Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 RNU6-520P-201ENST00000384717 104 ntBASIC1.78□□□□□ -2.12
ALDH1A1P00352 RNU5B-6P-201ENST00000516765 68 ntBASIC1.78□□□□□ -2.12
ALDH1A1P00352 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
ALDH1A1P00352 SNORD12-201ENST00000391002 90 ntBASIC1.77□□□□□ -2.13
ALDH1A1P00352 Y_RNA.633-201ENST00000459107 95 ntBASIC1.77□□□□□ -2.13
ALDH1A1P00352 RNA5SP47-201ENST00000517230 109 ntBASIC1.77□□□□□ -2.13
ALDH1A1P00352 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.77□□□□□ -2.13
ALDH1A1P00352 SNORD18A-201ENST00000363753 72 ntBASIC1.76□□□□□ -2.13
ALDH1A1P00352 MIR548L-201ENST00000408303 86 ntBASIC1.76□□□□□ -2.13
ALDH1A1P00352 SNORA70.22-201ENST00000517160 124 ntBASIC1.76□□□□□ -2.13
ALDH1A1P00352 Y_RNA.379-201ENST00000365653 102 ntBASIC1.75□□□□□ -2.13
ALDH1A1P00352 RNU6-269P-201ENST00000391077 97 ntBASIC1.75□□□□□ -2.13
ALDH1A1P00352 RNU6-469P-201ENST00000516253 101 ntBASIC1.75□□□□□ -2.13
ALDH1A1P00352 MIR548AD-201ENST00000584780 82 ntBASIC1.75□□□□□ -2.13
ALDH1A1P00352 AC022709.1-201ENST00000615967 87 ntBASIC1.75□□□□□ -2.13
ALDH1A1P00352 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.75□□□□□ -2.13
ALDH1A1P00352 SNORA8.2-201ENST00000384372 139 ntBASIC1.74□□□□□ -2.13
ALDH1A1P00352 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.74□□□□□ -2.13
ALDH1A1P00352 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
ALDH1A1P00352 SNORA15B-2-201ENST00000384058 135 ntBASIC1.73□□□□□ -2.13
ALDH1A1P00352 SNORA15B-1-201ENST00000384334 135 ntBASIC1.73□□□□□ -2.13
ALDH1A1P00352 MIR1323-201ENST00000408090 73 ntBASIC1.73□□□□□ -2.13
ALDH1A1P00352 AC002429.1-201ENST00000437672 148 ntBASIC1.73□□□□□ -2.13
ALDH1A1P00352 AC021146.9-201ENST00000512503 156 ntBASIC1.73□□□□□ -2.13
ALDH1A1P00352 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.73□□□□□ -2.13
ALDH1A1P00352 uc_338.10-201ENST00000621872 182 ntBASIC1.73□□□□□ -2.13
ALDH1A1P00352 SNORA33.1-201ENST00000364957 130 ntBASIC1.72□□□□□ -2.13
ALDH1A1P00352 RNU6-716P-201ENST00000365621 103 ntBASIC1.72□□□□□ -2.13
ALDH1A1P00352 RNA5SP484-201ENST00000458857 111 ntBASIC1.72□□□□□ -2.13
ALDH1A1P00352 MIR4285-201ENST00000581001 85 ntBASIC1.72□□□□□ -2.13
ALDH1A1P00352 MIR6515-201ENST00000619843 57 ntBASIC1.72□□□□□ -2.13
ALDH1A1P00352 Y_RNA.125-201ENST00000363371 111 ntBASIC1.71□□□□□ -2.14
ALDH1A1P00352 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
ALDH1A1P00352 AL354695.1-201ENST00000427935 228 ntBASIC1.7□□□□□ -2.14
ALDH1A1P00352 RNU6-1110P-201ENST00000516462 101 ntBASIC1.7□□□□□ -2.14
ALDH1A1P00352 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
ALDH1A1P00352 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
ALDH1A1P00352 RNU6-753P-201ENST00000363926 107 ntBASIC1.69□□□□□ -2.14
ALDH1A1P00352 SNORA41B-201ENST00000384785 128 ntBASIC1.69□□□□□ -2.14
ALDH1A1P00352 MIR758-201ENST00000390227 88 ntBASIC1.69□□□□□ -2.14
ALDH1A1P00352 MIR3122-201ENST00000577243 73 ntBASIC1.69□□□□□ -2.14
ALDH1A1P00352 MIR6779-201ENST00000617283 64 ntBASIC1.69□□□□□ -2.14
ALDH1A1P00352 SNORD105-201ENST00000386910 85 ntBASIC1.68□□□□□ -2.14
ALDH1A1P00352 SCARNA17.3-201ENST00000516381 125 ntBASIC1.68□□□□□ -2.14
ALDH1A1P00352 RNU6-980P-201ENST00000516925 103 ntBASIC1.68□□□□□ -2.14
ALDH1A1P00352 MIR3678-201ENST00000578455 94 ntBASIC1.68□□□□□ -2.14
ALDH1A1P00352 AL162376.1-201ENST00000624117 175 ntBASIC1.68□□□□□ -2.14
ALDH1A1P00352 SNORA63.6-201ENST00000364921 119 ntBASIC1.67□□□□□ -2.14
ALDH1A1P00352 SNORD48-201ENST00000364953 64 ntBASIC1.67□□□□□ -2.14
ALDH1A1P00352 SNORD89-201ENST00000390981 114 ntBASIC1.67□□□□□ -2.14
