Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 SNORD114-15-201ENST00000364687 72 ntBASIC-0.73□□□□□ -2.53
CHCHD3Q9NX63 MIR451A-201ENST00000385059 72 ntBASIC-0.73□□□□□ -2.53
CHCHD3Q9NX63 RNU6-257P-201ENST00000410238 98 ntBASIC-0.73□□□□□ -2.53
CHCHD3Q9NX63 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.73□□□□□ -2.53
CHCHD3Q9NX63 U6.95-201ENST00000636931 70 ntBASIC-0.73□□□□□ -2.53
CHCHD3Q9NX63 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.74□□□□□ -2.53
CHCHD3Q9NX63 SNORD50.2-201ENST00000365465 70 ntBASIC-0.74□□□□□ -2.53
CHCHD3Q9NX63 RNU6-900P-201ENST00000384498 102 ntBASIC-0.74□□□□□ -2.53
CHCHD3Q9NX63 SNORA32.3-201ENST00000384772 121 ntBASIC-0.74□□□□□ -2.53
CHCHD3Q9NX63 RNA5SP272-201ENST00000516095 111 ntBASIC-0.74□□□□□ -2.53
CHCHD3Q9NX63 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.74□□□□□ -2.53
CHCHD3Q9NX63 AC068339.1-201ENST00000526965 141 ntBASIC-0.74□□□□□ -2.53
CHCHD3Q9NX63 uc_338.36-201ENST00000622331 158 ntBASIC-0.74□□□□□ -2.53
CHCHD3Q9NX63 SNORD75.1-201ENST00000408373 60 ntBASIC-0.75□□□□□ -2.53
CHCHD3Q9NX63 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.75□□□□□ -2.53
CHCHD3Q9NX63 RNU6-75P-201ENST00000515944 104 ntBASIC-0.75□□□□□ -2.53
CHCHD3Q9NX63 SNORA40.17-201ENST00000517256 115 ntBASIC-0.75□□□□□ -2.53
CHCHD3Q9NX63 MIR4536-1-201ENST00000583537 88 ntBASIC-0.75□□□□□ -2.53
CHCHD3Q9NX63 AC093726.3-201ENST00000637588 150 ntBASIC-0.75□□□□□ -2.53
CHCHD3Q9NX63 RNU6-80P-201ENST00000384195 107 ntBASIC-0.76□□□□□ -2.53
CHCHD3Q9NX63 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.76□□□□□ -2.53
CHCHD3Q9NX63 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.76□□□□□ -2.53
CHCHD3Q9NX63 snoU13.19-201ENST00000459148 104 ntBASIC-0.76□□□□□ -2.53
CHCHD3Q9NX63 AL035470.1-201ENST00000622571 220 ntBASIC-0.76□□□□□ -2.53
CHCHD3Q9NX63 MIR3914-2-201ENST00000637339 95 ntBASIC-0.76□□□□□ -2.53
CHCHD3Q9NX63 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.77□□□□□ -2.53
CHCHD3Q9NX63 RNU6-284P-201ENST00000411105 106 ntBASIC-0.77□□□□□ -2.53
CHCHD3Q9NX63 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.77□□□□□ -2.53
CHCHD3Q9NX63 MIR4432-201ENST00000581823 84 ntBASIC-0.77□□□□□ -2.53
CHCHD3Q9NX63 AC025521.1-201ENST00000621624 286 ntBASIC-0.77□□□□□ -2.53
CHCHD3Q9NX63 MIR9-2-201ENST00000384838 87 ntBASIC-0.78□□□□□ -2.53
CHCHD3Q9NX63 MIR548U-201ENST00000390728 81 ntBASIC-0.78□□□□□ -2.53
CHCHD3Q9NX63 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.78□□□□□ -2.53
