Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 AC073869.9-201ENST00000641610 120 ntBASIC1.3□□□□□ -2.2
MCCD1P59942 SNORD114-4-201ENST00000363962 75 ntBASIC1.29□□□□□ -2.2
MCCD1P59942 RNU6-645P-201ENST00000364649 106 ntBASIC1.29□□□□□ -2.2
MCCD1P59942 SNORD110-201ENST00000408189 75 ntBASIC1.29□□□□□ -2.2
MCCD1P59942 RNU4-45P-201ENST00000365469 141 ntBASIC1.28□□□□□ -2.2
MCCD1P59942 MIR378A-201ENST00000362177 66 ntBASIC1.27□□□□□ -2.21
MCCD1P59942 RNU6-471P-201ENST00000383944 106 ntBASIC1.27□□□□□ -2.21
MCCD1P59942 MIR7-2-201ENST00000384970 110 ntBASIC1.27□□□□□ -2.21
MCCD1P59942 SNORA2.1-201ENST00000363089 137 ntBASIC1.26□□□□□ -2.21
MCCD1P59942 MIR9-2-201ENST00000384838 87 ntBASIC1.26□□□□□ -2.21
MCCD1P59942 MIR652-201ENST00000385278 98 ntBASIC1.24□□□□□ -2.21
MCCD1P59942 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.24□□□□□ -2.21
MCCD1P59942 SNORA40.17-201ENST00000517256 115 ntBASIC1.24□□□□□ -2.21
MCCD1P59942 SNORA70.25-201ENST00000612741 95 ntBASIC1.24□□□□□ -2.21
MCCD1P59942 Y_RNA.407-201ENST00000383986 113 ntBASIC1.23□□□□□ -2.21
MCCD1P59942 ACA64.5-201ENST00000516207 127 ntBASIC1.23□□□□□ -2.21
MCCD1P59942 SNORA25.18-201ENST00000607153 114 ntBASIC1.23□□□□□ -2.21
MCCD1P59942 snoU13.31-201ENST00000607291 104 ntBASIC1.23□□□□□ -2.21
MCCD1P59942 RNA5SP517-201ENST00000364724 117 ntBASIC1.22□□□□□ -2.21
MCCD1P59942 RNU6-1187P-201ENST00000364771 110 ntBASIC1.22□□□□□ -2.21
MCCD1P59942 RNU6-392P-201ENST00000364926 101 ntBASIC1.22□□□□□ -2.21
MCCD1P59942 MIR548C-201ENST00000384815 97 ntBASIC1.22□□□□□ -2.21
MCCD1P59942 MIR548AE1-201ENST00000583292 70 ntBASIC1.22□□□□□ -2.21
MCCD1P59942 AC069271.1-201ENST00000445577 156 ntBASIC1.21□□□□□ -2.22
MCCD1P59942 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.2□□□□□ -2.22
MCCD1P59942 MIR4498-201ENST00000577599 66 ntBASIC1.2□□□□□ -2.22
MCCD1P59942 AC211469.2-201ENST00000605461 205 ntBASIC1.2□□□□□ -2.22
MCCD1P59942 MIR140-201ENST00000385282 100 ntBASIC1.19□□□□□ -2.22
MCCD1P59942 AC021146.9-201ENST00000512503 156 ntBASIC1.19□□□□□ -2.22
MCCD1P59942 RNU6-656P-201ENST00000516785 107 ntBASIC1.19□□□□□ -2.22
MCCD1P59942 AC092634.7-201ENST00000621022 103 ntBASIC1.19□□□□□ -2.22
MCCD1P59942 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
MCCD1P59942 MIR608-201ENST00000384820 100 ntBASIC1.18□□□□□ -2.22
MCCD1P59942 RNA5SP458-201ENST00000516188 119 ntBASIC1.18□□□□□ -2.22
MCCD1P59942 RNU6-1162P-201ENST00000384443 104 ntBASIC1.17□□□□□ -2.22
MCCD1P59942 SCARNA17.3-201ENST00000516381 125 ntBASIC1.17□□□□□ -2.22
MCCD1P59942 MIR4511-201ENST00000582784 87 ntBASIC1.17□□□□□ -2.22
MCCD1P59942 uc_338.10-201ENST00000621872 182 ntBASIC1.17□□□□□ -2.22
MCCD1P59942 MIR548V-201ENST00000584165 80 ntBASIC1.16□□□□□ -2.22
MCCD1P59942 MIR6739-201ENST00000622461 75 ntBASIC1.16□□□□□ -2.22
MCCD1P59942 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.16□□□□□ -2.22
MCCD1P59942 AC103706.3-201ENST00000636297 85 ntBASIC1.15□□□□□ -2.23
MCCD1P59942 SNORD114-21-201ENST00000606412 72 ntBASIC1.14□□□□□ -2.23
MCCD1P59942 Y_RNA.327-201ENST00000365201 102 ntBASIC1.13□□□□□ -2.23
MCCD1P59942 Y_RNA.423-201ENST00000384057 113 ntBASIC1.13□□□□□ -2.23
MCCD1P59942 AC103810.9-201ENST00000606688 112 ntBASIC1.13□□□□□ -2.23
MCCD1P59942 MIR582-201ENST00000365731 98 ntBASIC1.12□□□□□ -2.23
MCCD1P59942 MIR1285-1-201ENST00000408593 84 ntBASIC1.12□□□□□ -2.23
MCCD1P59942 AL157398.1-201ENST00000452981 186 ntBASIC1.12□□□□□ -2.23
MCCD1P59942 RNU6-1089P-201ENST00000516473 104 ntBASIC1.12□□□□□ -2.23
