107 ntBASIC-4.66□□□□□ -3.16
LINC00643Q86TS7 Y_RNA.635-201ENST00000459041 101 ntBASIC-4.66□□□□□ -3.16
LINC00643Q86TS7 RNU6-770P-201ENST00000363929 105 ntBASIC-4.67□□□□□ -3.16
LINC00643Q86TS7 RNU6-669P-201ENST00000365575 107 ntBASIC-4.67□□□□□ -3.16
LINC00643Q86TS7 AC109635.3-201ENST00000529536 185 ntBASIC-4.67□□□□□ -3.16
LINC00643Q86TS7 Y_RNA.51-201ENST00000362725 102 ntBASIC-4.68□□□□□ -3.16
LINC00643Q86TS7 RNU6-340P-201ENST00000364005 107 ntBASIC-4.68□□□□□ -3.16
LINC00643Q86TS7 MIR581-201ENST00000384895 96 ntBASIC-4.68□□□□□ -3.16
LINC00643Q86TS7 AC103810.7-201ENST00000607821 91 ntBASIC-4.68□□□□□ -3.16
LINC00643Q86TS7 DLEU2_1.1-201ENST00000612089 120 ntBASIC-4.68□□□□□ -3.16
LINC00643Q86TS7 RNU6-259P-201ENST00000383999 107 ntBASIC-4.69□□□□□ -3.16
LINC00643Q86TS7 Y_RNA.485-201ENST00000384395 102 ntBASIC-4.69□□□□□ -3.16
LINC00643Q86TS7 RNU6-1215P-201ENST00000384441 102 ntBASIC-4.69□□□□□ -3.16
LINC00643Q86TS7 Y_RNA.658-201ENST00000515990 97 ntBASIC-4.69□□□□□ -3.16
LINC00643Q86TS7 MIR4439-201ENST00000583746 80 ntBASIC-4.69□□□□□ -3.16
LINC00643Q86TS7 Y_RNA.16-201ENST00000362421 102 ntBASIC-4.7□□□□□ -3.16
LINC00643Q86TS7 RNU6-698P-201ENST00000363523 107 ntBASIC-4.7□□□□□ -3.16
LINC00643Q86TS7 RNU6-34P-201ENST00000364874 107 ntBASIC-4.7□□□□□ -3.16
LINC00643Q86TS7 MIR577-201ENST00000385196 96 ntBASIC-4.7□□□□□ -3.16
LINC00643Q86TS7 RNU6-681P-201ENST00000364012 104 ntBASIC-4.71□□□□□ -3.16
LINC00643Q86TS7 Y_RNA.262-201ENST00000364641 102 ntBASIC-4.71□□□□□ -3.16
LINC00643Q86TS7 SNORD60-201ENST00000383903 83 ntBASIC-4.71□□□□□ -3.16
LINC00643Q86TS7 Y_RNA.496-201ENST00000384444 101 ntBASIC-4.71□□□□□ -3.16
LINC00643Q86TS7 RNU6-121P-201ENST00000410525 99 ntBASIC-4.71□□□□□ -3.16
LINC00643Q86TS7 MIR3149-201ENST00000584629 83 ntBASIC-4.71□□□□□ -3.16
LINC00643Q86TS7 Y_RNA.359-201ENST00000365498 102 ntBASIC-4.72□□□□□ -3.17
LINC00643Q86TS7 RNU6-1324P-201ENST00000384222 107 ntBASIC-4.72□□□□□ -3.17
LINC00643Q86TS7 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-4.72□□□□□ -3.17
LINC00643Q86TS7 U4.4-201ENST00000620626 117 ntBASIC-4.72□□□□□ -3.17
LINC00643Q86TS7 RNU6-1042P-201ENST00000384204 107 ntBASIC-4.73□□□□□ -3.17
LINC00643Q86TS7 Y_RNA.686-201ENST00000516548 134 ntBASIC-4.73□□□□□ -3.17
LINC00643Q86TS7 AL603755.1-201ENST00000619504 163 ntBASIC-4.73□□□□□ -3.17
Retrieved 100 of 98,524 protein–RNA pairs in 8.4 ms