Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 MIR203A-201ENST00000384836 110 ntBASIC-2.96□□□□□ -2.88
TPM1P09493 MTATP6P29-201ENST00000415057 132 ntBASIC-2.96□□□□□ -2.88
TPM1P09493 AC020661.2-201ENST00000560114 134 ntBASIC-2.96□□□□□ -2.88
TPM1P09493 MIR3657-201ENST00000584818 117 ntBASIC-2.96□□□□□ -2.88
TPM1P09493 RNU6-1020P-201ENST00000363684 107 ntBASIC-2.97□□□□□ -2.88
TPM1P09493 Y_RNA.460-201ENST00000384255 102 ntBASIC-2.97□□□□□ -2.88
TPM1P09493 Y_RNA.509-201ENST00000384506 99 ntBASIC-2.97□□□□□ -2.88
TPM1P09493 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-2.97□□□□□ -2.88
TPM1P09493 RNU6-644P-201ENST00000391155 98 ntBASIC-2.97□□□□□ -2.88
TPM1P09493 RNU7-197P-201ENST00000458836 62 ntBASIC-2.97□□□□□ -2.88
TPM1P09493 RNA5SP180-201ENST00000516181 101 ntBASIC-2.97□□□□□ -2.88
TPM1P09493 RNU4-71P-201ENST00000516258 113 ntBASIC-2.97□□□□□ -2.88
TPM1P09493 MIR4439-201ENST00000583746 80 ntBASIC-2.97□□□□□ -2.88
TPM1P09493 MIR548Z-201ENST00000584743 97 ntBASIC-2.97□□□□□ -2.88
TPM1P09493 FAS-AS1.1-201ENST00000615327 126 ntBASIC-2.97□□□□□ -2.88
TPM1P09493 MIR4773-1-201ENST00000637203 78 ntBASIC-2.97□□□□□ -2.88
TPM1P09493 Y_RNA.20-201ENST00000362479 113 ntBASIC-2.98□□□□□ -2.89
TPM1P09493 Y_RNA.233-201ENST00000364407 101 ntBASIC-2.98□□□□□ -2.89
TPM1P09493 Y_RNA.558-201ENST00000384685 113 ntBASIC-2.98□□□□□ -2.89
TPM1P09493 Y_RNA.574-201ENST00000384766 95 ntBASIC-2.98□□□□□ -2.89
TPM1P09493 RNU6-460P-201ENST00000391158 108 ntBASIC-2.99□□□□□ -2.89
TPM1P09493 RNU6-832P-201ENST00000363319 107 ntBASIC-3□□□□□ -2.89
TPM1P09493 Y_RNA.348-201ENST00000365403 103 ntBASIC-3□□□□□ -2.89
TPM1P09493 SNORD90-201ENST00000391145 111 ntBASIC-3□□□□□ -2.89
TPM1P09493 RNA5SP266-201ENST00000410273 108 ntBASIC-3□□□□□ -2.89
TPM1P09493 MTATP8P1-201ENST00000467115 207 ntBASIC-3□□□□□ -2.89
TPM1P09493 RNU6-1238P-201ENST00000517215 102 ntBASIC-3□□□□□ -2.89
TPM1P09493 MIR521-2-201ENST00000384818 87 ntBASIC-3.01□□□□□ -2.89
TPM1P09493 RNA5SP86-201ENST00000390869 98 ntBASIC-3.01□□□□□ -2.89
TPM1P09493 RNA5SP292-201ENST00000390974 118 ntBASIC-3.01□□□□□ -2.89
TPM1P09493 AP002795.1-201ENST00000534879 84 ntBASIC-3.01□□□□□ -2.89
TPM1P09493 MIR4490-201ENST00000582647 84 ntBASIC-3.01□□□□□ -2.89
TPM1P09493 RNU4-11P-201ENST00000365287 132 ntBASIC-3.02□□□□□ -2.89
