Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 RNU6-635P-201ENST00000516651 102 ntBASIC-1.78□□□□□ -2.69
CTSDP07339 Y_RNA.702-201ENST00000516843 96 ntBASIC-1.78□□□□□ -2.69
CTSDP07339 RNY4P6-201ENST00000363667 96 ntBASIC-1.79□□□□□ -2.7
CTSDP07339 RNU6-80P-201ENST00000384195 107 ntBASIC-1.79□□□□□ -2.7
CTSDP07339 RNU7-154P-201ENST00000516194 62 ntBASIC-1.79□□□□□ -2.7
CTSDP07339 RNA5SP147-201ENST00000516493 109 ntBASIC-1.79□□□□□ -2.7
CTSDP07339 AP002795.1-201ENST00000534879 84 ntBASIC-1.79□□□□□ -2.7
CTSDP07339 AL160413.1-201ENST00000622780 310 ntBASIC-1.79□□□□□ -2.7
CTSDP07339 Y_RNA.216-201ENST00000364205 93 ntBASIC-1.8□□□□□ -2.7
CTSDP07339 RNU4-40P-201ENST00000364351 143 ntBASIC-1.8□□□□□ -2.7
CTSDP07339 RNU6-382P-201ENST00000365181 106 ntBASIC-1.8□□□□□ -2.7
CTSDP07339 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.8□□□□□ -2.7
CTSDP07339 RNU6-540P-201ENST00000384622 101 ntBASIC-1.8□□□□□ -2.7
CTSDP07339 SNORD90-201ENST00000391145 111 ntBASIC-1.8□□□□□ -2.7
CTSDP07339 SNORD58.1-201ENST00000391313 66 ntBASIC-1.8□□□□□ -2.7
CTSDP07339 RNU6-62P-201ENST00000516526 102 ntBASIC-1.8□□□□□ -2.7
CTSDP07339 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.8□□□□□ -2.7
CTSDP07339 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.81□□□□□ -2.7
CTSDP07339 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.81□□□□□ -2.7
CTSDP07339 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.81□□□□□ -2.7
CTSDP07339 RNA5SP86-201ENST00000390869 98 ntBASIC-1.81□□□□□ -2.7
CTSDP07339 RPL35AP4-201ENST00000412007 102 ntBASIC-1.81□□□□□ -2.7
CTSDP07339 RNU6-983P-201ENST00000516004 103 ntBASIC-1.81□□□□□ -2.7
CTSDP07339 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.81□□□□□ -2.7
CTSDP07339 RNU6-238P-201ENST00000363313 106 ntBASIC-1.82□□□□□ -2.7
CTSDP07339 MIR577-201ENST00000385196 96 ntBASIC-1.82□□□□□ -2.7
CTSDP07339 MIR548H1-201ENST00000408610 102 ntBASIC-1.82□□□□□ -2.7
CTSDP07339 RNU2-38P-201ENST00000410856 79 ntBASIC-1.82□□□□□ -2.7
CTSDP07339 MIR3171-201ENST00000584270 74 ntBASIC-1.82□□□□□ -2.7
CTSDP07339 MIR6509-201ENST00000614603 85 ntBASIC-1.82□□□□□ -2.7
CTSDP07339 RNY4P27-201ENST00000363341 96 ntBASIC-1.83□□□□□ -2.7
CTSDP07339 RNU6-915P-201ENST00000364943 103 ntBASIC-1.83□□□□□ -2.7
CTSDP07339 MTATP6P29-201ENST00000415057 132 ntBASIC-1.83□□□□□ -2.7
CTSDP07339 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.83□□□□□ -2.7
CTSDP07339 SNORD4B-201ENST00000459083 72 ntBASIC-1.83□□□□□ -2.7
CTSDP07339 RNU6-732P-201ENST00000516033 103 ntBASIC-1.83□□□□□ -2.7
CTSDP07339 RNU6-1219P-201ENST00000516143 112 ntBASIC-1.83□□□□□ -2.7
CTSDP07339 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.83□□□□□ -2.7
CTSDP07339 MIR4694-201ENST00000578534 80 ntBASIC-1.83□□□□□ -2.7
CTSDP07339 MIR3657-201ENST00000584818 117 ntBASIC-1.83□□□□□ -2.7
CTSDP07339 Y_RNA.804-201ENST00000615262 101 ntBASIC-1.83□□□□□ -2.7
CTSDP07339 Y_RNA.202-201ENST00000364083 110 ntBASIC-1.84□□□□□ -2.7
CTSDP07339 RNU6-151P-201ENST00000364158 107 ntBASIC-1.84□□□□□ -2.7
CTSDP07339 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.84□□□□□ -2.7
CTSDP07339 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.84□□□□□ -2.7
CTSDP07339 MIR203A-201ENST00000384836 110 ntBASIC-1.84□□□□□ -2.7
CTSDP07339 RNU6-644P-201ENST00000391155 98 ntBASIC-1.84□□□□□ -2.7
CTSDP07339 AC090616.4-201ENST00000448026 115 ntBASIC-1.84□□□□□ -2.7
CTSDP07339 MIR4490-201ENST00000582647 84 ntBASIC-1.84□□□□□ -2.7
CTSDP07339 MIR4439-201ENST00000583746 80 ntBASIC-1.84□□□□□ -2.7
