Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.69□□□□□ -2.3
SMAD6O43541 MIR3675-201ENST00000583661 73 ntBASIC0.69□□□□□ -2.3
SMAD6O43541 MIR548O2-201ENST00000616090 70 ntBASIC0.69□□□□□ -2.3
SMAD6O43541 MIR6828-201ENST00000636181 60 ntBASIC0.69□□□□□ -2.3
SMAD6O43541 SNORD45.1-201ENST00000363181 77 ntBASIC0.68□□□□□ -2.3
SMAD6O43541 Y_RNA.118-201ENST00000363300 101 ntBASIC0.68□□□□□ -2.3
SMAD6O43541 RNY1P8-201ENST00000383970 114 ntBASIC0.68□□□□□ -2.3
SMAD6O43541 MIR203A-201ENST00000384836 110 ntBASIC0.68□□□□□ -2.3
SMAD6O43541 MIR489-201ENST00000384923 84 ntBASIC0.68□□□□□ -2.3
SMAD6O43541 MIR216B-201ENST00000390186 82 ntBASIC0.68□□□□□ -2.3
SMAD6O43541 RNU6-604P-201ENST00000390917 100 ntBASIC0.68□□□□□ -2.3
SMAD6O43541 RNU6-269P-201ENST00000391077 97 ntBASIC0.68□□□□□ -2.3
SMAD6O43541 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.68□□□□□ -2.3
SMAD6O43541 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.68□□□□□ -2.3
SMAD6O43541 AC093423.1-201ENST00000440817 142 ntBASIC0.68□□□□□ -2.3
SMAD6O43541 RNU7-74P-201ENST00000459104 62 ntBASIC0.68□□□□□ -2.3
SMAD6O43541 RNA5SP227-201ENST00000516184 113 ntBASIC0.68□□□□□ -2.3
SMAD6O43541 RNA5SP94-201ENST00000516917 108 ntBASIC0.68□□□□□ -2.3
SMAD6O43541 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
SMAD6O43541 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
SMAD6O43541 RNU6-495P-201ENST00000362995 107 ntBASIC0.67□□□□□ -2.3
SMAD6O43541 RNU6-681P-201ENST00000364012 104 ntBASIC0.67□□□□□ -2.3
SMAD6O43541 RNU4-45P-201ENST00000365469 141 ntBASIC0.67□□□□□ -2.3
SMAD6O43541 RNU6V-201ENST00000384105 107 ntBASIC0.67□□□□□ -2.3
SMAD6O43541 SNORD116-24-201ENST00000384549 92 ntBASIC0.67□□□□□ -2.3
SMAD6O43541 SNORD30.1-201ENST00000391309 70 ntBASIC0.67□□□□□ -2.3
SMAD6O43541 AL590095.2-201ENST00000604136 117 ntBASIC0.67□□□□□ -2.3
SMAD6O43541 AL109933.3-201ENST00000619095 188 ntBASIC0.67□□□□□ -2.3
SMAD6O43541 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.67□□□□□ -2.3
SMAD6O43541 RNU1-141P-201ENST00000364623 158 ntBASIC0.66□□□□□ -2.3
SMAD6O43541 RNU6-590P-201ENST00000365039 107 ntBASIC0.66□□□□□ -2.3
SMAD6O43541 RNU6-649P-201ENST00000384463 107 ntBASIC0.66□□□□□ -2.3
SMAD6O43541 RNU6-110P-201ENST00000384508 104 ntBASIC0.66□□□□□ -2.3
SMAD6O43541 RNU6-663P-201ENST00000391105 106 ntBASIC0.66□□□□□ -2.3
SMAD6O43541 SNORD75.2-201ENST00000408784 58 ntBASIC0.66□□□□□ -2.3
SMAD6O43541 RNU6-871P-201ENST00000516122 100 ntBASIC0.66□□□□□ -2.3
SMAD6O43541 RNU6-982P-201ENST00000516216 102 ntBASIC0.66□□□□□ -2.3
SMAD6O43541 RNA5SP268-201ENST00000516828 124 ntBASIC0.66□□□□□ -2.3
SMAD6O43541 AL162376.1-201ENST00000624117 175 ntBASIC0.66□□□□□ -2.3
SMAD6O43541 U6.111-201ENST00000636093 83 ntBASIC0.66□□□□□ -2.3
SMAD6O43541 RNU6-990P-201ENST00000364385 104 ntBASIC0.65□□□□□ -2.31
SMAD6O43541 RNU6-1039P-201ENST00000383931 107 ntBASIC0.65□□□□□ -2.31
SMAD6O43541 SNORA36.2-201ENST00000384004 127 ntBASIC0.65□□□□□ -2.31
SMAD6O43541 SNORA8.2-201ENST00000384372 139 ntBASIC0.65□□□□□ -2.31
SMAD6O43541 RNA5SP484-201ENST00000458857 111 ntBASIC0.65□□□□□ -2.31
SMAD6O43541 RNU6-274P-201ENST00000459566 107 ntBASIC0.65□□□□□ -2.31
SMAD6O43541 MIR4460-201ENST00000577862 86 ntBASIC0.65□□□□□ -2.31
SMAD6O43541 AC005520.4-201ENST00000604337 90 ntBASIC0.65□□□□□ -2.31
SMAD6O43541 MIR7107-201ENST00000611489 80 ntBASIC0.65□□□□□ -2.31
SMAD6O43541 MIR7111-201ENST00000619751 72 ntBASIC0.65□□□□□ -2.31
SMAD6O43541 MIR6515-201ENST00000619843 57 ntBASIC0.65□□□□□ -2.31
