Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 RNA5SP257-201ENST00000363023 116 ntBASIC1.76□□□□□ -2.13
PRPF38BQ5VTL8 MIR517C-201ENST00000385103 95 ntBASIC1.76□□□□□ -2.13
PRPF38BQ5VTL8 SNORD114-27-201ENST00000363766 70 ntBASIC1.75□□□□□ -2.13
PRPF38BQ5VTL8 RNU7-74P-201ENST00000459104 62 ntBASIC1.75□□□□□ -2.13
PRPF38BQ5VTL8 SCARNA21.1-201ENST00000515996 128 ntBASIC1.75□□□□□ -2.13
PRPF38BQ5VTL8 MIR4639-201ENST00000584938 69 ntBASIC1.75□□□□□ -2.13
PRPF38BQ5VTL8 AC244669.1-204ENST00000621564 178 ntBASIC1.75□□□□□ -2.13
PRPF38BQ5VTL8 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.74□□□□□ -2.13
PRPF38BQ5VTL8 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
PRPF38BQ5VTL8 RNA5SP121-201ENST00000516537 101 ntBASIC1.74□□□□□ -2.13
PRPF38BQ5VTL8 MIR466-201ENST00000580653 84 ntBASIC1.74□□□□□ -2.13
PRPF38BQ5VTL8 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.74□□□□□ -2.13
PRPF38BQ5VTL8 RNU6-990P-201ENST00000364385 104 ntBASIC1.73□□□□□ -2.13
PRPF38BQ5VTL8 RNU6-656P-201ENST00000516785 107 ntBASIC1.73□□□□□ -2.13
PRPF38BQ5VTL8 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
PRPF38BQ5VTL8 SNORA2.1-201ENST00000363089 137 ntBASIC1.72□□□□□ -2.13
PRPF38BQ5VTL8 RNU6-35P-201ENST00000384530 107 ntBASIC1.72□□□□□ -2.13
PRPF38BQ5VTL8 SNORD28-201ENST00000384706 75 ntBASIC1.72□□□□□ -2.13
PRPF38BQ5VTL8 AL590095.2-201ENST00000604136 117 ntBASIC1.72□□□□□ -2.13
PRPF38BQ5VTL8 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
PRPF38BQ5VTL8 RNU6-940P-201ENST00000363433 104 ntBASIC1.71□□□□□ -2.14
PRPF38BQ5VTL8 SNORA16.1-201ENST00000364597 132 ntBASIC1.71□□□□□ -2.14
PRPF38BQ5VTL8 MIR200A-201ENST00000384875 90 ntBASIC1.71□□□□□ -2.14
PRPF38BQ5VTL8 SNORD41.1-201ENST00000391000 69 ntBASIC1.71□□□□□ -2.14
PRPF38BQ5VTL8 RNA5SP299-201ENST00000391203 116 ntBASIC1.71□□□□□ -2.14
PRPF38BQ5VTL8 SNORD124-201ENST00000459577 104 ntBASIC1.71□□□□□ -2.14
PRPF38BQ5VTL8 RNA5SP147-201ENST00000516493 109 ntBASIC1.71□□□□□ -2.14
PRPF38BQ5VTL8 RNU6-446P-201ENST00000362827 106 ntBASIC1.7□□□□□ -2.14
PRPF38BQ5VTL8 MIR6086-201ENST00000638065 55 ntBASIC1.7□□□□□ -2.14
PRPF38BQ5VTL8 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.7□□□□□ -2.14
PRPF38BQ5VTL8 MIR19B1-201ENST00000384829 87 ntBASIC1.69□□□□□ -2.14
PRPF38BQ5VTL8 MT-TY-201ENST00000387409 66 ntBASIC1.69□□□□□ -2.14
PRPF38BQ5VTL8 MIR5000-201ENST00000577717 103 ntBASIC1.69□□□□□ -2.14
