Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 RNA5SP102-201ENST00000516865 106 ntBASIC1.21□□□□□ -2.22
RFC5P40937 MIR3657-201ENST00000584818 117 ntBASIC1.21□□□□□ -2.22
RFC5P40937 MIR6504-201ENST00000613520 61 ntBASIC1.21□□□□□ -2.22
RFC5P40937 RNA5SP517-201ENST00000364724 117 ntBASIC1.2□□□□□ -2.22
RFC5P40937 MIR1276-201ENST00000408707 83 ntBASIC1.2□□□□□ -2.22
RFC5P40937 ACA64.5-201ENST00000516207 127 ntBASIC1.2□□□□□ -2.22
RFC5P40937 RNY1P8-201ENST00000383970 114 ntBASIC1.19□□□□□ -2.22
RFC5P40937 AC018659.1-201ENST00000551083 169 ntBASIC1.19□□□□□ -2.22
RFC5P40937 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.19□□□□□ -2.22
RFC5P40937 SNORD113.1-201ENST00000363280 73 ntBASIC1.18□□□□□ -2.22
RFC5P40937 Y_RNA.407-201ENST00000383986 113 ntBASIC1.18□□□□□ -2.22
RFC5P40937 AC211469.2-201ENST00000605461 205 ntBASIC1.18□□□□□ -2.22
RFC5P40937 SNORA2.1-201ENST00000363089 137 ntBASIC1.17□□□□□ -2.22
RFC5P40937 SNORD71-201ENST00000411292 86 ntBASIC1.17□□□□□ -2.22
RFC5P40937 RNU6-1216P-201ENST00000362590 107 ntBASIC1.16□□□□□ -2.22
RFC5P40937 SNORA40.8-201ENST00000411034 126 ntBASIC1.16□□□□□ -2.22
RFC5P40937 MIR5706-201ENST00000579841 80 ntBASIC1.16□□□□□ -2.22
RFC5P40937 U6.111-201ENST00000636093 83 ntBASIC1.16□□□□□ -2.22
RFC5P40937 SNORD114-21-201ENST00000606412 72 ntBASIC1.15□□□□□ -2.23
RFC5P40937 MTND4LP1-201ENST00000446263 157 ntBASIC1.14□□□□□ -2.23
RFC5P40937 MIR4473-201ENST00000583731 91 ntBASIC1.14□□□□□ -2.23
RFC5P40937 AL590095.2-201ENST00000604136 117 ntBASIC1.13□□□□□ -2.23
RFC5P40937 SNORA25.18-201ENST00000607153 114 ntBASIC1.13□□□□□ -2.23
RFC5P40937 MIR96-201ENST00000362288 78 ntBASIC1.12□□□□□ -2.23
RFC5P40937 SNORD118-201ENST00000363593 134 ntBASIC1.12□□□□□ -2.23
RFC5P40937 Y_RNA.224-201ENST00000364308 111 ntBASIC1.12□□□□□ -2.23
RFC5P40937 RNU4-38P-201ENST00000364472 129 ntBASIC1.12□□□□□ -2.23
RFC5P40937 Y_RNA.250-201ENST00000364542 110 ntBASIC1.12□□□□□ -2.23
RFC5P40937 PSMC1P5-201ENST00000512850 177 ntBASIC1.12□□□□□ -2.23
RFC5P40937 MIR4452-201ENST00000583004 71 ntBASIC1.12□□□□□ -2.23
RFC5P40937 SNORA70.25-201ENST00000612741 95 ntBASIC1.12□□□□□ -2.23
RFC5P40937 SNORD114-27-201ENST00000363766 70 ntBASIC1.11□□□□□ -2.23
RFC5P40937 RNU6-990P-201ENST00000364385 104 ntBASIC1.11□□□□□ -2.23
RFC5P40937 AC069271.1-201ENST00000445577 156 ntBASIC1.11□□□□□ -2.23
RFC5P40937 MIR4752-201ENST00000579672 72 ntBASIC1.11□□□□□ -2.23
RFC5P40937 U7.6-201ENST00000610841 64 ntBASIC1.11□□□□□ -2.23
RFC5P40937 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
RFC5P40937 RNU1-93P-201ENST00000364704 169 ntBASIC1.1□□□□□ -2.23
RFC5P40937 RNU6-800P-201ENST00000384473 103 ntBASIC1.1□□□□□ -2.23
RFC5P40937 SCARNA17.3-201ENST00000516381 125 ntBASIC1.1□□□□□ -2.23
RFC5P40937 uc_338.10-201ENST00000621872 182 ntBASIC1.1□□□□□ -2.23
RFC5P40937 MIR6767-201ENST00000637302 66 ntBASIC1.09□□□□□ -2.23
RFC5P40937 MIR652-201ENST00000385278 98 ntBASIC1.08□□□□□ -2.24
RFC5P40937 RNU6-630P-201ENST00000391258 106 ntBASIC1.08□□□□□ -2.24
RFC5P40937 AC125388.1-201ENST00000459631 156 ntBASIC1.08□□□□□ -2.24
RFC5P40937 RNA5SP147-201ENST00000516493 109 ntBASIC1.08□□□□□ -2.24
RFC5P40937 SNORD114-22-201ENST00000365423 72 ntBASIC1.07□□□□□ -2.24
RFC5P40937 SNORA2A-201ENST00000383885 135 ntBASIC1.07□□□□□ -2.24
RFC5P40937 MIR518A1-201ENST00000385068 85 ntBASIC1.07□□□□□ -2.24
RFC5P40937 RNU6-982P-201ENST00000516216 102 ntBASIC1.07□□□□□ -2.24
