Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 Y_RNA.47-201ENST00000362697 108 ntBASIC-1.06□□□□□ -2.58
TREX1Q9NSU2 SNORD115-33-201ENST00000363723 82 ntBASIC-1.06□□□□□ -2.58
TREX1Q9NSU2 Y_RNA.435-201ENST00000384095 112 ntBASIC-1.06□□□□□ -2.58
TREX1Q9NSU2 RNU6-239P-201ENST00000390990 99 ntBASIC-1.06□□□□□ -2.58
TREX1Q9NSU2 SNORA26.4-201ENST00000391188 123 ntBASIC-1.06□□□□□ -2.58
TREX1Q9NSU2 MIR889-201ENST00000401280 79 ntBASIC-1.06□□□□□ -2.58
TREX1Q9NSU2 RNU4-71P-201ENST00000516258 113 ntBASIC-1.06□□□□□ -2.58
TREX1Q9NSU2 AC090617.8-201ENST00000623339 167 ntBASIC-1.06□□□□□ -2.58
TREX1Q9NSU2 Y_RNA.20-201ENST00000362479 113 ntBASIC-1.07□□□□□ -2.58
TREX1Q9NSU2 RNU6-1020P-201ENST00000363684 107 ntBASIC-1.07□□□□□ -2.58
TREX1Q9NSU2 SNORD58.1-201ENST00000391313 66 ntBASIC-1.07□□□□□ -2.58
TREX1Q9NSU2 MIR548F4-201ENST00000408515 105 ntBASIC-1.07□□□□□ -2.58
TREX1Q9NSU2 RNU4-61P-201ENST00000411243 107 ntBASIC-1.07□□□□□ -2.58
TREX1Q9NSU2 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.07□□□□□ -2.58
TREX1Q9NSU2 RNU6-1219P-201ENST00000516143 112 ntBASIC-1.07□□□□□ -2.58
TREX1Q9NSU2 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.07□□□□□ -2.58
TREX1Q9NSU2 MIR6502-201ENST00000617296 76 ntBASIC-1.07□□□□□ -2.58
TREX1Q9NSU2 MIR198-201ENST00000637333 62 ntBASIC-1.07□□□□□ -2.58
TREX1Q9NSU2 Y_RNA.83-201ENST00000363005 113 ntBASIC-1.08□□□□□ -2.58
TREX1Q9NSU2 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.08□□□□□ -2.58
TREX1Q9NSU2 SNORD38.1-201ENST00000363863 68 ntBASIC-1.08□□□□□ -2.58
TREX1Q9NSU2 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.08□□□□□ -2.58
TREX1Q9NSU2 RNU2-51P-201ENST00000410708 197 ntBASIC-1.08□□□□□ -2.58
TREX1Q9NSU2 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.08□□□□□ -2.58
TREX1Q9NSU2 RNA5SP26-201ENST00000362406 119 ntBASIC-1.09□□□□□ -2.58
TREX1Q9NSU2 RNU6-924P-201ENST00000362926 108 ntBASIC-1.09□□□□□ -2.58
TREX1Q9NSU2 Y_RNA.149-201ENST00000363558 117 ntBASIC-1.09□□□□□ -2.58
TREX1Q9NSU2 RNU6-1153P-201ENST00000516760 105 ntBASIC-1.09□□□□□ -2.58
TREX1Q9NSU2 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.09□□□□□ -2.58
TREX1Q9NSU2 U6.96-201ENST00000636425 70 ntBASIC-1.09□□□□□ -2.58
TREX1Q9NSU2 RNU6-495P-201ENST00000362995 107 ntBASIC-1.1□□□□□ -2.59
TREX1Q9NSU2 RNU6-990P-201ENST00000364385 104 ntBASIC-1.1□□□□□ -2.59
TREX1Q9NSU2 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.1□□□□□ -2.59
TREX1Q9NSU2 RNU6-867P-201ENST00000364956 107 ntBASIC-1.1□□□□□ -2.59
TREX1Q9NSU2 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.1□□□□□ -2.59
TREX1Q9NSU2 RNU6-1227P-201ENST00000383981 107 ntBASIC-1.1□□□□□ -2.59
TREX1Q9NSU2 Y_RNA.478-201ENST00000384358 107 ntBASIC-1.1□□□□□ -2.59
TREX1Q9NSU2 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.1□□□□□ -2.59
TREX1Q9NSU2 RNU6-75P-201ENST00000515944 104 ntBASIC-1.1□□□□□ -2.59
TREX1Q9NSU2 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-1.1□□□□□ -2.59
TREX1Q9NSU2 MIR4520-1-201ENST00000582609 70 ntBASIC-1.1□□□□□ -2.59
TREX1Q9NSU2 MIR6129-201ENST00000616087 109 ntBASIC-1.1□□□□□ -2.59
TREX1Q9NSU2 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.1□□□□□ -2.59
TREX1Q9NSU2 AC091912.2-201ENST00000624798 167 ntBASIC-1.1□□□□□ -2.59
TREX1Q9NSU2 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.1□□□□□ -2.59
TREX1Q9NSU2 RNU6-1313P-201ENST00000362622 102 ntBASIC-1.11□□□□□ -2.59
TREX1Q9NSU2 SNORD115-22-201ENST00000364456 82 ntBASIC-1.11□□□□□ -2.59
TREX1Q9NSU2 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.11□□□□□ -2.59
TREX1Q9NSU2 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.11□□□□□ -2.59
TREX1Q9NSU2 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.11□□□□□ -2.59