TPM1P09493 MIR519A2-201ENST00000384990 87 ntBASIC-3.02□□□□□ -2.89
TPM1P09493 RNU6-732P-201ENST00000516033 103 ntBASIC-3.02□□□□□ -2.89
TPM1P09493 MIR1246-201ENST00000636535 73 ntBASIC-3.02□□□□□ -2.89
TPM1P09493 RNU6-824P-201ENST00000363724 104 ntBASIC-3.03□□□□□ -2.89
TPM1P09493 Y_RNA.288-201ENST00000364854 92 ntBASIC-3.03□□□□□ -2.89
TPM1P09493 MIR548S-201ENST00000581352 82 ntBASIC-3.03□□□□□ -2.89
TPM1P09493 MIR548I1-201ENST00000408810 149 ntBASIC-3.04□□□□□ -2.9
TPM1P09493 RNU6-519P-201ENST00000410590 108 ntBASIC-3.04□□□□□ -2.9
TPM1P09493 AL691482.2-201ENST00000457453 84 ntBASIC-3.04□□□□□ -2.9
TPM1P09493 RNU6-781P-201ENST00000516377 101 ntBASIC-3.04□□□□□ -2.9
TPM1P09493 SNORA18.5-201ENST00000516616 101 ntBASIC-3.04□□□□□ -2.9
TPM1P09493 MIR5683-201ENST00000636514 76 ntBASIC-3.04□□□□□ -2.9
TPM1P09493 RNU5F-1-201ENST00000362507 117 ntBASIC-3.05□□□□□ -2.9
TPM1P09493 RNY3P2-201ENST00000362918 102 ntBASIC-3.05□□□□□ -2.9
TPM1P09493 RNU6-151P-201ENST00000364158 107 ntBASIC-3.05□□□□□ -2.9
TPM1P09493 MIR548H1-201ENST00000408610 102 ntBASIC-3.05□□□□□ -2.9
TPM1P09493 RNU6-168P-201ENST00000516189 101 ntBASIC-3.06□□□□□ -2.9
TPM1P09493 RNU6-1153P-201ENST00000516760 105 ntBASIC-3.06□□□□□ -2.9
TPM1P09493 Y_RNA.309-201ENST00000365046 111 ntBASIC-3.07□□□□□ -2.9
TPM1P09493 RNU6-518P-201ENST00000516056 96 ntBASIC-3.07□□□□□ -2.9
TPM1P09493 AC103810.7-201ENST00000607821 91 ntBASIC-3.07□□□□□ -2.9
TPM1P09493 Y_RNA.478-201ENST00000384358 107 ntBASIC-3.08□□□□□ -2.9
TPM1P09493 RNU6-813P-201ENST00000384691 107 ntBASIC-3.08□□□□□ -2.9
TPM1P09493 RPL35AP4-201ENST00000412007 102 ntBASIC-3.08□□□□□ -2.9
TPM1P09493 AL158147.1-201ENST00000443970 75 ntBASIC-3.08□□□□□ -2.9
TPM1P09493 AC090616.4-201ENST00000448026 115 ntBASIC-3.08□□□□□ -2.9
TPM1P09493 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-3.08□□□□□ -2.9
TPM1P09493 Y_RNA.181-201ENST00000363872 101 ntBASIC-3.09□□□□□ -2.9
TPM1P09493 SNORD45B-201ENST00000364617 72 ntBASIC-3.09□□□□□ -2.9
TPM1P09493 SNORD19-201ENST00000391191 68 ntBASIC-3.09□□□□□ -2.9
TPM1P09493 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-3.09□□□□□ -2.9
TPM1P09493 AC022559.1-201ENST00000520905 205 ntBASIC-3.09□□□□□ -2.9
TPM1P09493 Y_RNA.200-201ENST00000364018 102 ntBASIC-3.11□□□□□ -2.91
TPM1P09493 Y_RNA.232-201ENST00000364369 96 ntBASIC-3.11□□□□□ -2.91
