Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 MIR5706-201ENST00000579841 80 ntBASIC0.88□□□□□ -2.27
SHISA3A0PJX4 MIR6504-201ENST00000613520 61 ntBASIC0.88□□□□□ -2.27
SHISA3A0PJX4 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
SHISA3A0PJX4 SNORD113.1-201ENST00000363280 73 ntBASIC0.87□□□□□ -2.27
SHISA3A0PJX4 RNY1P8-201ENST00000383970 114 ntBASIC0.87□□□□□ -2.27
SHISA3A0PJX4 Y_RNA.407-201ENST00000383986 113 ntBASIC0.87□□□□□ -2.27
SHISA3A0PJX4 MIR1276-201ENST00000408707 83 ntBASIC0.87□□□□□ -2.27
SHISA3A0PJX4 AC087343.1-201ENST00000477341 475 ntBASIC0.87□□□□□ -2.27
SHISA3A0PJX4 RNA5SP102-201ENST00000516865 106 ntBASIC0.87□□□□□ -2.27
SHISA3A0PJX4 AC018659.1-201ENST00000551083 169 ntBASIC0.87□□□□□ -2.27
SHISA3A0PJX4 MIR4295-201ENST00000585286 85 ntBASIC0.87□□□□□ -2.27
SHISA3A0PJX4 U6.111-201ENST00000636093 83 ntBASIC0.87□□□□□ -2.27
SHISA3A0PJX4 RNU6-1216P-201ENST00000362590 107 ntBASIC0.86□□□□□ -2.27
SHISA3A0PJX4 RNU4-38P-201ENST00000364472 129 ntBASIC0.86□□□□□ -2.27
SHISA3A0PJX4 Y_RNA.250-201ENST00000364542 110 ntBASIC0.86□□□□□ -2.27
SHISA3A0PJX4 MIR203A-201ENST00000384836 110 ntBASIC0.86□□□□□ -2.27
SHISA3A0PJX4 SNORA40.8-201ENST00000411034 126 ntBASIC0.86□□□□□ -2.27
SHISA3A0PJX4 Y_RNA.224-201ENST00000364308 111 ntBASIC0.85□□□□□ -2.27
SHISA3A0PJX4 SNORD71-201ENST00000411292 86 ntBASIC0.85□□□□□ -2.27
SHISA3A0PJX4 ACA64.5-201ENST00000516207 127 ntBASIC0.85□□□□□ -2.27
SHISA3A0PJX4 AC211469.2-201ENST00000605461 205 ntBASIC0.85□□□□□ -2.27
SHISA3A0PJX4 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.85□□□□□ -2.27
SHISA3A0PJX4 SNORD118-201ENST00000363593 134 ntBASIC0.84□□□□□ -2.27
SHISA3A0PJX4 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.84□□□□□ -2.27
SHISA3A0PJX4 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.28
SHISA3A0PJX4 MTND4LP1-201ENST00000446263 157 ntBASIC0.83□□□□□ -2.28
SHISA3A0PJX4 SCARNA17.3-201ENST00000516381 125 ntBASIC0.83□□□□□ -2.28
SHISA3A0PJX4 AL590095.2-201ENST00000604136 117 ntBASIC0.83□□□□□ -2.28
SHISA3A0PJX4 SNORA70.25-201ENST00000612741 95 ntBASIC0.83□□□□□ -2.28
SHISA3A0PJX4 RNU6-1187P-201ENST00000364771 110 ntBASIC0.82□□□□□ -2.28
SHISA3A0PJX4 RNU6-800P-201ENST00000384473 103 ntBASIC0.82□□□□□ -2.28
SHISA3A0PJX4 MIR4452-201ENST00000583004 71 ntBASIC0.82□□□□□ -2.28
SHISA3A0PJX4 SNORA25.18-201ENST00000607153 114 ntBASIC0.82□□□□□ -2.28