CHCHD3Q9NX63 SNORD115-25-201ENST00000362619 82 ntBASIC-0.79□□□□□ -2.54
CHCHD3Q9NX63 RNU6-644P-201ENST00000391155 98 ntBASIC-0.79□□□□□ -2.54
CHCHD3Q9NX63 MIR5009-201ENST00000578736 100 ntBASIC-0.79□□□□□ -2.54
CHCHD3Q9NX63 RNU6-86P-201ENST00000606534 107 ntBASIC-0.79□□□□□ -2.54
CHCHD3Q9NX63 MIR196A2-201ENST00000385189 110 ntBASIC-0.8□□□□□ -2.54
CHCHD3Q9NX63 AP000676.1-201ENST00000533307 52 ntBASIC-0.8□□□□□ -2.54
CHCHD3Q9NX63 MIR3681-201ENST00000580089 72 ntBASIC-0.8□□□□□ -2.54
CHCHD3Q9NX63 SNORD114-11-201ENST00000363738 75 ntBASIC-0.81□□□□□ -2.54
CHCHD3Q9NX63 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.81□□□□□ -2.54
CHCHD3Q9NX63 SNORA13-201ENST00000458790 133 ntBASIC-0.81□□□□□ -2.54
CHCHD3Q9NX63 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.81□□□□□ -2.54
CHCHD3Q9NX63 AL513043.2-201ENST00000573941 143 ntBASIC-0.81□□□□□ -2.54
CHCHD3Q9NX63 SNORD114-14-201ENST00000362723 75 ntBASIC-0.82□□□□□ -2.54
CHCHD3Q9NX63 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.82□□□□□ -2.54
CHCHD3Q9NX63 RNU4-36P-201ENST00000364294 144 ntBASIC-0.82□□□□□ -2.54
CHCHD3Q9NX63 RNU6-901P-201ENST00000384593 106 ntBASIC-0.82□□□□□ -2.54
CHCHD3Q9NX63 RNU6-813P-201ENST00000384691 107 ntBASIC-0.82□□□□□ -2.54
CHCHD3Q9NX63 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.82□□□□□ -2.54
CHCHD3Q9NX63 MIR548A3-201ENST00000385297 97 ntBASIC-0.83□□□□□ -2.54
CHCHD3Q9NX63 AC090425.1-201ENST00000610007 140 ntBASIC-0.83□□□□□ -2.54
CHCHD3Q9NX63 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.83□□□□□ -2.54
CHCHD3Q9NX63 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.84□□□□□ -2.54
CHCHD3Q9NX63 RNY4P3-201ENST00000365254 95 ntBASIC-0.84□□□□□ -2.54
CHCHD3Q9NX63 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.84□□□□□ -2.54
CHCHD3Q9NX63 RNU6-54P-201ENST00000365563 107 ntBASIC-0.84□□□□□ -2.54
CHCHD3Q9NX63 RNU7-107P-201ENST00000459121 61 ntBASIC-0.84□□□□□ -2.54
CHCHD3Q9NX63 RNU7-55P-201ENST00000459426 62 ntBASIC-0.84□□□□□ -2.54
CHCHD3Q9NX63 AC114755.3-201ENST00000481111 251 ntBASIC-0.84□□□□□ -2.54
CHCHD3Q9NX63 RNU6-971P-201ENST00000516920 106 ntBASIC-0.84□□□□□ -2.54
CHCHD3Q9NX63 SNORD95.1-201ENST00000364099 68 ntBASIC-0.85□□□□□ -2.55
CHCHD3Q9NX63 RNU6-412P-201ENST00000516434 106 ntBASIC-0.85□□□□□ -2.55
CHCHD3Q9NX63 RNU6-255P-201ENST00000516957 105 ntBASIC-0.85□□□□□ -2.55
CHCHD3Q9NX63 SNORA63.2-201ENST00000362603 126 ntBASIC-0.86□□□□□ -2.55
CHCHD3Q9NX63 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.86□□□□□ -2.55