PRPF38BQ5VTL8 MIR6739-201ENST00000622461 75 ntBASIC1.69□□□□□ -2.14
PRPF38BQ5VTL8 MIR6767-201ENST00000637302 66 ntBASIC1.69□□□□□ -2.14
PRPF38BQ5VTL8 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
PRPF38BQ5VTL8 RNA5SP215-201ENST00000363440 122 ntBASIC1.68□□□□□ -2.14
PRPF38BQ5VTL8 RPS29P23-201ENST00000458635 123 ntBASIC1.68□□□□□ -2.14
PRPF38BQ5VTL8 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.68□□□□□ -2.14
PRPF38BQ5VTL8 MIR3122-201ENST00000577243 73 ntBASIC1.68□□□□□ -2.14
PRPF38BQ5VTL8 MIR3678-201ENST00000578455 94 ntBASIC1.68□□□□□ -2.14
PRPF38BQ5VTL8 MIR3612-201ENST00000579753 87 ntBASIC1.68□□□□□ -2.14
PRPF38BQ5VTL8 SNORA25.8-201ENST00000364831 128 ntBASIC1.67□□□□□ -2.14
PRPF38BQ5VTL8 RNU6-716P-201ENST00000365621 103 ntBASIC1.67□□□□□ -2.14
PRPF38BQ5VTL8 MIR573-201ENST00000384964 99 ntBASIC1.67□□□□□ -2.14
PRPF38BQ5VTL8 MIR1323-201ENST00000408090 73 ntBASIC1.67□□□□□ -2.14
PRPF38BQ5VTL8 RNU6-1089P-201ENST00000516473 104 ntBASIC1.67□□□□□ -2.14
PRPF38BQ5VTL8 AC025627.3-201ENST00000582078 182 ntBASIC1.67□□□□□ -2.14
PRPF38BQ5VTL8 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.67□□□□□ -2.14
PRPF38BQ5VTL8 SNORD18A-201ENST00000363753 72 ntBASIC1.66□□□□□ -2.14
PRPF38BQ5VTL8 MIR4419B-201ENST00000577260 68 ntBASIC1.66□□□□□ -2.14
PRPF38BQ5VTL8 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
PRPF38BQ5VTL8 RNU6-726P-201ENST00000364680 107 ntBASIC1.65□□□□□ -2.15
PRPF38BQ5VTL8 RNU6-1335P-201ENST00000365426 107 ntBASIC1.65□□□□□ -2.15
PRPF38BQ5VTL8 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.65□□□□□ -2.15
PRPF38BQ5VTL8 MIR4460-201ENST00000577862 86 ntBASIC1.65□□□□□ -2.15
PRPF38BQ5VTL8 RNU6-997P-201ENST00000384725 107 ntBASIC1.64□□□□□ -2.15
PRPF38BQ5VTL8 RNA5SP330-201ENST00000517096 96 ntBASIC1.64□□□□□ -2.15
PRPF38BQ5VTL8 MIR924-201ENST00000638017 53 ntBASIC1.64□□□□□ -2.15
PRPF38BQ5VTL8 RNU1-141P-201ENST00000364623 158 ntBASIC1.63□□□□□ -2.15
PRPF38BQ5VTL8 SNORD26-201ENST00000384147 75 ntBASIC1.63□□□□□ -2.15
PRPF38BQ5VTL8 RNU6-122P-201ENST00000516818 107 ntBASIC1.63□□□□□ -2.15
PRPF38BQ5VTL8 RNA5SP47-201ENST00000517230 109 ntBASIC1.63□□□□□ -2.15
PRPF38BQ5VTL8 MIR26B-201ENST00000362251 77 ntBASIC1.62□□□□□ -2.15
PRPF38BQ5VTL8 SNORD114-24-201ENST00000365029 72 ntBASIC1.62□□□□□ -2.15
PRPF38BQ5VTL8 SNORA75.1-201ENST00000391130 148 ntBASIC1.62□□□□□ -2.15
PRPF38BQ5VTL8 RNU6-92P-201ENST00000605893 104 ntBASIC1.62□□□□□ -2.15