MCCD1P59942 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.11□□□□□ -2.23
MCCD1P59942 RNU4-38P-201ENST00000364472 129 ntBASIC1.11□□□□□ -2.23
MCCD1P59942 PSMC1P5-201ENST00000512850 177 ntBASIC1.11□□□□□ -2.23
MCCD1P59942 RNU6-542P-201ENST00000516405 103 ntBASIC1.11□□□□□ -2.23
MCCD1P59942 Y_RNA.250-201ENST00000364542 110 ntBASIC1.1□□□□□ -2.23
MCCD1P59942 MIR521-2-201ENST00000384818 87 ntBASIC1.1□□□□□ -2.23
MCCD1P59942 RNA5SP299-201ENST00000391203 116 ntBASIC1.1□□□□□ -2.23
MCCD1P59942 RNU6-321P-201ENST00000410912 106 ntBASIC1.1□□□□□ -2.23
MCCD1P59942 HMGN2P22-201ENST00000427588 175 ntBASIC1.1□□□□□ -2.23
MCCD1P59942 RNU4-54P-201ENST00000516428 129 ntBASIC1.1□□□□□ -2.23
MCCD1P59942 RNU6-229P-201ENST00000516614 102 ntBASIC1.1□□□□□ -2.23
MCCD1P59942 MIR4295-201ENST00000585286 85 ntBASIC1.1□□□□□ -2.23
MCCD1P59942 SNORA63.6-201ENST00000364921 119 ntBASIC1.09□□□□□ -2.23
MCCD1P59942 SNORA33.1-201ENST00000364957 130 ntBASIC1.09□□□□□ -2.23
MCCD1P59942 Y_RNA.375-201ENST00000365625 101 ntBASIC1.09□□□□□ -2.23
MCCD1P59942 SNORA40.8-201ENST00000411034 126 ntBASIC1.09□□□□□ -2.23
MCCD1P59942 SNORD71-201ENST00000411292 86 ntBASIC1.09□□□□□ -2.23
MCCD1P59942 MIR6078-201ENST00000611069 100 ntBASIC1.09□□□□□ -2.23
MCCD1P59942 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.09□□□□□ -2.23
MCCD1P59942 MIR5706-201ENST00000579841 80 ntBASIC1.08□□□□□ -2.24
MCCD1P59942 SNORD118-201ENST00000363593 134 ntBASIC1.07□□□□□ -2.24
MCCD1P59942 Y_RNA.338-201ENST00000365320 114 ntBASIC1.07□□□□□ -2.24
MCCD1P59942 SNORA2A-201ENST00000383885 135 ntBASIC1.07□□□□□ -2.24
MCCD1P59942 MIR548E-201ENST00000408287 88 ntBASIC1.07□□□□□ -2.24
MCCD1P59942 RPL39P28-201ENST00000465655 155 ntBASIC1.07□□□□□ -2.24
MCCD1P59942 AC087343.1-201ENST00000477341 475 ntBASIC1.07□□□□□ -2.24
MCCD1P59942 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
MCCD1P59942 SNORA15B-2-201ENST00000384058 135 ntBASIC1.06□□□□□ -2.24
MCCD1P59942 SNORA15B-1-201ENST00000384334 135 ntBASIC1.06□□□□□ -2.24
MCCD1P59942 RNU6-1232P-201ENST00000516299 86 ntBASIC1.06□□□□□ -2.24
MCCD1P59942 RNU1-29P-201ENST00000606574 126 ntBASIC1.06□□□□□ -2.24
MCCD1P59942 MIR373-201ENST00000362273 69 ntBASIC1.04□□□□□ -2.24
MCCD1P59942 MIR630-201ENST00000384957 97 ntBASIC1.04□□□□□ -2.24
MCCD1P59942 MIR532-201ENST00000385025 91 ntBASIC1.04□□□□□ -2.24
MCCD1P59942 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
MCCD1P59942 AC110620.1-201ENST00000416042 228 ntBASIC1.04□□□□□ -2.24
MCCD1P59942 U6.96-201ENST00000636425 70 ntBASIC1.04□□□□□ -2.24
MCCD1P59942 MIR6767-201ENST00000637302 66 ntBASIC1.04□□□□□ -2.24
MCCD1P59942 RNA5SP215-201ENST00000363440 122 ntBASIC1.03□□□□□ -2.24
MCCD1P59942 MIR516B1-201ENST00000385211 90 ntBASIC1.03□□□□□ -2.24
MCCD1P59942 TRMT112P2-201ENST00000512910 132 ntBASIC1.03□□□□□ -2.24
MCCD1P59942 MIR4653-201ENST00000585107 83 ntBASIC1.03□□□□□ -2.24
MCCD1P59942 Y_RNA.125-201ENST00000363371 111 ntBASIC1.02□□□□□ -2.25
MCCD1P59942 MIR518A1-201ENST00000385068 85 ntBASIC1.02□□□□□ -2.25
MCCD1P59942 RNU6-1053P-201ENST00000515930 101 ntBASIC1.02□□□□□ -2.25
MCCD1P59942 RNU6-110P-201ENST00000384508 104 ntBASIC1.01□□□□□ -2.25
MCCD1P59942 Y_RNA.633-201ENST00000459107 95 ntBASIC1.01□□□□□ -2.25
MCCD1P59942 AL590095.2-201ENST00000604136 117 ntBASIC1.01□□□□□ -2.25
MCCD1P59942 RNA5SP192-201ENST00000364404 120 ntBASIC1□□□□□ -2.25
MCCD1P59942 MIR6857-201ENST00000613267 93 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 181 ms