ALDH1A1P00352 SCARNA16.5-201ENST00000517114 183 ntBASIC1.67□□□□□ -2.14
ALDH1A1P00352 MIR96-201ENST00000362288 78 ntBASIC1.66□□□□□ -2.14
ALDH1A1P00352 RNU1-93P-201ENST00000364704 169 ntBASIC1.66□□□□□ -2.14
ALDH1A1P00352 Y_RNA.325-201ENST00000365171 122 ntBASIC1.66□□□□□ -2.14
ALDH1A1P00352 MIR652-201ENST00000385278 98 ntBASIC1.66□□□□□ -2.14
ALDH1A1P00352 U7.7-201ENST00000459276 60 ntBASIC1.66□□□□□ -2.14
ALDH1A1P00352 RNU7-119P-201ENST00000459279 63 ntBASIC1.66□□□□□ -2.14
ALDH1A1P00352 MIR582-201ENST00000365731 98 ntBASIC1.65□□□□□ -2.15
ALDH1A1P00352 MIR1304-201ENST00000408243 91 ntBASIC1.65□□□□□ -2.15
ALDH1A1P00352 RNU6-1223P-201ENST00000517124 104 ntBASIC1.65□□□□□ -2.15
ALDH1A1P00352 RNA5SP325-201ENST00000363756 130 ntBASIC1.64□□□□□ -2.15
ALDH1A1P00352 Y_RNA.246-201ENST00000364495 108 ntBASIC1.64□□□□□ -2.15
ALDH1A1P00352 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.64□□□□□ -2.15
ALDH1A1P00352 PVT1_3.1-201ENST00000620853 95 ntBASIC1.64□□□□□ -2.15
ALDH1A1P00352 MIR6828-201ENST00000636181 60 ntBASIC1.64□□□□□ -2.15
ALDH1A1P00352 Y_RNA.407-201ENST00000383986 113 ntBASIC1.63□□□□□ -2.15
ALDH1A1P00352 MIR222-201ENST00000384992 110 ntBASIC1.63□□□□□ -2.15
ALDH1A1P00352 MIR598-201ENST00000384868 97 ntBASIC1.62□□□□□ -2.15
ALDH1A1P00352 MIR573-201ENST00000384964 99 ntBASIC1.62□□□□□ -2.15
ALDH1A1P00352 MIR548E-201ENST00000408287 88 ntBASIC1.62□□□□□ -2.15
ALDH1A1P00352 RNU6-231P-201ENST00000517122 103 ntBASIC1.62□□□□□ -2.15
ALDH1A1P00352 MIR3612-201ENST00000579753 87 ntBASIC1.62□□□□□ -2.15
ALDH1A1P00352 MIR548AE1-201ENST00000583292 70 ntBASIC1.62□□□□□ -2.15
ALDH1A1P00352 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
ALDH1A1P00352 RNA5SP363-201ENST00000365072 115 ntBASIC1.61□□□□□ -2.15
ALDH1A1P00352 SNORA25-201ENST00000384384 134 ntBASIC1.61□□□□□ -2.15
ALDH1A1P00352 RNU6-1246P-201ENST00000391064 107 ntBASIC1.61□□□□□ -2.15
ALDH1A1P00352 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
ALDH1A1P00352 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.6□□□□□ -2.15
ALDH1A1P00352 FABP5P4-201ENST00000437203 171 ntBASIC1.6□□□□□ -2.15
ALDH1A1P00352 MIR151B-201ENST00000584249 96 ntBASIC1.6□□□□□ -2.15
ALDH1A1P00352 DLEU2_4.2-201ENST00000616613 58 ntBASIC1.6□□□□□ -2.15
ALDH1A1P00352 MIR520E-201ENST00000384867 87 ntBASIC1.59□□□□□ -2.15
ALDH1A1P00352 MIR6788-201ENST00000618842 66 ntBASIC1.59□□□□□ -2.15
ALDH1A1P00352 SNORA9.1-201ENST00000362412 131 ntBASIC1.58□□□□□ -2.16
ALDH1A1P00352 RNU6-35P-201ENST00000384530 107 ntBASIC1.58□□□□□ -2.16
ALDH1A1P00352 CYP3A54P-201ENST00000566950 75 ntBASIC1.58□□□□□ -2.16
ALDH1A1P00352 MIR3660-201ENST00000584845 100 ntBASIC1.58□□□□□ -2.16
ALDH1A1P00352 SNORA25.8-201ENST00000364831 128 ntBASIC1.57□□□□□ -2.16
ALDH1A1P00352 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
ALDH1A1P00352 RPS29P1-201ENST00000465274 159 ntBASIC1.57□□□□□ -2.16
ALDH1A1P00352 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.57□□□□□ -2.16
ALDH1A1P00352 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.57□□□□□ -2.16
ALDH1A1P00352 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
ALDH1A1P00352 RNA5SP327-201ENST00000362494 101 ntBASIC1.56□□□□□ -2.16
ALDH1A1P00352 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.56□□□□□ -2.16
ALDH1A1P00352 SNORD116-16-201ENST00000384533 92 ntBASIC1.55□□□□□ -2.16
ALDH1A1P00352 RNU6-997P-201ENST00000384725 107 ntBASIC1.55□□□□□ -2.16
ALDH1A1P00352 MIR19B1-201ENST00000384829 87 ntBASIC1.55□□□□□ -2.16
ALDH1A1P00352 SNORA40.16-201ENST00000517238 121 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 237.1 ms