Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 RNU6-1039P-201ENST00000383931 107 ntBASIC1.24□□□□□ -2.21
VPS11Q9H270 MIR203A-201ENST00000384836 110 ntBASIC1.24□□□□□ -2.21
VPS11Q9H270 RNU7-95P-201ENST00000459222 64 ntBASIC1.24□□□□□ -2.21
VPS11Q9H270 RNU6-977P-201ENST00000516411 103 ntBASIC1.24□□□□□ -2.21
VPS11Q9H270 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
VPS11Q9H270 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.24□□□□□ -2.21
VPS11Q9H270 MIR519E-201ENST00000385075 84 ntBASIC1.23□□□□□ -2.21
VPS11Q9H270 AC079150.2-201ENST00000443733 78 ntBASIC1.23□□□□□ -2.21
VPS11Q9H270 AL691482.2-201ENST00000457453 84 ntBASIC1.23□□□□□ -2.21
VPS11Q9H270 SNORD42B-201ENST00000458893 67 ntBASIC1.23□□□□□ -2.21
VPS11Q9H270 MIR548O2-201ENST00000616090 70 ntBASIC1.23□□□□□ -2.21
VPS11Q9H270 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.22□□□□□ -2.21
VPS11Q9H270 RNU1-119P-201ENST00000391122 165 ntBASIC1.22□□□□□ -2.21
VPS11Q9H270 RNU7-104P-201ENST00000459398 79 ntBASIC1.22□□□□□ -2.21
VPS11Q9H270 Y_RNA.676-201ENST00000516393 96 ntBASIC1.22□□□□□ -2.21
VPS11Q9H270 snoU13.31-201ENST00000607291 104 ntBASIC1.22□□□□□ -2.21
VPS11Q9H270 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.22□□□□□ -2.21
VPS11Q9H270 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.22□□□□□ -2.21
VPS11Q9H270 SNORD114-24-201ENST00000365029 72 ntBASIC1.21□□□□□ -2.22
VPS11Q9H270 MIR617-201ENST00000385030 97 ntBASIC1.21□□□□□ -2.22
VPS11Q9H270 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.21□□□□□ -2.22
VPS11Q9H270 MIR1827-201ENST00000408549 66 ntBASIC1.21□□□□□ -2.22
VPS11Q9H270 RNU6-994P-201ENST00000410507 111 ntBASIC1.21□□□□□ -2.22
VPS11Q9H270 MIR4498-201ENST00000577599 66 ntBASIC1.21□□□□□ -2.22
VPS11Q9H270 MIR3660-201ENST00000584845 100 ntBASIC1.21□□□□□ -2.22
VPS11Q9H270 AL359821.1-201ENST00000605519 182 ntBASIC1.21□□□□□ -2.22
VPS11Q9H270 MIR6509-201ENST00000614603 85 ntBASIC1.21□□□□□ -2.22
VPS11Q9H270 RMST_2.1-201ENST00000617263 136 ntBASIC1.21□□□□□ -2.22
VPS11Q9H270 AC073869.9-201ENST00000641610 120 ntBASIC1.21□□□□□ -2.22
VPS11Q9H270 MIR520F-201ENST00000384824 87 ntBASIC1.2□□□□□ -2.22
VPS11Q9H270 MIR100-201ENST00000385259 80 ntBASIC1.2□□□□□ -2.22
VPS11Q9H270 RNU6-1053P-201ENST00000515930 101 ntBASIC1.2□□□□□ -2.22
VPS11Q9H270 MIR3657-201ENST00000584818 117 ntBASIC1.2□□□□□ -2.22
VPS11Q9H270 MIR4781-201ENST00000585250 76 ntBASIC1.2□□□□□ -2.22
VPS11Q9H270 AL136317.1-201ENST00000612653 226 ntBASIC1.2□□□□□ -2.22
VPS11Q9H270 AC069503.3-201ENST00000618674 145 ntBASIC1.2□□□□□ -2.22
VPS11Q9H270 SNORA7.1-201ENST00000363750 139 ntBASIC1.19□□□□□ -2.22
VPS11Q9H270 Y_RNA.174-201ENST00000363781 105 ntBASIC1.19□□□□□ -2.22
VPS11Q9H270 Y_RNA.375-201ENST00000365625 101 ntBASIC1.19□□□□□ -2.22
VPS11Q9H270 MIR644A-201ENST00000385262 94 ntBASIC1.19□□□□□ -2.22
VPS11Q9H270 SNORD124-201ENST00000459577 104 ntBASIC1.19□□□□□ -2.22
VPS11Q9H270 OR2A41P-201ENST00000473586 105 ntBASIC1.19□□□□□ -2.22
VPS11Q9H270 MIR4421-201ENST00000578133 69 ntBASIC1.19□□□□□ -2.22
VPS11Q9H270 RNU6-829P-201ENST00000363700 112 ntBASIC1.18□□□□□ -2.22
VPS11Q9H270 Y_RNA.164-201ENST00000363709 102 ntBASIC1.18□□□□□ -2.22
VPS11Q9H270 RNU6V-201ENST00000384105 107 ntBASIC1.18□□□□□ -2.22
VPS11Q9H270 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.18□□□□□ -2.22
VPS11Q9H270 FABP5P4-201ENST00000437203 171 ntBASIC1.18□□□□□ -2.22
VPS11Q9H270 AC092634.7-201ENST00000621022 103 ntBASIC1.18□□□□□ -2.22