TREX1Q9NSU2 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.11□□□□□ -2.59
TREX1Q9NSU2 AC021146.9-201ENST00000512503 156 ntBASIC-1.11□□□□□ -2.59
TREX1Q9NSU2 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.12□□□□□ -2.59
TREX1Q9NSU2 RNU6-164P-201ENST00000364604 103 ntBASIC-1.12□□□□□ -2.59
TREX1Q9NSU2 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.12□□□□□ -2.59
TREX1Q9NSU2 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.12□□□□□ -2.59
TREX1Q9NSU2 RNU7-121P-201ENST00000516604 62 ntBASIC-1.12□□□□□ -2.59
TREX1Q9NSU2 RNU6-719P-201ENST00000516671 104 ntBASIC-1.12□□□□□ -2.59
TREX1Q9NSU2 AC022559.1-201ENST00000520905 205 ntBASIC-1.12□□□□□ -2.59
TREX1Q9NSU2 AL117187.1-201ENST00000555482 181 ntBASIC-1.12□□□□□ -2.59
TREX1Q9NSU2 MIR3128-201ENST00000581957 66 ntBASIC-1.12□□□□□ -2.59
TREX1Q9NSU2 AC008737.2-201ENST00000599446 118 ntBASIC-1.12□□□□□ -2.59
TREX1Q9NSU2 Y_RNA.11-201ENST00000362375 109 ntBASIC-1.13□□□□□ -2.59
TREX1Q9NSU2 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.13□□□□□ -2.59
TREX1Q9NSU2 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.13□□□□□ -2.59
TREX1Q9NSU2 Y_RNA.350-201ENST00000365409 98 ntBASIC-1.13□□□□□ -2.59
TREX1Q9NSU2 RNU6-1160P-201ENST00000384546 104 ntBASIC-1.13□□□□□ -2.59
TREX1Q9NSU2 MIR1263-201ENST00000408324 86 ntBASIC-1.13□□□□□ -2.59
TREX1Q9NSU2 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.13□□□□□ -2.59
TREX1Q9NSU2 MIR6874-201ENST00000635894 71 ntBASIC-1.13□□□□□ -2.59
TREX1Q9NSU2 RNU6-363P-201ENST00000362895 105 ntBASIC-1.14□□□□□ -2.59
TREX1Q9NSU2 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.14□□□□□ -2.59
TREX1Q9NSU2 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.14□□□□□ -2.59
TREX1Q9NSU2 Y_RNA.200-201ENST00000364018 102 ntBASIC-1.14□□□□□ -2.59
TREX1Q9NSU2 RNU7-24P-201ENST00000458867 62 ntBASIC-1.14□□□□□ -2.59
TREX1Q9NSU2 FGF7P7-201ENST00000514120 227 ntBASIC-1.14□□□□□ -2.59
TREX1Q9NSU2 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.14□□□□□ -2.59
TREX1Q9NSU2 RNU6-111P-201ENST00000517179 105 ntBASIC-1.14□□□□□ -2.59
TREX1Q9NSU2 MIR3121-201ENST00000579680 77 ntBASIC-1.14□□□□□ -2.59
TREX1Q9NSU2 RNU6-409P-201ENST00000384114 104 ntBASIC-1.15□□□□□ -2.59
TREX1Q9NSU2 MIR548D2-201ENST00000384955 97 ntBASIC-1.15□□□□□ -2.59
TREX1Q9NSU2 MIR1255B2-201ENST00000408618 67 ntBASIC-1.15□□□□□ -2.59
TREX1Q9NSU2 AL353691.2-201ENST00000443795 59 ntBASIC-1.15□□□□□ -2.59
TREX1Q9NSU2 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.15□□□□□ -2.59
TREX1Q9NSU2 SNORA2.1-201ENST00000363089 137 ntBASIC-1.16□□□□□ -2.6
TREX1Q9NSU2 RNU6-226P-201ENST00000363778 107 ntBASIC-1.16□□□□□ -2.6
TREX1Q9NSU2 SNORA20.1-201ENST00000364790 130 ntBASIC-1.16□□□□□ -2.6
TREX1Q9NSU2 SNORA24B-201ENST00000384176 131 ntBASIC-1.16□□□□□ -2.6
TREX1Q9NSU2 Y_RNA.459-201ENST00000384251 102 ntBASIC-1.16□□□□□ -2.6
TREX1Q9NSU2 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.16□□□□□ -2.6
TREX1Q9NSU2 AL117351.2-201ENST00000513571 157 ntBASIC-1.16□□□□□ -2.6
TREX1Q9NSU2 RNU6-412P-201ENST00000516434 106 ntBASIC-1.16□□□□□ -2.6
TREX1Q9NSU2 RNA5SP461-201ENST00000516451 104 ntBASIC-1.16□□□□□ -2.6
TREX1Q9NSU2 AC130289.1-201ENST00000577321 73 ntBASIC-1.16□□□□□ -2.6
TREX1Q9NSU2 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.16□□□□□ -2.6
TREX1Q9NSU2 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.16□□□□□ -2.6
TREX1Q9NSU2 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.17□□□□□ -2.6
TREX1Q9NSU2 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.17□□□□□ -2.6
TREX1Q9NSU2 SNORA63.2-201ENST00000362603 126 ntBASIC-1.17□□□□□ -2.6
TREX1Q9NSU2 RNU6-797P-201ENST00000363101 109 ntBASIC-1.17□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 175.6 ms