PRPF38BQ5VTL8 MIR7978-201ENST00000636158 59 ntBASIC1.62□□□□□ -2.15
PRPF38BQ5VTL8 SNORD113-4-201ENST00000364802 75 ntBASIC1.61□□□□□ -2.15
PRPF38BQ5VTL8 SNORD48-201ENST00000364953 64 ntBASIC1.61□□□□□ -2.15
PRPF38BQ5VTL8 AC018659.1-201ENST00000551083 169 ntBASIC1.61□□□□□ -2.15
PRPF38BQ5VTL8 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.61□□□□□ -2.15
PRPF38BQ5VTL8 MIR548V-201ENST00000584165 80 ntBASIC1.61□□□□□ -2.15
PRPF38BQ5VTL8 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.6□□□□□ -2.15
PRPF38BQ5VTL8 AL157398.1-201ENST00000452981 186 ntBASIC1.6□□□□□ -2.15
PRPF38BQ5VTL8 RNU5B-6P-201ENST00000516765 68 ntBASIC1.6□□□□□ -2.15
PRPF38BQ5VTL8 MIR3938-201ENST00000582157 103 ntBASIC1.6□□□□□ -2.15
PRPF38BQ5VTL8 RNU6-269P-201ENST00000391077 97 ntBASIC1.59□□□□□ -2.15
PRPF38BQ5VTL8 snoU13.13-201ENST00000458842 104 ntBASIC1.59□□□□□ -2.15
PRPF38BQ5VTL8 AC011195.1-201ENST00000578177 177 ntBASIC1.59□□□□□ -2.15
PRPF38BQ5VTL8 SNORD60.1-201ENST00000362451 73 ntBASIC1.58□□□□□ -2.16
PRPF38BQ5VTL8 Y_RNA.250-201ENST00000364542 110 ntBASIC1.58□□□□□ -2.16
PRPF38BQ5VTL8 RNU6-302P-201ENST00000365249 107 ntBASIC1.58□□□□□ -2.16
PRPF38BQ5VTL8 MIR521-2-201ENST00000384818 87 ntBASIC1.58□□□□□ -2.16
PRPF38BQ5VTL8 SCARNA16.5-201ENST00000517114 183 ntBASIC1.58□□□□□ -2.16
PRPF38BQ5VTL8 RNA5SP404-201ENST00000517118 132 ntBASIC1.58□□□□□ -2.16
PRPF38BQ5VTL8 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
PRPF38BQ5VTL8 RNU6-1162P-201ENST00000384443 104 ntBASIC1.57□□□□□ -2.16
PRPF38BQ5VTL8 MIR630-201ENST00000384957 97 ntBASIC1.57□□□□□ -2.16
PRPF38BQ5VTL8 SNORD99-201ENST00000408612 74 ntBASIC1.57□□□□□ -2.16
PRPF38BQ5VTL8 Y_RNA.722-201ENST00000517279 114 ntBASIC1.57□□□□□ -2.16
PRPF38BQ5VTL8 SNORD114-4-201ENST00000363962 75 ntBASIC1.56□□□□□ -2.16
PRPF38BQ5VTL8 RNA5SP484-201ENST00000458857 111 ntBASIC1.56□□□□□ -2.16
PRPF38BQ5VTL8 RNA5SP255-201ENST00000516370 107 ntBASIC1.56□□□□□ -2.16
PRPF38BQ5VTL8 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
PRPF38BQ5VTL8 SNORA8.2-201ENST00000384372 139 ntBASIC1.55□□□□□ -2.16
PRPF38BQ5VTL8 MIR618-201ENST00000385287 98 ntBASIC1.55□□□□□ -2.16
PRPF38BQ5VTL8 RNA5SP227-201ENST00000516184 113 ntBASIC1.55□□□□□ -2.16
PRPF38BQ5VTL8 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
PRPF38BQ5VTL8 MIR548C-201ENST00000384815 97 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 179.6 ms