RFC5P40937 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
RFC5P40937 SNORA25.4-201ENST00000363666 124 ntBASIC1.06□□□□□ -2.24
RFC5P40937 RNU6-668P-201ENST00000364180 107 ntBASIC1.06□□□□□ -2.24
RFC5P40937 Y_RNA.443-201ENST00000384135 111 ntBASIC1.06□□□□□ -2.24
RFC5P40937 MIR532-201ENST00000385025 91 ntBASIC1.06□□□□□ -2.24
RFC5P40937 snoU13.18-201ENST00000459483 104 ntBASIC1.06□□□□□ -2.24
RFC5P40937 RNA5SP220-201ENST00000516298 104 ntBASIC1.06□□□□□ -2.24
RFC5P40937 AC103810.9-201ENST00000606688 112 ntBASIC1.06□□□□□ -2.24
RFC5P40937 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
RFC5P40937 RNU6-645P-201ENST00000364649 106 ntBASIC1.05□□□□□ -2.24
RFC5P40937 Y_RNA.355-201ENST00000365462 98 ntBASIC1.05□□□□□ -2.24
RFC5P40937 RNU6-229P-201ENST00000516614 102 ntBASIC1.05□□□□□ -2.24
RFC5P40937 MIR548AE1-201ENST00000583292 70 ntBASIC1.05□□□□□ -2.24
RFC5P40937 MIR6739-201ENST00000622461 75 ntBASIC1.05□□□□□ -2.24
RFC5P40937 RNU6-1162P-201ENST00000384443 104 ntBASIC1.04□□□□□ -2.24
RFC5P40937 SNORD116-24-201ENST00000384549 92 ntBASIC1.04□□□□□ -2.24
RFC5P40937 RNU6-848P-201ENST00000515948 107 ntBASIC1.04□□□□□ -2.24
RFC5P40937 RNU6-617P-201ENST00000516147 107 ntBASIC1.04□□□□□ -2.24
RFC5P40937 RNU6-473P-201ENST00000516164 107 ntBASIC1.04□□□□□ -2.24
RFC5P40937 RNU6-1049P-201ENST00000516414 107 ntBASIC1.04□□□□□ -2.24
RFC5P40937 MIR6857-201ENST00000613267 93 ntBASIC1.04□□□□□ -2.24
RFC5P40937 RNU6-1187P-201ENST00000364771 110 ntBASIC1.03□□□□□ -2.24
RFC5P40937 Y_RNA.340-201ENST00000365330 92 ntBASIC1.03□□□□□ -2.24
RFC5P40937 AC021146.9-201ENST00000512503 156 ntBASIC1.03□□□□□ -2.24
RFC5P40937 SNORA40.17-201ENST00000517256 115 ntBASIC1.03□□□□□ -2.24
RFC5P40937 AC005520.4-201ENST00000604337 90 ntBASIC1.03□□□□□ -2.24
RFC5P40937 RNU1-29P-201ENST00000606574 126 ntBASIC1.03□□□□□ -2.24
RFC5P40937 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
RFC5P40937 Y_RNA.125-201ENST00000363371 111 ntBASIC1.02□□□□□ -2.25
RFC5P40937 RNU6-42P-201ENST00000384165 107 ntBASIC1.02□□□□□ -2.25
RFC5P40937 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
RFC5P40937 HMGN2P22-201ENST00000427588 175 ntBASIC1.02□□□□□ -2.25
RFC5P40937 Y_RNA.423-201ENST00000384057 113 ntBASIC1.01□□□□□ -2.25
RFC5P40937 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
RFC5P40937 MIR373-201ENST00000362273 69 ntBASIC1□□□□□ -2.25
RFC5P40937 Y_RNA.118-201ENST00000363300 101 ntBASIC1□□□□□ -2.25
RFC5P40937 SNORA63.6-201ENST00000364921 119 ntBASIC1□□□□□ -2.25
RFC5P40937 Y_RNA.386-201ENST00000383913 105 ntBASIC1□□□□□ -2.25
RFC5P40937 SNORA15B-2-201ENST00000384058 135 ntBASIC1□□□□□ -2.25
RFC5P40937 SNORA15B-1-201ENST00000384334 135 ntBASIC1□□□□□ -2.25
RFC5P40937 MIR520E-201ENST00000384867 87 ntBASIC1□□□□□ -2.25
RFC5P40937 AC098934.3-201ENST00000430450 190 ntBASIC1□□□□□ -2.25
RFC5P40937 MIR3973-201ENST00000579824 107 ntBASIC0.99□□□□□ -2.25
RFC5P40937 MIR521-2-201ENST00000384818 87 ntBASIC0.98□□□□□ -2.25
RFC5P40937 RNU6-863P-201ENST00000515989 104 ntBASIC0.98□□□□□ -2.25
RFC5P40937 RNU4-54P-201ENST00000516428 129 ntBASIC0.98□□□□□ -2.25
RFC5P40937 MIR4653-201ENST00000585107 83 ntBASIC0.98□□□□□ -2.25
RFC5P40937 MIR20A-201ENST00000362279 71 ntBASIC0.97□□□□□ -2.25
RFC5P40937 RNU6-471P-201ENST00000383944 106 ntBASIC0.97□□□□□ -2.25
RFC5P40937 RPL39P28-201ENST00000465655 155 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 169.8 ms