Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 MIR548Z-201ENST00000584743 97 ntBASIC-0.77□□□□□ -2.53
SHMT2P34897 MIR147A-201ENST00000385079 72 ntBASIC-0.78□□□□□ -2.53
SHMT2P34897 RNA5SP292-201ENST00000390974 118 ntBASIC-0.78□□□□□ -2.53
SHMT2P34897 RNU6-257P-201ENST00000410238 98 ntBASIC-0.78□□□□□ -2.53
SHMT2P34897 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.79□□□□□ -2.54
SHMT2P34897 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.79□□□□□ -2.54
SHMT2P34897 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.79□□□□□ -2.54
SHMT2P34897 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.79□□□□□ -2.54
SHMT2P34897 RNU7-24P-201ENST00000458867 62 ntBASIC-0.79□□□□□ -2.54
SHMT2P34897 RNU7-107P-201ENST00000459121 61 ntBASIC-0.79□□□□□ -2.54
SHMT2P34897 AC068339.1-201ENST00000526965 141 ntBASIC-0.79□□□□□ -2.54
SHMT2P34897 YWHAEP3-201ENST00000582767 121 ntBASIC-0.79□□□□□ -2.54
SHMT2P34897 MIR4439-201ENST00000583746 80 ntBASIC-0.79□□□□□ -2.54
SHMT2P34897 AC104996.3-201ENST00000590718 94 ntBASIC-0.79□□□□□ -2.54
SHMT2P34897 AC108676.2-201ENST00000605225 163 ntBASIC-0.79□□□□□ -2.54
SHMT2P34897 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.79□□□□□ -2.54
SHMT2P34897 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.8□□□□□ -2.54
SHMT2P34897 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.8□□□□□ -2.54
SHMT2P34897 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.8□□□□□ -2.54
SHMT2P34897 SNORD75.2-201ENST00000408784 58 ntBASIC-0.8□□□□□ -2.54
SHMT2P34897 AC103810.7-201ENST00000607821 91 ntBASIC-0.8□□□□□ -2.54
SHMT2P34897 MIR6888-201ENST00000621977 67 ntBASIC-0.8□□□□□ -2.54
SHMT2P34897 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.81□□□□□ -2.54
SHMT2P34897 RNY1P7-201ENST00000384743 110 ntBASIC-0.81□□□□□ -2.54
SHMT2P34897 MIR124-2-201ENST00000385081 109 ntBASIC-0.81□□□□□ -2.54
SHMT2P34897 RNA5SP395-201ENST00000516567 118 ntBASIC-0.81□□□□□ -2.54
SHMT2P34897 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.81□□□□□ -2.54
SHMT2P34897 MIR4777-201ENST00000583710 86 ntBASIC-0.81□□□□□ -2.54
SHMT2P34897 MIR382-201ENST00000637119 76 ntBASIC-0.81□□□□□ -2.54
SHMT2P34897 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.82□□□□□ -2.54
SHMT2P34897 SNORD45B-201ENST00000364617 72 ntBASIC-0.82□□□□□ -2.54
SHMT2P34897 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.82□□□□□ -2.54
SHMT2P34897 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.82□□□□□ -2.54
SHMT2P34897 MT-TQ-201ENST00000387372 72 ntBASIC-0.82□□□□□ -2.54
SHMT2P34897 RNU6-644P-201ENST00000391155 98 ntBASIC-0.82□□□□□ -2.54
SHMT2P34897 snoU13.17-201ENST00000458802 104 ntBASIC-0.82□□□□□ -2.54
SHMT2P34897 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.82□□□□□ -2.54
SHMT2P34897 AC021146.9-201ENST00000512503 156 ntBASIC-0.82□□□□□ -2.54
SHMT2P34897 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.82□□□□□ -2.54
SHMT2P34897 MIR4499-201ENST00000584834 69 ntBASIC-0.82□□□□□ -2.54
SHMT2P34897 snoR1.1-201ENST00000628177 80 ntBASIC-0.82□□□□□ -2.54
SHMT2P34897 RNU6-824P-201ENST00000363724 104 ntBASIC-0.83□□□□□ -2.54
SHMT2P34897 RNU6-382P-201ENST00000365181 106 ntBASIC-0.83□□□□□ -2.54
SHMT2P34897 RNU6-813P-201ENST00000384691 107 ntBASIC-0.83□□□□□ -2.54
SHMT2P34897 MIR548A1-201ENST00000385041 97 ntBASIC-0.83□□□□□ -2.54
SHMT2P34897 SCARNA18B-201ENST00000458806 135 ntBASIC-0.83□□□□□ -2.54
SHMT2P34897 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.83□□□□□ -2.54
SHMT2P34897 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.83□□□□□ -2.54
SHMT2P34897 MIR5009-201ENST00000578736 100 ntBASIC-0.83□□□□□ -2.54
SHMT2P34897 AL445584.3-201ENST00000617173 78 ntBASIC-0.83□□□□□ -2.54