CHCHD3Q9NX63 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.86□□□□□ -2.55
CHCHD3Q9NX63 SNORA49-201ENST00000386157 136 ntBASIC-0.86□□□□□ -2.55
CHCHD3Q9NX63 RNU4-63P-201ENST00000411313 118 ntBASIC-0.86□□□□□ -2.55
CHCHD3Q9NX63 RNU7-85P-201ENST00000458851 63 ntBASIC-0.86□□□□□ -2.55
CHCHD3Q9NX63 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.87□□□□□ -2.55
CHCHD3Q9NX63 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.87□□□□□ -2.55
CHCHD3Q9NX63 SNORD33.1-201ENST00000516213 88 ntBASIC-0.87□□□□□ -2.55
CHCHD3Q9NX63 RNU6-659P-201ENST00000516454 104 ntBASIC-0.87□□□□□ -2.55
CHCHD3Q9NX63 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.88□□□□□ -2.55
CHCHD3Q9NX63 MIR548E-201ENST00000408287 88 ntBASIC-0.88□□□□□ -2.55
CHCHD3Q9NX63 AC021146.6-201ENST00000514659 117 ntBASIC-0.88□□□□□ -2.55
CHCHD3Q9NX63 RNU6-880P-201ENST00000384526 107 ntBASIC-0.89□□□□□ -2.55
CHCHD3Q9NX63 MIR548A1-201ENST00000385041 97 ntBASIC-0.89□□□□□ -2.55
CHCHD3Q9NX63 FGF7P7-201ENST00000514120 227 ntBASIC-0.89□□□□□ -2.55
CHCHD3Q9NX63 AC103810.7-201ENST00000607821 91 ntBASIC-0.89□□□□□ -2.55
CHCHD3Q9NX63 RNU6-973P-201ENST00000364690 107 ntBASIC-0.9□□□□□ -2.55
CHCHD3Q9NX63 RNU6-30P-201ENST00000384561 107 ntBASIC-0.9□□□□□ -2.55
CHCHD3Q9NX63 MIR204-201ENST00000385200 110 ntBASIC-0.9□□□□□ -2.55
CHCHD3Q9NX63 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.9□□□□□ -2.55
CHCHD3Q9NX63 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.9□□□□□ -2.55
CHCHD3Q9NX63 RNU6-346P-201ENST00000516288 111 ntBASIC-0.9□□□□□ -2.55
CHCHD3Q9NX63 RNA5SP67-201ENST00000516422 131 ntBASIC-0.9□□□□□ -2.55
CHCHD3Q9NX63 RNU6-62P-201ENST00000516526 102 ntBASIC-0.9□□□□□ -2.55
CHCHD3Q9NX63 MIR3064-201ENST00000581130 66 ntBASIC-0.9□□□□□ -2.55
CHCHD3Q9NX63 AC104996.3-201ENST00000590718 94 ntBASIC-0.9□□□□□ -2.55
CHCHD3Q9NX63 AC145423.2-201ENST00000610631 239 ntBASIC-0.9□□□□□ -2.55
CHCHD3Q9NX63 RNU6-502P-201ENST00000362419 108 ntBASIC-0.91□□□□□ -2.56
CHCHD3Q9NX63 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.91□□□□□ -2.56
CHCHD3Q9NX63 MIR3613-201ENST00000579844 87 ntBASIC-0.91□□□□□ -2.56
CHCHD3Q9NX63 SNORD56B-201ENST00000384713 71 ntBASIC-0.92□□□□□ -2.56
CHCHD3Q9NX63 RNU6-907P-201ENST00000390924 102 ntBASIC-0.92□□□□□ -2.56
CHCHD3Q9NX63 RNU6-519P-201ENST00000410590 108 ntBASIC-0.92□□□□□ -2.56
CHCHD3Q9NX63 RNU6-762P-201ENST00000517107 102 ntBASIC-0.92□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 289.3 ms