CTSDP07339 MIR548Z-201ENST00000584743 97 ntBASIC-1.84□□□□□ -2.7
CTSDP07339 MIR5683-201ENST00000636514 76 ntBASIC-1.84□□□□□ -2.7
CTSDP07339 MIR4773-1-201ENST00000637203 78 ntBASIC-1.84□□□□□ -2.7
CTSDP07339 Y_RNA.138-201ENST00000363462 102 ntBASIC-1.85□□□□□ -2.71
CTSDP07339 RNU6-1020P-201ENST00000363684 107 ntBASIC-1.85□□□□□ -2.71
CTSDP07339 Y_RNA.396-201ENST00000383949 103 ntBASIC-1.85□□□□□ -2.71
CTSDP07339 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.85□□□□□ -2.71
CTSDP07339 RNU6-168P-201ENST00000516189 101 ntBASIC-1.85□□□□□ -2.71
CTSDP07339 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.86□□□□□ -2.71
CTSDP07339 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.86□□□□□ -2.71
CTSDP07339 SNORA33.2-201ENST00000365413 134 ntBASIC-1.86□□□□□ -2.71
CTSDP07339 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.86□□□□□ -2.71
CTSDP07339 RNU6-639P-201ENST00000384074 107 ntBASIC-1.86□□□□□ -2.71
CTSDP07339 MIR521-2-201ENST00000384818 87 ntBASIC-1.86□□□□□ -2.71
CTSDP07339 SNORD19-201ENST00000391191 68 ntBASIC-1.86□□□□□ -2.71
CTSDP07339 RNA5SP272-201ENST00000516095 111 ntBASIC-1.86□□□□□ -2.71
CTSDP07339 RNU4-71P-201ENST00000516258 113 ntBASIC-1.86□□□□□ -2.71
CTSDP07339 Y_RNA.20-201ENST00000362479 113 ntBASIC-1.87□□□□□ -2.71
CTSDP07339 RNU6-832P-201ENST00000363319 107 ntBASIC-1.87□□□□□ -2.71
CTSDP07339 Y_RNA.460-201ENST00000384255 102 ntBASIC-1.87□□□□□ -2.71
CTSDP07339 Y_RNA.574-201ENST00000384766 95 ntBASIC-1.87□□□□□ -2.71
CTSDP07339 MIR519A2-201ENST00000384990 87 ntBASIC-1.87□□□□□ -2.71
CTSDP07339 RNU7-88P-201ENST00000458752 63 ntBASIC-1.87□□□□□ -2.71
CTSDP07339 RNU7-197P-201ENST00000458836 62 ntBASIC-1.87□□□□□ -2.71
CTSDP07339 AC020661.2-201ENST00000560114 134 ntBASIC-1.87□□□□□ -2.71
CTSDP07339 RNU5F-1-201ENST00000362507 117 ntBASIC-1.88□□□□□ -2.71
CTSDP07339 RNU6-774P-201ENST00000363238 107 ntBASIC-1.88□□□□□ -2.71
CTSDP07339 RNU6-824P-201ENST00000363724 104 ntBASIC-1.88□□□□□ -2.71
CTSDP07339 RNU6-704P-201ENST00000364162 103 ntBASIC-1.88□□□□□ -2.71
CTSDP07339 Y_RNA.509-201ENST00000384506 99 ntBASIC-1.88□□□□□ -2.71
CTSDP07339 RNA5SP292-201ENST00000390974 118 ntBASIC-1.88□□□□□ -2.71
CTSDP07339 RNU6-460P-201ENST00000391158 108 ntBASIC-1.88□□□□□ -2.71
CTSDP07339 MIR548I1-201ENST00000408810 149 ntBASIC-1.88□□□□□ -2.71
CTSDP07339 AL691482.2-201ENST00000457453 84 ntBASIC-1.88□□□□□ -2.71
CTSDP07339 RNU4-11P-201ENST00000365287 132 ntBASIC-1.89□□□□□ -2.71
CTSDP07339 MIR487B-201ENST00000385021 84 ntBASIC-1.89□□□□□ -2.71
CTSDP07339 RNU6-519P-201ENST00000410590 108 ntBASIC-1.89□□□□□ -2.71
CTSDP07339 MTATP8P1-201ENST00000467115 207 ntBASIC-1.89□□□□□ -2.71
CTSDP07339 RNU6-518P-201ENST00000516056 96 ntBASIC-1.89□□□□□ -2.71
CTSDP07339 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.89□□□□□ -2.71
CTSDP07339 SNORA18.5-201ENST00000516616 101 ntBASIC-1.89□□□□□ -2.71
CTSDP07339 MIR548AG1-201ENST00000579932 66 ntBASIC-1.89□□□□□ -2.71
CTSDP07339 RNY3P2-201ENST00000362918 102 ntBASIC-1.9□□□□□ -2.71
CTSDP07339 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.9□□□□□ -2.71
CTSDP07339 RNU6-781P-201ENST00000516377 101 ntBASIC-1.9□□□□□ -2.71
CTSDP07339 RNU6-1153P-201ENST00000516760 105 ntBASIC-1.9□□□□□ -2.71
CTSDP07339 SNORD18.1-201ENST00000363807 70 ntBASIC-1.91□□□□□ -2.72
CTSDP07339 SNORD45B-201ENST00000364617 72 ntBASIC-1.91□□□□□ -2.72
CTSDP07339 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.91□□□□□ -2.72
CTSDP07339 AL021921.1-201ENST00000442774 93 ntBASIC-1.91□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 192.2 ms