SHMT2P34897 MIR3914-2-201ENST00000637339 95 ntBASIC-0.83□□□□□ -2.54
SHMT2P34897 RNU6-208P-201ENST00000362431 107 ntBASIC-0.84□□□□□ -2.54
SHMT2P34897 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.84□□□□□ -2.54
SHMT2P34897 SNORD114-17-201ENST00000364699 75 ntBASIC-0.84□□□□□ -2.54
SHMT2P34897 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.84□□□□□ -2.54
SHMT2P34897 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.84□□□□□ -2.54
SHMT2P34897 SNORD83B-201ENST00000386745 93 ntBASIC-0.84□□□□□ -2.54
SHMT2P34897 MIR1265-201ENST00000408444 86 ntBASIC-0.84□□□□□ -2.54
SHMT2P34897 SNORD18.2-201ENST00000459604 70 ntBASIC-0.84□□□□□ -2.54
SHMT2P34897 SNORD33.1-201ENST00000516213 88 ntBASIC-0.84□□□□□ -2.54
SHMT2P34897 SNORA18.5-201ENST00000516616 101 ntBASIC-0.84□□□□□ -2.54
SHMT2P34897 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.84□□□□□ -2.54
SHMT2P34897 AL353803.5-201ENST00000599815 141 ntBASIC-0.84□□□□□ -2.54
SHMT2P34897 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.85□□□□□ -2.55
SHMT2P34897 SNORA33.1-201ENST00000364957 130 ntBASIC-0.85□□□□□ -2.55
SHMT2P34897 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.85□□□□□ -2.55
SHMT2P34897 MIR548U-201ENST00000390728 81 ntBASIC-0.85□□□□□ -2.55
SHMT2P34897 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.85□□□□□ -2.55
SHMT2P34897 RNU6-62P-201ENST00000516526 102 ntBASIC-0.85□□□□□ -2.55
SHMT2P34897 RNU6-971P-201ENST00000516920 106 ntBASIC-0.85□□□□□ -2.55
SHMT2P34897 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.85□□□□□ -2.55
SHMT2P34897 AC012531.4-201ENST00000616509 177 ntBASIC-0.85□□□□□ -2.55
SHMT2P34897 U6.96-201ENST00000636425 70 ntBASIC-0.85□□□□□ -2.55
SHMT2P34897 SNORA62.4-201ENST00000365504 151 ntBASIC-0.86□□□□□ -2.55
SHMT2P34897 RNU6-260P-201ENST00000384092 107 ntBASIC-0.86□□□□□ -2.55
SHMT2P34897 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.86□□□□□ -2.55
SHMT2P34897 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.86□□□□□ -2.55
SHMT2P34897 SCARNA17-201ENST00000516183 144 ntBASIC-0.86□□□□□ -2.55
SHMT2P34897 RNU6-795P-201ENST00000516323 103 ntBASIC-0.86□□□□□ -2.55
SHMT2P34897 RNY1P5-201ENST00000383890 115 ntBASIC-0.87□□□□□ -2.55
SHMT2P34897 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.87□□□□□ -2.55
SHMT2P34897 MIR203A-201ENST00000384836 110 ntBASIC-0.87□□□□□ -2.55
SHMT2P34897 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.87□□□□□ -2.55
SHMT2P34897 RNU6-346P-201ENST00000516288 111 ntBASIC-0.87□□□□□ -2.55
SHMT2P34897 RNA5SP147-201ENST00000516493 109 ntBASIC-0.87□□□□□ -2.55
SHMT2P34897 RNU6-255P-201ENST00000516957 105 ntBASIC-0.87□□□□□ -2.55
SHMT2P34897 uc_338.19-201ENST00000616808 99 ntBASIC-0.87□□□□□ -2.55
SHMT2P34897 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.88□□□□□ -2.55
SHMT2P34897 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.88□□□□□ -2.55
SHMT2P34897 RNU6-80P-201ENST00000384195 107 ntBASIC-0.89□□□□□ -2.55
SHMT2P34897 MIR1255B2-201ENST00000408618 67 ntBASIC-0.89□□□□□ -2.55
SHMT2P34897 RNU6-519P-201ENST00000410590 108 ntBASIC-0.89□□□□□ -2.55
SHMT2P34897 SNORA19.1-201ENST00000410656 129 ntBASIC-0.89□□□□□ -2.55
SHMT2P34897 AC140658.3-201ENST00000567603 271 ntBASIC-0.89□□□□□ -2.55
SHMT2P34897 MIR3657-201ENST00000584818 117 ntBASIC-0.89□□□□□ -2.55
SHMT2P34897 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.9□□□□□ -2.55
SHMT2P34897 MIR548I1-201ENST00000408810 149 ntBASIC-0.9□□□□□ -2.55
SHMT2P34897 RNA5SP25-201ENST00000410815 110 ntBASIC-0.9□□□□□ -2.55
SHMT2P34897 AC026421.1-201ENST00000519101 163 ntBASIC-0.9□□□□□ -2.55
SHMT2P34897 CYP3A54P-201ENST00000566950 75 ntBASIC-0.9□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 218.5 ms