Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
RSPO4Q2I0M5 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.6□□□□□ -2.15
RSPO4Q2I0M5 SNORA16.1-201ENST00000364597 132 ntBASIC1.6□□□□□ -2.15
RSPO4Q2I0M5 RNA5SP489-201ENST00000410986 109 ntBASIC1.6□□□□□ -2.15
RSPO4Q2I0M5 RNU7-21P-201ENST00000459430 62 ntBASIC1.6□□□□□ -2.15
RSPO4Q2I0M5 RNU5B-6P-201ENST00000516765 68 ntBASIC1.6□□□□□ -2.15
RSPO4Q2I0M5 MIR644A-201ENST00000385262 94 ntBASIC1.59□□□□□ -2.15
RSPO4Q2I0M5 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
RSPO4Q2I0M5 MIR548L-201ENST00000408303 86 ntBASIC1.59□□□□□ -2.15
RSPO4Q2I0M5 RPS29P1-201ENST00000465274 159 ntBASIC1.59□□□□□ -2.15
RSPO4Q2I0M5 RNU6-135P-201ENST00000516769 101 ntBASIC1.59□□□□□ -2.15
RSPO4Q2I0M5 MIR3198-2-201ENST00000577868 80 ntBASIC1.59□□□□□ -2.15
RSPO4Q2I0M5 MIR4639-201ENST00000584938 69 ntBASIC1.59□□□□□ -2.15
RSPO4Q2I0M5 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.59□□□□□ -2.15
RSPO4Q2I0M5 AC244669.1-204ENST00000621564 178 ntBASIC1.59□□□□□ -2.15
RSPO4Q2I0M5 SNORA9.1-201ENST00000362412 131 ntBASIC1.58□□□□□ -2.16
RSPO4Q2I0M5 SNORD28-201ENST00000384706 75 ntBASIC1.58□□□□□ -2.16
RSPO4Q2I0M5 MIR520E-201ENST00000384867 87 ntBASIC1.58□□□□□ -2.16
RSPO4Q2I0M5 MIR758-201ENST00000390227 88 ntBASIC1.58□□□□□ -2.16
RSPO4Q2I0M5 MIR934-201ENST00000401241 83 ntBASIC1.58□□□□□ -2.16
RSPO4Q2I0M5 HMGN2P19-201ENST00000425149 265 ntBASIC1.58□□□□□ -2.16
RSPO4Q2I0M5 MIR4419B-201ENST00000577260 68 ntBASIC1.58□□□□□ -2.16
RSPO4Q2I0M5 MIR6078-201ENST00000611069 100 ntBASIC1.58□□□□□ -2.16
RSPO4Q2I0M5 RNU6-838P-201ENST00000363399 108 ntBASIC1.57□□□□□ -2.16
RSPO4Q2I0M5 RNU6-1246P-201ENST00000391064 107 ntBASIC1.57□□□□□ -2.16
RSPO4Q2I0M5 RN7SKP88-201ENST00000516847 250 ntBASIC1.57□□□□□ -2.16
RSPO4Q2I0M5 MIR4448-201ENST00000584360 86 ntBASIC1.57□□□□□ -2.16
RSPO4Q2I0M5 7SK.8-201ENST00000612110 250 ntBASIC1.57□□□□□ -2.16
RSPO4Q2I0M5 MIR7110-201ENST00000612638 86 ntBASIC1.57□□□□□ -2.16
RSPO4Q2I0M5 7SK.11-201ENST00000615477 250 ntBASIC1.57□□□□□ -2.16
RSPO4Q2I0M5 7SK.13-201ENST00000622040 250 ntBASIC1.57□□□□□ -2.16
RSPO4Q2I0M5 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.57□□□□□ -2.16
RSPO4Q2I0M5 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.56□□□□□ -2.16
RSPO4Q2I0M5 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.56□□□□□ -2.16
