Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 SNORD41.1-201ENST00000391000 69 ntBASIC2.34□□□□□ -2.03
PHF8Q9UPP1 AC008834.1-201ENST00000511612 175 ntBASIC2.34□□□□□ -2.03
PHF8Q9UPP1 RNU6-1089P-201ENST00000516473 104 ntBASIC2.34□□□□□ -2.03
PHF8Q9UPP1 RNU6-656P-201ENST00000516785 107 ntBASIC2.34□□□□□ -2.03
PHF8Q9UPP1 RNU6-122P-201ENST00000516818 107 ntBASIC2.34□□□□□ -2.03
PHF8Q9UPP1 MIR4639-201ENST00000584938 69 ntBASIC2.34□□□□□ -2.03
PHF8Q9UPP1 AL096840.1-201ENST00000603287 93 ntBASIC2.34□□□□□ -2.03
PHF8Q9UPP1 AL136317.1-201ENST00000612653 226 ntBASIC2.34□□□□□ -2.03
PHF8Q9UPP1 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.33□□□□□ -2.04
PHF8Q9UPP1 MT-TY-201ENST00000387409 66 ntBASIC2.33□□□□□ -2.04
PHF8Q9UPP1 RNU6ATAC8P-201ENST00000408460 126 ntBASIC2.33□□□□□ -2.04
PHF8Q9UPP1 Y_RNA.722-201ENST00000517279 114 ntBASIC2.33□□□□□ -2.04
PHF8Q9UPP1 SNORD12-201ENST00000391002 90 ntBASIC2.32□□□□□ -2.04
PHF8Q9UPP1 HMGN2P19-201ENST00000425149 265 ntBASIC2.32□□□□□ -2.04
PHF8Q9UPP1 MIR3938-201ENST00000582157 103 ntBASIC2.32□□□□□ -2.04
PHF8Q9UPP1 RNU6-92P-201ENST00000605893 104 ntBASIC2.32□□□□□ -2.04
PHF8Q9UPP1 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.32□□□□□ -2.04
PHF8Q9UPP1 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
PHF8Q9UPP1 SNORD114-4-201ENST00000363962 75 ntBASIC2.31□□□□□ -2.04
PHF8Q9UPP1 RNU6-808P-201ENST00000391233 108 ntBASIC2.31□□□□□ -2.04
PHF8Q9UPP1 AC002350.1-201ENST00000490759 375 ntBASIC2.31□□□□□ -2.04
PHF8Q9UPP1 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
PHF8Q9UPP1 RNU6-469P-201ENST00000516253 101 ntBASIC2.3□□□□□ -2.04
PHF8Q9UPP1 MIR4419B-201ENST00000577260 68 ntBASIC2.3□□□□□ -2.04
PHF8Q9UPP1 MIR4460-201ENST00000577862 86 ntBASIC2.3□□□□□ -2.04
PHF8Q9UPP1 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
PHF8Q9UPP1 SNORA7.1-201ENST00000363750 139 ntBASIC2.29□□□□□ -2.04
PHF8Q9UPP1 RNA5SP37-201ENST00000365420 130 ntBASIC2.29□□□□□ -2.04
PHF8Q9UPP1 MIR489-201ENST00000384923 84 ntBASIC2.29□□□□□ -2.04
PHF8Q9UPP1 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.29□□□□□ -2.04
PHF8Q9UPP1 RNA5SP338-201ENST00000410495 85 ntBASIC2.29□□□□□ -2.04
PHF8Q9UPP1 SNORA70.22-201ENST00000517160 124 ntBASIC2.29□□□□□ -2.04
PHF8Q9UPP1 AC018659.1-201ENST00000551083 169 ntBASIC2.29□□□□□ -2.04
PHF8Q9UPP1 RNU6-446P-201ENST00000362827 106 ntBASIC2.28□□□□□ -2.04
PHF8Q9UPP1 RNU6-392P-201ENST00000364926 101 ntBASIC2.28□□□□□ -2.04
PHF8Q9UPP1 Y_RNA.327-201ENST00000365201 102 ntBASIC2.28□□□□□ -2.04
PHF8Q9UPP1 SNORD28-201ENST00000384706 75 ntBASIC2.28□□□□□ -2.04
PHF8Q9UPP1 MIR676-201ENST00000390702 67 ntBASIC2.28□□□□□ -2.04
PHF8Q9UPP1 SNORA40.17-201ENST00000517256 115 ntBASIC2.28□□□□□ -2.04
PHF8Q9UPP1 uc_338.20-201ENST00000621563 178 ntBASIC2.28□□□□□ -2.04
PHF8Q9UPP1 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.27□□□□□ -2.05
PHF8Q9UPP1 RNU1-42P-201ENST00000364033 160 ntBASIC2.27□□□□□ -2.05
PHF8Q9UPP1 RNU6-1162P-201ENST00000384443 104 ntBASIC2.27□□□□□ -2.05
PHF8Q9UPP1 MIR644A-201ENST00000385262 94 ntBASIC2.27□□□□□ -2.05
PHF8Q9UPP1 MIR548L-201ENST00000408303 86 ntBASIC2.27□□□□□ -2.05
PHF8Q9UPP1 MIR1276-201ENST00000408707 83 ntBASIC2.27□□□□□ -2.05
PHF8Q9UPP1 RNA5SP147-201ENST00000516493 109 ntBASIC2.27□□□□□ -2.05
PHF8Q9UPP1 AC244669.1-204ENST00000621564 178 ntBASIC2.27□□□□□ -2.05
PHF8Q9UPP1 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
PHF8Q9UPP1 RNU6-990P-201ENST00000364385 104 ntBASIC2.26□□□□□ -2.05