SMAD6O43541 SNORD113.1-201ENST00000363280 73 ntBASIC0.64□□□□□ -2.31
SMAD6O43541 RNU6-800P-201ENST00000384473 103 ntBASIC0.64□□□□□ -2.31
SMAD6O43541 MT-TY-201ENST00000387409 66 ntBASIC0.64□□□□□ -2.31
SMAD6O43541 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.64□□□□□ -2.31
SMAD6O43541 RNU7-24P-201ENST00000458867 62 ntBASIC0.64□□□□□ -2.31
SMAD6O43541 RNU6-881P-201ENST00000516813 102 ntBASIC0.64□□□□□ -2.31
SMAD6O43541 AC018659.1-201ENST00000551083 169 ntBASIC0.64□□□□□ -2.31
SMAD6O43541 Y_RNA.340-201ENST00000365330 92 ntBASIC0.63□□□□□ -2.31
SMAD6O43541 AL691482.2-201ENST00000457453 84 ntBASIC0.63□□□□□ -2.31
SMAD6O43541 RNU5B-6P-201ENST00000516765 68 ntBASIC0.63□□□□□ -2.31
SMAD6O43541 MIR6509-201ENST00000614603 85 ntBASIC0.63□□□□□ -2.31
SMAD6O43541 RNA5SP517-201ENST00000364724 117 ntBASIC0.62□□□□□ -2.31
SMAD6O43541 MIR140-201ENST00000385282 100 ntBASIC0.62□□□□□ -2.31
SMAD6O43541 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.62□□□□□ -2.31
SMAD6O43541 RNA5SP499-201ENST00000363982 119 ntBASIC0.61□□□□□ -2.31
SMAD6O43541 RNU6-630P-201ENST00000391258 106 ntBASIC0.61□□□□□ -2.31
SMAD6O43541 RNU6-752P-201ENST00000516376 102 ntBASIC0.61□□□□□ -2.31
SMAD6O43541 RNA5SP147-201ENST00000516493 109 ntBASIC0.61□□□□□ -2.31
SMAD6O43541 RNA5SP121-201ENST00000516537 101 ntBASIC0.61□□□□□ -2.31
SMAD6O43541 MIR4752-201ENST00000579672 72 ntBASIC0.61□□□□□ -2.31
SMAD6O43541 MIR3657-201ENST00000584818 117 ntBASIC0.61□□□□□ -2.31
SMAD6O43541 Y_RNA.205-201ENST00000364128 113 ntBASIC0.6□□□□□ -2.31
SMAD6O43541 Y_RNA.443-201ENST00000384135 111 ntBASIC0.6□□□□□ -2.31
SMAD6O43541 MIR9-2-201ENST00000384838 87 ntBASIC0.6□□□□□ -2.31
SMAD6O43541 MIR548AE1-201ENST00000583292 70 ntBASIC0.6□□□□□ -2.31
SMAD6O43541 AC069503.3-201ENST00000618674 145 ntBASIC0.6□□□□□ -2.31
SMAD6O43541 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.59□□□□□ -2.31
SMAD6O43541 RNU6-1216P-201ENST00000362590 107 ntBASIC0.59□□□□□ -2.31
SMAD6O43541 RNU6-895P-201ENST00000384125 103 ntBASIC0.59□□□□□ -2.31
SMAD6O43541 snoU13.13-201ENST00000458842 104 ntBASIC0.59□□□□□ -2.31
SMAD6O43541 RNU1-29P-201ENST00000606574 126 ntBASIC0.59□□□□□ -2.31
SMAD6O43541 SNORA25.18-201ENST00000607153 114 ntBASIC0.59□□□□□ -2.31
SMAD6O43541 SNORA70.25-201ENST00000612741 95 ntBASIC0.59□□□□□ -2.31
SMAD6O43541 MIR8053-201ENST00000613344 75 ntBASIC0.59□□□□□ -2.31
SMAD6O43541 AC073869.9-201ENST00000641610 120 ntBASIC0.59□□□□□ -2.31
SMAD6O43541 RNU6-260P-201ENST00000384092 107 ntBASIC0.58□□□□□ -2.32
SMAD6O43541 AC006210.1-201ENST00000424882 111 ntBASIC0.58□□□□□ -2.32
SMAD6O43541 AC098934.3-201ENST00000430450 190 ntBASIC0.58□□□□□ -2.32
SMAD6O43541 AC125388.1-201ENST00000459631 156 ntBASIC0.58□□□□□ -2.32
SMAD6O43541 AC092634.7-201ENST00000621022 103 ntBASIC0.58□□□□□ -2.32
SMAD6O43541 MIR6513-201ENST00000621188 64 ntBASIC0.58□□□□□ -2.32
SMAD6O43541 RNU6-471P-201ENST00000383944 106 ntBASIC0.57□□□□□ -2.32
SMAD6O43541 SNORD110-201ENST00000408189 75 ntBASIC0.57□□□□□ -2.32
SMAD6O43541 AC069271.1-201ENST00000445577 156 ntBASIC0.57□□□□□ -2.32
SMAD6O43541 RNU4-54P-201ENST00000516428 129 ntBASIC0.57□□□□□ -2.32
SMAD6O43541 PVT1_3.1-201ENST00000620853 95 ntBASIC0.57□□□□□ -2.32
SMAD6O43541 RNU6-645P-201ENST00000364649 106 ntBASIC0.56□□□□□ -2.32
SMAD6O43541 MIR582-201ENST00000365731 98 ntBASIC0.56□□□□□ -2.32
SMAD6O43541 RNU6-656P-201ENST00000516785 107 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 348.9 ms