VPS11Q9H270 MIR1-1-201ENST00000362147 71 ntBASIC1.17□□□□□ -2.22
VPS11Q9H270 RNU6-990P-201ENST00000364385 104 ntBASIC1.17□□□□□ -2.22
VPS11Q9H270 RNU6-645P-201ENST00000364649 106 ntBASIC1.17□□□□□ -2.22
VPS11Q9H270 MIR1285-1-201ENST00000408593 84 ntBASIC1.17□□□□□ -2.22
VPS11Q9H270 AC067940.1-201ENST00000458411 300 ntBASIC1.17□□□□□ -2.22
VPS11Q9H270 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.17□□□□□ -2.22
VPS11Q9H270 RNU6-668P-201ENST00000364180 107 ntBASIC1.16□□□□□ -2.22
VPS11Q9H270 RNU6-141P-201ENST00000410499 105 ntBASIC1.16□□□□□ -2.22
VPS11Q9H270 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
VPS11Q9H270 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
VPS11Q9H270 AC002350.1-201ENST00000490759 375 ntBASIC1.15□□□□□ -2.23
VPS11Q9H270 RNU6-656P-201ENST00000516785 107 ntBASIC1.15□□□□□ -2.23
VPS11Q9H270 MIR4661-201ENST00000582720 75 ntBASIC1.15□□□□□ -2.23
VPS11Q9H270 RNA5SP192-201ENST00000364404 120 ntBASIC1.14□□□□□ -2.23
VPS11Q9H270 Y_RNA.236-201ENST00000364427 111 ntBASIC1.14□□□□□ -2.23
VPS11Q9H270 MIR216B-201ENST00000390186 82 ntBASIC1.14□□□□□ -2.23
VPS11Q9H270 SNORD41.1-201ENST00000391000 69 ntBASIC1.14□□□□□ -2.23
VPS11Q9H270 MTND4LP1-201ENST00000446263 157 ntBASIC1.14□□□□□ -2.23
VPS11Q9H270 AL353770.2-201ENST00000620024 78 ntBASIC1.14□□□□□ -2.23
VPS11Q9H270 AC244669.1-204ENST00000621564 178 ntBASIC1.14□□□□□ -2.23
VPS11Q9H270 AC067863.3-201ENST00000624172 122 ntBASIC1.14□□□□□ -2.23
VPS11Q9H270 RNU6-446P-201ENST00000362827 106 ntBASIC1.13□□□□□ -2.23
VPS11Q9H270 RNU6-1079P-201ENST00000362861 110 ntBASIC1.13□□□□□ -2.23
VPS11Q9H270 RNU6-260P-201ENST00000384092 107 ntBASIC1.13□□□□□ -2.23
VPS11Q9H270 SNORD28-201ENST00000384706 75 ntBASIC1.13□□□□□ -2.23
VPS11Q9H270 MT-TY-201ENST00000387409 66 ntBASIC1.13□□□□□ -2.23
VPS11Q9H270 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
VPS11Q9H270 RNU6-321P-201ENST00000410912 106 ntBASIC1.13□□□□□ -2.23
VPS11Q9H270 TRMT112P2-201ENST00000512910 132 ntBASIC1.13□□□□□ -2.23
VPS11Q9H270 RNU6-542P-201ENST00000516405 103 ntBASIC1.13□□□□□ -2.23
VPS11Q9H270 RNA5SP147-201ENST00000516493 109 ntBASIC1.13□□□□□ -2.23
VPS11Q9H270 SNORA25.5-201ENST00000363782 126 ntBASIC1.12□□□□□ -2.23
VPS11Q9H270 Y_RNA.327-201ENST00000365201 102 ntBASIC1.12□□□□□ -2.23
VPS11Q9H270 SCARNA21.1-201ENST00000515996 128 ntBASIC1.12□□□□□ -2.23
VPS11Q9H270 SNORA2.1-201ENST00000363089 137 ntBASIC1.11□□□□□ -2.23
VPS11Q9H270 RNU6-614P-201ENST00000384369 107 ntBASIC1.11□□□□□ -2.23
VPS11Q9H270 RNA5SP299-201ENST00000391203 116 ntBASIC1.11□□□□□ -2.23
VPS11Q9H270 MIR4639-201ENST00000584938 69 ntBASIC1.11□□□□□ -2.23
VPS11Q9H270 U6.59-201ENST00000615686 107 ntBASIC1.11□□□□□ -2.23
VPS11Q9H270 SNORD18A-201ENST00000363753 72 ntBASIC1.1□□□□□ -2.23
VPS11Q9H270 RNU6-726P-201ENST00000364680 107 ntBASIC1.1□□□□□ -2.23
VPS11Q9H270 MIR7-2-201ENST00000384970 110 ntBASIC1.1□□□□□ -2.23
VPS11Q9H270 RNA5SP247-201ENST00000411181 105 ntBASIC1.1□□□□□ -2.23
VPS11Q9H270 U7.7-201ENST00000459276 60 ntBASIC1.1□□□□□ -2.23
VPS11Q9H270 RNA5SP255-201ENST00000516370 107 ntBASIC1.1□□□□□ -2.23
VPS11Q9H270 RNA5SP47-201ENST00000517230 109 ntBASIC1.1□□□□□ -2.23
VPS11Q9H270 MIR466-201ENST00000580653 84 ntBASIC1.1□□□□□ -2.23
VPS11Q9H270 MIR6739-201ENST00000622461 75 ntBASIC1.1□□□□□ -2.23
VPS11Q9H270 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
VPS11Q9H270 SNORA75.1-201ENST00000391130 148 ntBASIC1.09□□□□□ -2.23
VPS11Q9H270 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 228.5 ms