SHISA3A0PJX4 U7.6-201ENST00000610841 64 ntBASIC0.82□□□□□ -2.28
SHISA3A0PJX4 RNU6-990P-201ENST00000364385 104 ntBASIC0.81□□□□□ -2.28
SHISA3A0PJX4 Y_RNA.443-201ENST00000384135 111 ntBASIC0.81□□□□□ -2.28
SHISA3A0PJX4 PSMC1P5-201ENST00000512850 177 ntBASIC0.81□□□□□ -2.28
SHISA3A0PJX4 RNU6-848P-201ENST00000515948 107 ntBASIC0.81□□□□□ -2.28
SHISA3A0PJX4 RNU6-617P-201ENST00000516147 107 ntBASIC0.81□□□□□ -2.28
SHISA3A0PJX4 RNU6-473P-201ENST00000516164 107 ntBASIC0.81□□□□□ -2.28
SHISA3A0PJX4 RNU6-1049P-201ENST00000516414 107 ntBASIC0.81□□□□□ -2.28
SHISA3A0PJX4 MIR4473-201ENST00000583731 91 ntBASIC0.81□□□□□ -2.28
SHISA3A0PJX4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.8□□□□□ -2.28
SHISA3A0PJX4 SNORA25.4-201ENST00000363666 124 ntBASIC0.8□□□□□ -2.28
SHISA3A0PJX4 SNORD116-24-201ENST00000384549 92 ntBASIC0.8□□□□□ -2.28
SHISA3A0PJX4 MIR518A1-201ENST00000385068 85 ntBASIC0.8□□□□□ -2.28
SHISA3A0PJX4 AC069271.1-201ENST00000445577 156 ntBASIC0.8□□□□□ -2.28
SHISA3A0PJX4 SNORA40.17-201ENST00000517256 115 ntBASIC0.8□□□□□ -2.28
SHISA3A0PJX4 RNU1-29P-201ENST00000606574 126 ntBASIC0.8□□□□□ -2.28
SHISA3A0PJX4 MIR6739-201ENST00000622461 75 ntBASIC0.8□□□□□ -2.28
SHISA3A0PJX4 Y_RNA.386-201ENST00000383913 105 ntBASIC0.79□□□□□ -2.28
SHISA3A0PJX4 MIR652-201ENST00000385278 98 ntBASIC0.79□□□□□ -2.28
SHISA3A0PJX4 RNU6-630P-201ENST00000391258 106 ntBASIC0.79□□□□□ -2.28
SHISA3A0PJX4 RNU6-982P-201ENST00000516216 102 ntBASIC0.79□□□□□ -2.28
SHISA3A0PJX4 RNA5SP220-201ENST00000516298 104 ntBASIC0.79□□□□□ -2.28
SHISA3A0PJX4 MIR4752-201ENST00000579672 72 ntBASIC0.79□□□□□ -2.28
SHISA3A0PJX4 uc_338.10-201ENST00000621872 182 ntBASIC0.79□□□□□ -2.28
SHISA3A0PJX4 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
SHISA3A0PJX4 RNU6-645P-201ENST00000364649 106 ntBASIC0.78□□□□□ -2.28
SHISA3A0PJX4 MIR548AE1-201ENST00000583292 70 ntBASIC0.78□□□□□ -2.28
SHISA3A0PJX4 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.78□□□□□ -2.29
SHISA3A0PJX4 Y_RNA.125-201ENST00000363371 111 ntBASIC0.77□□□□□ -2.29
SHISA3A0PJX4 SNORD114-27-201ENST00000363766 70 ntBASIC0.77□□□□□ -2.29
SHISA3A0PJX4 SNORD114-22-201ENST00000365423 72 ntBASIC0.77□□□□□ -2.29
SHISA3A0PJX4 SNORA2A-201ENST00000383885 135 ntBASIC0.77□□□□□ -2.29
SHISA3A0PJX4 HMGN2P22-201ENST00000427588 175 ntBASIC0.77□□□□□ -2.29
SHISA3A0PJX4 AC125388.1-201ENST00000459631 156 ntBASIC0.77□□□□□ -2.29
