Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.96□□□□□ -2.26
RNF111Q6ZNA4 MIR96-201ENST00000362288 78 ntBASIC0.95□□□□□ -2.26
RNF111Q6ZNA4 RNU6-1187P-201ENST00000364771 110 ntBASIC0.95□□□□□ -2.26
RNF111Q6ZNA4 RNU6-539P-201ENST00000516665 103 ntBASIC0.95□□□□□ -2.26
RNF111Q6ZNA4 AC018659.1-201ENST00000551083 169 ntBASIC0.95□□□□□ -2.26
RNF111Q6ZNA4 MIR8053-201ENST00000613344 75 ntBASIC0.95□□□□□ -2.26
RNF111Q6ZNA4 SNORD114-22-201ENST00000365423 72 ntBASIC0.94□□□□□ -2.26
RNF111Q6ZNA4 RNU6-663P-201ENST00000391105 106 ntBASIC0.94□□□□□ -2.26
RNF111Q6ZNA4 ACA64.5-201ENST00000516207 127 ntBASIC0.94□□□□□ -2.26
RNF111Q6ZNA4 RNU6-881P-201ENST00000516813 102 ntBASIC0.94□□□□□ -2.26
RNF111Q6ZNA4 MIR4752-201ENST00000579672 72 ntBASIC0.94□□□□□ -2.26
RNF111Q6ZNA4 AC069503.3-201ENST00000618674 145 ntBASIC0.94□□□□□ -2.26
RNF111Q6ZNA4 RNU4-38P-201ENST00000364472 129 ntBASIC0.93□□□□□ -2.26
RNF111Q6ZNA4 MIR608-201ENST00000384820 100 ntBASIC0.93□□□□□ -2.26
RNF111Q6ZNA4 RNU6-788P-201ENST00000390967 104 ntBASIC0.93□□□□□ -2.26
RNF111Q6ZNA4 AC006210.1-201ENST00000424882 111 ntBASIC0.93□□□□□ -2.26
RNF111Q6ZNA4 MIR3657-201ENST00000584818 117 ntBASIC0.93□□□□□ -2.26
RNF111Q6ZNA4 RNU6-990P-201ENST00000364385 104 ntBASIC0.92□□□□□ -2.26
RNF111Q6ZNA4 RNA5SP517-201ENST00000364724 117 ntBASIC0.92□□□□□ -2.26
RNF111Q6ZNA4 MIR140-201ENST00000385282 100 ntBASIC0.92□□□□□ -2.26
RNF111Q6ZNA4 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.92□□□□□ -2.26
RNF111Q6ZNA4 AC073869.9-201ENST00000641610 120 ntBASIC0.92□□□□□ -2.26
RNF111Q6ZNA4 SNORD113.1-201ENST00000363280 73 ntBASIC0.91□□□□□ -2.26
RNF111Q6ZNA4 SNORD114-27-201ENST00000363766 70 ntBASIC0.91□□□□□ -2.26
RNF111Q6ZNA4 RNU6-260P-201ENST00000384092 107 ntBASIC0.91□□□□□ -2.26
RNF111Q6ZNA4 SNORD110-201ENST00000408189 75 ntBASIC0.91□□□□□ -2.26
RNF111Q6ZNA4 MIR4473-201ENST00000583731 91 ntBASIC0.91□□□□□ -2.26
RNF111Q6ZNA4 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
RNF111Q6ZNA4 Y_RNA.386-201ENST00000383913 105 ntBASIC0.9□□□□□ -2.27
RNF111Q6ZNA4 RNA5SP147-201ENST00000516493 109 ntBASIC0.9□□□□□ -2.27
RNF111Q6ZNA4 SNORA25.18-201ENST00000607153 114 ntBASIC0.9□□□□□ -2.27
RNF111Q6ZNA4 SNORA70.25-201ENST00000612741 95 ntBASIC0.9□□□□□ -2.27
RNF111Q6ZNA4 RNU6-590P-201ENST00000365039 107 ntBASIC0.89□□□□□ -2.27
RNF111Q6ZNA4 RNU6-982P-201ENST00000516216 102 ntBASIC0.89□□□□□ -2.27