TPM1P09493 MIR1285-2-201ENST00000408311 88 ntBASIC-3.11□□□□□ -2.91
TPM1P09493 SNORA19.1-201ENST00000410656 129 ntBASIC-3.11□□□□□ -2.91
TPM1P09493 AL021921.1-201ENST00000442774 93 ntBASIC-3.11□□□□□ -2.91
TPM1P09493 AP001340.1-201ENST00000624405 217 ntBASIC-3.11□□□□□ -2.91
TPM1P09493 RNU6-1135P-201ENST00000411083 103 ntBASIC-3.12□□□□□ -2.91
TPM1P09493 MTND3P2-201ENST00000438452 342 ntBASIC-3.12□□□□□ -2.91
TPM1P09493 AC025166.1-201ENST00000612411 163 ntBASIC-3.12□□□□□ -2.91
TPM1P09493 Y_RNA.95-201ENST00000363079 95 ntBASIC-3.13□□□□□ -2.91
TPM1P09493 RNU6-400P-201ENST00000391173 106 ntBASIC-3.13□□□□□ -2.91
TPM1P09493 MIR3613-201ENST00000579844 87 ntBASIC-3.13□□□□□ -2.91
TPM1P09493 MIR6739-201ENST00000622461 75 ntBASIC-3.13□□□□□ -2.91
TPM1P09493 Y_RNA.188-201ENST00000363952 111 ntBASIC-3.14□□□□□ -2.91
TPM1P09493 RNU6-704P-201ENST00000364162 103 ntBASIC-3.14□□□□□ -2.91
TPM1P09493 RNU7-88P-201ENST00000458752 63 ntBASIC-3.14□□□□□ -2.91
TPM1P09493 RNU6-774P-201ENST00000363238 107 ntBASIC-3.15□□□□□ -2.91
TPM1P09493 MIR548F4-201ENST00000408515 105 ntBASIC-3.15□□□□□ -2.91
TPM1P09493 U6.81-201ENST00000612550 106 ntBASIC-3.15□□□□□ -2.91
TPM1P09493 AC072026.1-201ENST00000605023 201 ntBASIC-3.16□□□□□ -2.92
TPM1P09493 SNORD115-27-201ENST00000364430 82 ntBASIC-3.17□□□□□ -2.92
TPM1P09493 Y_RNA.457-201ENST00000384237 111 ntBASIC-3.17□□□□□ -2.92
TPM1P09493 RNY3P14-201ENST00000384309 102 ntBASIC-3.17□□□□□ -2.92
TPM1P09493 Y_RNA.720-201ENST00000517166 92 ntBASIC-3.17□□□□□ -2.92
TPM1P09493 U7.5-201ENST00000517224 61 ntBASIC-3.17□□□□□ -2.92
TPM1P09493 Y_RNA.467-201ENST00000384297 102 ntBASIC-3.18□□□□□ -2.92
TPM1P09493 MIR513C-201ENST00000401352 84 ntBASIC-3.18□□□□□ -2.92
TPM1P09493 AC018880.2-201ENST00000414265 201 ntBASIC-3.18□□□□□ -2.92
TPM1P09493 SNORA81.3-201ENST00000517283 198 ntBASIC-3.18□□□□□ -2.92
TPM1P09493 Y_RNA.442-201ENST00000384131 102 ntBASIC-3.19□□□□□ -2.92
TPM1P09493 Y_RNA.678-201ENST00000516408 96 ntBASIC-3.19□□□□□ -2.92
TPM1P09493 DLEU2_3.2-201ENST00000612883 73 ntBASIC-3.19□□□□□ -2.92
TPM1P09493 AC141273.2-201ENST00000618989 130 ntBASIC-3.19□□□□□ -2.92
TPM1P09493 SNORD18.1-201ENST00000363807 70 ntBASIC-3.2□□□□□ -2.92
TPM1P09493 Y_RNA.350-201ENST00000365409 98 ntBASIC-3.2□□□□□ -2.92
Retrieved 100 of 98,524 protein–RNA pairs in 352.9 ms