RSPO4Q2I0M5 RNU6-726P-201ENST00000364680 107 ntBASIC1.56□□□□□ -2.16
RSPO4Q2I0M5 SNORA25.8-201ENST00000364831 128 ntBASIC1.56□□□□□ -2.16
RSPO4Q2I0M5 RNU4-52P-201ENST00000384209 138 ntBASIC1.56□□□□□ -2.16
RSPO4Q2I0M5 SNORA80D-201ENST00000384488 135 ntBASIC1.56□□□□□ -2.16
RSPO4Q2I0M5 SNORD116-16-201ENST00000384533 92 ntBASIC1.56□□□□□ -2.16
RSPO4Q2I0M5 MIR30A-201ENST00000385092 71 ntBASIC1.56□□□□□ -2.16
RSPO4Q2I0M5 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.56□□□□□ -2.16
RSPO4Q2I0M5 HMGN2P38-201ENST00000423806 265 ntBASIC1.56□□□□□ -2.16
RSPO4Q2I0M5 RNU7-90P-201ENST00000459216 62 ntBASIC1.56□□□□□ -2.16
RSPO4Q2I0M5 AC002350.1-201ENST00000490759 375 ntBASIC1.56□□□□□ -2.16
RSPO4Q2I0M5 RNU1-93P-201ENST00000364704 169 ntBASIC1.55□□□□□ -2.16
RSPO4Q2I0M5 SNORA63.6-201ENST00000364921 119 ntBASIC1.55□□□□□ -2.16
RSPO4Q2I0M5 MIR676-201ENST00000390702 67 ntBASIC1.55□□□□□ -2.16
RSPO4Q2I0M5 MIR1827-201ENST00000408549 66 ntBASIC1.55□□□□□ -2.16
RSPO4Q2I0M5 MIR151B-201ENST00000584249 96 ntBASIC1.55□□□□□ -2.16
RSPO4Q2I0M5 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.55□□□□□ -2.16
RSPO4Q2I0M5 MIR517C-201ENST00000385103 95 ntBASIC1.54□□□□□ -2.16
RSPO4Q2I0M5 SNORA40B-201ENST00000385573 128 ntBASIC1.54□□□□□ -2.16
RSPO4Q2I0M5 RNU6-269P-201ENST00000391077 97 ntBASIC1.54□□□□□ -2.16
RSPO4Q2I0M5 AC008834.1-201ENST00000511612 175 ntBASIC1.54□□□□□ -2.16
RSPO4Q2I0M5 Y_RNA.74-201ENST00000362911 99 ntBASIC1.53□□□□□ -2.16
RSPO4Q2I0M5 SNORD48-201ENST00000364953 64 ntBASIC1.53□□□□□ -2.16
RSPO4Q2I0M5 SNORA8.2-201ENST00000384372 139 ntBASIC1.53□□□□□ -2.16
RSPO4Q2I0M5 RNU6-469P-201ENST00000516253 101 ntBASIC1.53□□□□□ -2.16
RSPO4Q2I0M5 SCARNA17.3-201ENST00000516381 125 ntBASIC1.53□□□□□ -2.16
RSPO4Q2I0M5 SNORA31.24-201ENST00000517232 57 ntBASIC1.53□□□□□ -2.16
RSPO4Q2I0M5 MIR6788-201ENST00000618842 66 ntBASIC1.53□□□□□ -2.16
RSPO4Q2I0M5 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
RSPO4Q2I0M5 RNU6-910P-201ENST00000390844 107 ntBASIC1.52□□□□□ -2.17
RSPO4Q2I0M5 RNA5SP484-201ENST00000458857 111 ntBASIC1.52□□□□□ -2.17
RSPO4Q2I0M5 CYP3A54P-201ENST00000566950 75 ntBASIC1.52□□□□□ -2.17
RSPO4Q2I0M5 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.51□□□□□ -2.17
RSPO4Q2I0M5 RNU6-810P-201ENST00000364001 107 ntBASIC1.51□□□□□ -2.17