RNF111Q6ZNA4 AC092634.7-201ENST00000621022 103 ntBASIC0.89□□□□□ -2.27
RNF111Q6ZNA4 U6.111-201ENST00000636093 83 ntBASIC0.89□□□□□ -2.27
RNF111Q6ZNA4 MIR6767-201ENST00000637302 66 ntBASIC0.89□□□□□ -2.27
RNF111Q6ZNA4 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
RNF111Q6ZNA4 AC069271.1-201ENST00000445577 156 ntBASIC0.88□□□□□ -2.27
RNF111Q6ZNA4 SNORD114-4-201ENST00000363962 75 ntBASIC0.87□□□□□ -2.27
RNF111Q6ZNA4 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.87□□□□□ -2.27
RNF111Q6ZNA4 SNORA40.17-201ENST00000517256 115 ntBASIC0.87□□□□□ -2.27
RNF111Q6ZNA4 MIR548AE1-201ENST00000583292 70 ntBASIC0.87□□□□□ -2.27
RNF111Q6ZNA4 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.86□□□□□ -2.27
RNF111Q6ZNA4 RNU6-1216P-201ENST00000362590 107 ntBASIC0.86□□□□□ -2.27
RNF111Q6ZNA4 RNU1-93P-201ENST00000364704 169 ntBASIC0.86□□□□□ -2.27
RNF111Q6ZNA4 Y_RNA.407-201ENST00000383986 113 ntBASIC0.86□□□□□ -2.27
RNF111Q6ZNA4 MIR532-201ENST00000385025 91 ntBASIC0.86□□□□□ -2.27
RNF111Q6ZNA4 RNU6-800P-201ENST00000384473 103 ntBASIC0.85□□□□□ -2.27
RNF111Q6ZNA4 MIR7-2-201ENST00000384970 110 ntBASIC0.85□□□□□ -2.27
RNF111Q6ZNA4 RNU6-630P-201ENST00000391258 106 ntBASIC0.85□□□□□ -2.27
RNF111Q6ZNA4 MIR6857-201ENST00000613267 93 ntBASIC0.85□□□□□ -2.27
RNF111Q6ZNA4 MIR6515-201ENST00000619843 57 ntBASIC0.85□□□□□ -2.27
RNF111Q6ZNA4 SNORA2.1-201ENST00000363089 137 ntBASIC0.84□□□□□ -2.27
RNF111Q6ZNA4 SNORD116-24-201ENST00000384549 92 ntBASIC0.84□□□□□ -2.27
RNF111Q6ZNA4 MIR520E-201ENST00000384867 87 ntBASIC0.84□□□□□ -2.27
RNF111Q6ZNA4 MIR652-201ENST00000385278 98 ntBASIC0.84□□□□□ -2.27
RNF111Q6ZNA4 MIR1265-201ENST00000408444 86 ntBASIC0.84□□□□□ -2.27
RNF111Q6ZNA4 RPS29P1-201ENST00000465274 159 ntBASIC0.84□□□□□ -2.27
RNF111Q6ZNA4 RPL39P28-201ENST00000465655 155 ntBASIC0.84□□□□□ -2.27
RNF111Q6ZNA4 PSMC1P5-201ENST00000512850 177 ntBASIC0.84□□□□□ -2.27
RNF111Q6ZNA4 AC211469.2-201ENST00000605461 205 ntBASIC0.84□□□□□ -2.27
RNF111Q6ZNA4 SNORA40.8-201ENST00000411034 126 ntBASIC0.83□□□□□ -2.28
RNF111Q6ZNA4 snoU13.13-201ENST00000458842 104 ntBASIC0.83□□□□□ -2.28
RNF111Q6ZNA4 AL109933.3-201ENST00000619095 188 ntBASIC0.83□□□□□ -2.28
RNF111Q6ZNA4 SNORD118-201ENST00000363593 134 ntBASIC0.82□□□□□ -2.28
RNF111Q6ZNA4 MIR146A-201ENST00000385201 99 ntBASIC0.82□□□□□ -2.28