PHF8Q9UPP1 RNU4ATAC4P-201ENST00000516307 126 ntBASIC2.26□□□□□ -2.05
PHF8Q9UPP1 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
PHF8Q9UPP1 SNORD53B-201ENST00000577887 78 ntBASIC2.25□□□□□ -2.05
PHF8Q9UPP1 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.25□□□□□ -2.05
PHF8Q9UPP1 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
PHF8Q9UPP1 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.25□□□□□ -2.05
PHF8Q9UPP1 AC012493.3-201ENST00000604494 112 ntBASIC2.24□□□□□ -2.05
PHF8Q9UPP1 RNA5SP489-201ENST00000410986 109 ntBASIC2.23□□□□□ -2.05
PHF8Q9UPP1 MIR7978-201ENST00000636158 59 ntBASIC2.23□□□□□ -2.05
PHF8Q9UPP1 MIR521-2-201ENST00000384818 87 ntBASIC2.22□□□□□ -2.05
PHF8Q9UPP1 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.22□□□□□ -2.05
PHF8Q9UPP1 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.22□□□□□ -2.05
PHF8Q9UPP1 RNU1-141P-201ENST00000364623 158 ntBASIC2.21□□□□□ -2.06
PHF8Q9UPP1 RNU6-726P-201ENST00000364680 107 ntBASIC2.21□□□□□ -2.06
PHF8Q9UPP1 MIR548V-201ENST00000584165 80 ntBASIC2.21□□□□□ -2.06
PHF8Q9UPP1 SNORD60.1-201ENST00000362451 73 ntBASIC2.2□□□□□ -2.06
PHF8Q9UPP1 Y_RNA.224-201ENST00000364308 111 ntBASIC2.2□□□□□ -2.06
PHF8Q9UPP1 RNU6-1110P-201ENST00000516462 101 ntBASIC2.2□□□□□ -2.06
PHF8Q9UPP1 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.2□□□□□ -2.06
PHF8Q9UPP1 MIR6504-201ENST00000613520 61 ntBASIC2.2□□□□□ -2.06
PHF8Q9UPP1 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
PHF8Q9UPP1 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
PHF8Q9UPP1 SNORA67.6-201ENST00000391093 99 ntBASIC2.18□□□□□ -2.06
PHF8Q9UPP1 MIR1323-201ENST00000408090 73 ntBASIC2.18□□□□□ -2.06
PHF8Q9UPP1 AC002429.1-201ENST00000437672 148 ntBASIC2.18□□□□□ -2.06
PHF8Q9UPP1 AL157398.1-201ENST00000452981 186 ntBASIC2.18□□□□□ -2.06
PHF8Q9UPP1 RNA5SP47-201ENST00000517230 109 ntBASIC2.18□□□□□ -2.06
PHF8Q9UPP1 SNORA8.2-201ENST00000384372 139 ntBASIC2.17□□□□□ -2.06
PHF8Q9UPP1 MIR4421-201ENST00000578133 69 ntBASIC2.17□□□□□ -2.06
PHF8Q9UPP1 SNORD18A-201ENST00000363753 72 ntBASIC2.16□□□□□ -2.06
PHF8Q9UPP1 SNORD48-201ENST00000364953 64 ntBASIC2.16□□□□□ -2.06
PHF8Q9UPP1 RNU6-936P-201ENST00000384005 107 ntBASIC2.16□□□□□ -2.06
PHF8Q9UPP1 MIR222-201ENST00000384992 110 ntBASIC2.16□□□□□ -2.06
PHF8Q9UPP1 SNORD113-2-201ENST00000391082 72 ntBASIC2.16□□□□□ -2.06
PHF8Q9UPP1 snoU13.18-201ENST00000459483 104 ntBASIC2.16□□□□□ -2.06
PHF8Q9UPP1 MIR548C-201ENST00000384815 97 ntBASIC2.15□□□□□ -2.07
PHF8Q9UPP1 SNORD105-201ENST00000386910 85 ntBASIC2.15□□□□□ -2.07
PHF8Q9UPP1 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
PHF8Q9UPP1 SNORA15B-2-201ENST00000384058 135 ntBASIC2.14□□□□□ -2.07
PHF8Q9UPP1 SNORA15B-1-201ENST00000384334 135 ntBASIC2.14□□□□□ -2.07
PHF8Q9UPP1 MIR517C-201ENST00000385103 95 ntBASIC2.14□□□□□ -2.07
PHF8Q9UPP1 SNORA75.1-201ENST00000391130 148 ntBASIC2.14□□□□□ -2.07
PHF8Q9UPP1 FABP5P4-201ENST00000437203 171 ntBASIC2.14□□□□□ -2.07
PHF8Q9UPP1 RNA5SP364-201ENST00000516938 78 ntBASIC2.14□□□□□ -2.07
PHF8Q9UPP1 SNORD113-4-201ENST00000364802 75 ntBASIC2.13□□□□□ -2.07
PHF8Q9UPP1 RNU6-1184P-201ENST00000384588 108 ntBASIC2.13□□□□□ -2.07
PHF8Q9UPP1 MIR630-201ENST00000384957 97 ntBASIC2.13□□□□□ -2.07
PHF8Q9UPP1 MIR517B-201ENST00000385102 67 ntBASIC2.13□□□□□ -2.07
PHF8Q9UPP1 U7.7-201ENST00000459276 60 ntBASIC2.13□□□□□ -2.07
PHF8Q9UPP1 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 244 ms