RSPO4Q2I0M5 RNU6-716P-201ENST00000365621 103 ntBASIC1.51□□□□□ -2.17
RSPO4Q2I0M5 MIR548J-201ENST00000408833 112 ntBASIC1.51□□□□□ -2.17
RSPO4Q2I0M5 AL021921.1-201ENST00000442774 93 ntBASIC1.51□□□□□ -2.17
RSPO4Q2I0M5 SNORD79.1-201ENST00000516069 84 ntBASIC1.51□□□□□ -2.17
RSPO4Q2I0M5 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
RSPO4Q2I0M5 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
RSPO4Q2I0M5 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
RSPO4Q2I0M5 MIR652-201ENST00000385278 98 ntBASIC1.5□□□□□ -2.17
RSPO4Q2I0M5 MIR1323-201ENST00000408090 73 ntBASIC1.5□□□□□ -2.17
RSPO4Q2I0M5 RNA5SP47-201ENST00000517230 109 ntBASIC1.5□□□□□ -2.17
RSPO4Q2I0M5 uc_338.20-201ENST00000621563 178 ntBASIC1.5□□□□□ -2.17
RSPO4Q2I0M5 SNORD18A-201ENST00000363753 72 ntBASIC1.49□□□□□ -2.17
RSPO4Q2I0M5 SNORD114-27-201ENST00000363766 70 ntBASIC1.49□□□□□ -2.17
RSPO4Q2I0M5 Y_RNA.282-201ENST00000364793 102 ntBASIC1.49□□□□□ -2.17
RSPO4Q2I0M5 RNA5SP363-201ENST00000365072 115 ntBASIC1.49□□□□□ -2.17
RSPO4Q2I0M5 MIR582-201ENST00000365731 98 ntBASIC1.49□□□□□ -2.17
RSPO4Q2I0M5 Y_RNA.407-201ENST00000383986 113 ntBASIC1.49□□□□□ -2.17
RSPO4Q2I0M5 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.49□□□□□ -2.17
RSPO4Q2I0M5 AL354695.1-201ENST00000427935 228 ntBASIC1.49□□□□□ -2.17
RSPO4Q2I0M5 MIR527-201ENST00000385244 85 ntBASIC1.48□□□□□ -2.17
RSPO4Q2I0M5 MIR548E-201ENST00000408287 88 ntBASIC1.48□□□□□ -2.17
RSPO4Q2I0M5 RNU6-518P-201ENST00000516056 96 ntBASIC1.48□□□□□ -2.17
RSPO4Q2I0M5 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.48□□□□□ -2.17
RSPO4Q2I0M5 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.47□□□□□ -2.17
RSPO4Q2I0M5 RNU6-247P-201ENST00000362636 107 ntBASIC1.47□□□□□ -2.17
RSPO4Q2I0M5 RNU6-1250P-201ENST00000391218 107 ntBASIC1.47□□□□□ -2.17
RSPO4Q2I0M5 RNA5SP436-201ENST00000516020 115 ntBASIC1.47□□□□□ -2.17
RSPO4Q2I0M5 U6.96-201ENST00000636425 70 ntBASIC1.47□□□□□ -2.17
RSPO4Q2I0M5 RNU6-419P-201ENST00000517030 63 ntBASIC1.46□□□□□ -2.18
RSPO4Q2I0M5 MIR4422-201ENST00000581938 83 ntBASIC1.46□□□□□ -2.18
RSPO4Q2I0M5 RN7SL793P-201ENST00000583259 296 ntBASIC1.46□□□□□ -2.18
RSPO4Q2I0M5 RNU6-246P-201ENST00000384702 107 ntBASIC1.45□□□□□ -2.18
RSPO4Q2I0M5 RNU1-78P-201ENST00000391248 165 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 204.1 ms