RNF111Q6ZNA4 RNA5SP480-201ENST00000516840 109 ntBASIC0.82□□□□□ -2.28
RNF111Q6ZNA4 RNU1-29P-201ENST00000606574 126 ntBASIC0.82□□□□□ -2.28
RNF111Q6ZNA4 AC022709.1-201ENST00000615967 87 ntBASIC0.82□□□□□ -2.28
RNF111Q6ZNA4 RNU6-645P-201ENST00000364649 106 ntBASIC0.81□□□□□ -2.28
RNF111Q6ZNA4 Y_RNA.340-201ENST00000365330 92 ntBASIC0.81□□□□□ -2.28
RNF111Q6ZNA4 Y_RNA.443-201ENST00000384135 111 ntBASIC0.81□□□□□ -2.28
RNF111Q6ZNA4 RNU6-110P-201ENST00000384508 104 ntBASIC0.81□□□□□ -2.28
RNF111Q6ZNA4 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.81□□□□□ -2.28
RNF111Q6ZNA4 SNORD71-201ENST00000411292 86 ntBASIC0.81□□□□□ -2.28
RNF111Q6ZNA4 AC125388.1-201ENST00000459631 156 ntBASIC0.81□□□□□ -2.28
RNF111Q6ZNA4 RNU6-351P-201ENST00000516097 100 ntBASIC0.81□□□□□ -2.28
RNF111Q6ZNA4 SCARNA17.3-201ENST00000516381 125 ntBASIC0.81□□□□□ -2.28
RNF111Q6ZNA4 RNU4-54P-201ENST00000516428 129 ntBASIC0.81□□□□□ -2.28
RNF111Q6ZNA4 RNU6-1223P-201ENST00000517124 104 ntBASIC0.81□□□□□ -2.28
RNF111Q6ZNA4 AC005520.4-201ENST00000604337 90 ntBASIC0.81□□□□□ -2.28
RNF111Q6ZNA4 MIR373-201ENST00000362273 69 ntBASIC0.8□□□□□ -2.28
RNF111Q6ZNA4 HMGN2P22-201ENST00000427588 175 ntBASIC0.8□□□□□ -2.28
RNF111Q6ZNA4 MTND4LP1-201ENST00000446263 157 ntBASIC0.8□□□□□ -2.28
RNF111Q6ZNA4 MIR4698-201ENST00000577795 80 ntBASIC0.8□□□□□ -2.28
RNF111Q6ZNA4 MIR151B-201ENST00000584249 96 ntBASIC0.8□□□□□ -2.28
RNF111Q6ZNA4 MIR6788-201ENST00000618842 66 ntBASIC0.8□□□□□ -2.28
RNF111Q6ZNA4 Y_RNA.423-201ENST00000384057 113 ntBASIC0.79□□□□□ -2.28
RNF111Q6ZNA4 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.79□□□□□ -2.28
RNF111Q6ZNA4 AC021146.9-201ENST00000512503 156 ntBASIC0.79□□□□□ -2.28
RNF111Q6ZNA4 MIR3973-201ENST00000579824 107 ntBASIC0.79□□□□□ -2.28
RNF111Q6ZNA4 AL590095.2-201ENST00000604136 117 ntBASIC0.79□□□□□ -2.28
RNF111Q6ZNA4 uc_338.10-201ENST00000621872 182 ntBASIC0.79□□□□□ -2.28
RNF111Q6ZNA4 SNORA25.4-201ENST00000363666 124 ntBASIC0.78□□□□□ -2.28
RNF111Q6ZNA4 SNORD114-2-201ENST00000363953 78 ntBASIC0.78□□□□□ -2.28
RNF111Q6ZNA4 RNU6-668P-201ENST00000364180 107 ntBASIC0.78□□□□□ -2.28
RNF111Q6ZNA4 MIR582-201ENST00000365731 98 ntBASIC0.78□□□□□ -2.28
RNF111Q6ZNA4 MIR518A1-201ENST00000385068 85 ntBASIC0.78□□□□□ -2.28
RNF111Q6ZNA4 MIR548J-201ENST00000408833 112 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 323.7 ms