SHISA3A0PJX4 AC005520.4-201ENST00000604337 90 ntBASIC0.77□□□□□ -2.29
SHISA3A0PJX4 RNU6-668P-201ENST00000364180 107 ntBASIC0.76□□□□□ -2.29
SHISA3A0PJX4 RNU6-471P-201ENST00000383944 106 ntBASIC0.76□□□□□ -2.29
SHISA3A0PJX4 RNU6-42P-201ENST00000384165 107 ntBASIC0.76□□□□□ -2.29
SHISA3A0PJX4 RNU6-1162P-201ENST00000384443 104 ntBASIC0.76□□□□□ -2.29
SHISA3A0PJX4 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
SHISA3A0PJX4 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.76□□□□□ -2.29
SHISA3A0PJX4 RPL39P28-201ENST00000465655 155 ntBASIC0.76□□□□□ -2.29
SHISA3A0PJX4 RNU6-863P-201ENST00000515989 104 ntBASIC0.76□□□□□ -2.29
SHISA3A0PJX4 RNA5SP147-201ENST00000516493 109 ntBASIC0.76□□□□□ -2.29
SHISA3A0PJX4 MIR96-201ENST00000362288 78 ntBASIC0.75□□□□□ -2.29
SHISA3A0PJX4 RNU1-93P-201ENST00000364704 169 ntBASIC0.75□□□□□ -2.29
SHISA3A0PJX4 SNORA63.6-201ENST00000364921 119 ntBASIC0.75□□□□□ -2.29
SHISA3A0PJX4 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.75□□□□□ -2.29
SHISA3A0PJX4 AC098934.3-201ENST00000430450 190 ntBASIC0.75□□□□□ -2.29
SHISA3A0PJX4 snoU13.18-201ENST00000459483 104 ntBASIC0.75□□□□□ -2.29
SHISA3A0PJX4 AC021146.9-201ENST00000512503 156 ntBASIC0.75□□□□□ -2.29
SHISA3A0PJX4 MIR4653-201ENST00000585107 83 ntBASIC0.75□□□□□ -2.29
SHISA3A0PJX4 MIR6857-201ENST00000613267 93 ntBASIC0.75□□□□□ -2.29
SHISA3A0PJX4 MIR6734-201ENST00000621166 68 ntBASIC0.75□□□□□ -2.29
SHISA3A0PJX4 Y_RNA.340-201ENST00000365330 92 ntBASIC0.74□□□□□ -2.29
SHISA3A0PJX4 SNORA15B-2-201ENST00000384058 135 ntBASIC0.74□□□□□ -2.29
SHISA3A0PJX4 SNORA15B-1-201ENST00000384334 135 ntBASIC0.74□□□□□ -2.29
SHISA3A0PJX4 MIR521-2-201ENST00000384818 87 ntBASIC0.74□□□□□ -2.29
SHISA3A0PJX4 RNU6-229P-201ENST00000516614 102 ntBASIC0.74□□□□□ -2.29
SHISA3A0PJX4 SNORD114-2-201ENST00000363953 78 ntBASIC0.73□□□□□ -2.29
SHISA3A0PJX4 MIR146A-201ENST00000385201 99 ntBASIC0.73□□□□□ -2.29
SHISA3A0PJX4 RNU6-351P-201ENST00000516097 100 ntBASIC0.73□□□□□ -2.29
SHISA3A0PJX4 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.73□□□□□ -2.29
SHISA3A0PJX4 MIR532-201ENST00000385025 91 ntBASIC0.72□□□□□ -2.29
SHISA3A0PJX4 AC244090.1-201ENST00000441884 93 ntBASIC0.72□□□□□ -2.29
SHISA3A0PJX4 RNU6-656P-201ENST00000516785 107 ntBASIC0.72□□□□□ -2.29
SHISA3A0PJX4 MIR20A-201ENST00000362279 71 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 229.4 ms