Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 snoU13.17-201ENST00000458802 104 ntBASIC-1.04□□□□□ -2.58
ALX4Q9H161 RNU7-24P-201ENST00000458867 62 ntBASIC-1.04□□□□□ -2.58
ALX4Q9H161 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.04□□□□□ -2.58
ALX4Q9H161 MIR4770-201ENST00000579149 58 ntBASIC-1.04□□□□□ -2.58
ALX4Q9H161 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.04□□□□□ -2.58
ALX4Q9H161 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.04□□□□□ -2.58
ALX4Q9H161 U6.106-201ENST00000636360 105 ntBASIC-1.04□□□□□ -2.58
ALX4Q9H161 RNU6-363P-201ENST00000362895 105 ntBASIC-1.05□□□□□ -2.58
ALX4Q9H161 Y_RNA.75-201ENST00000362927 97 ntBASIC-1.05□□□□□ -2.58
ALX4Q9H161 RNU6-226P-201ENST00000363778 107 ntBASIC-1.05□□□□□ -2.58
ALX4Q9H161 Y_RNA.277-201ENST00000364754 102 ntBASIC-1.05□□□□□ -2.58
ALX4Q9H161 RNY4P28-201ENST00000365281 93 ntBASIC-1.05□□□□□ -2.58
ALX4Q9H161 SNORD18B-201ENST00000365659 72 ntBASIC-1.05□□□□□ -2.58
ALX4Q9H161 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.05□□□□□ -2.58
ALX4Q9H161 MIR548A1-201ENST00000385041 97 ntBASIC-1.05□□□□□ -2.58
ALX4Q9H161 SNORD90-201ENST00000391145 111 ntBASIC-1.05□□□□□ -2.58
ALX4Q9H161 SNORD75.2-201ENST00000408784 58 ntBASIC-1.05□□□□□ -2.58
ALX4Q9H161 Y_RNA.690-201ENST00000516603 95 ntBASIC-1.05□□□□□ -2.58
ALX4Q9H161 RNU6-1137P-201ENST00000517073 99 ntBASIC-1.05□□□□□ -2.58
ALX4Q9H161 MIR3163-201ENST00000581592 73 ntBASIC-1.05□□□□□ -2.58
ALX4Q9H161 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.05□□□□□ -2.58
ALX4Q9H161 U4.2-201ENST00000618561 85 ntBASIC-1.05□□□□□ -2.58
ALX4Q9H161 SNORA2.1-201ENST00000363089 137 ntBASIC-1.06□□□□□ -2.58
ALX4Q9H161 RNU6-164P-201ENST00000364604 103 ntBASIC-1.06□□□□□ -2.58
ALX4Q9H161 SNORD50.2-201ENST00000365465 70 ntBASIC-1.06□□□□□ -2.58
ALX4Q9H161 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.06□□□□□ -2.58
ALX4Q9H161 MT-TW-201ENST00000387382 68 ntBASIC-1.06□□□□□ -2.58
ALX4Q9H161 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.06□□□□□ -2.58
ALX4Q9H161 RNU6-65P-201ENST00000516332 98 ntBASIC-1.06□□□□□ -2.58
ALX4Q9H161 RNU6-412P-201ENST00000516434 106 ntBASIC-1.06□□□□□ -2.58
ALX4Q9H161 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.06□□□□□ -2.58
ALX4Q9H161 CYP3A54P-201ENST00000566950 75 ntBASIC-1.06□□□□□ -2.58
ALX4Q9H161 MIR4536-1-201ENST00000583537 88 ntBASIC-1.06□□□□□ -2.58
ALX4Q9H161 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.07□□□□□ -2.58
ALX4Q9H161 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.07□□□□□ -2.58
ALX4Q9H161 RNU6-260P-201ENST00000384092 107 ntBASIC-1.07□□□□□ -2.58
ALX4Q9H161 RNU6-80P-201ENST00000384195 107 ntBASIC-1.07□□□□□ -2.58
ALX4Q9H161 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.07□□□□□ -2.58
ALX4Q9H161 Y_RNA.483-201ENST00000384380 101 ntBASIC-1.07□□□□□ -2.58
ALX4Q9H161 MIR507-201ENST00000385234 94 ntBASIC-1.07□□□□□ -2.58
ALX4Q9H161 SNORD19-201ENST00000391191 68 ntBASIC-1.07□□□□□ -2.58
ALX4Q9H161 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.07□□□□□ -2.58
ALX4Q9H161 AL353691.2-201ENST00000443795 59 ntBASIC-1.07□□□□□ -2.58
ALX4Q9H161 RNA5SP147-201ENST00000516493 109 ntBASIC-1.07□□□□□ -2.58
ALX4Q9H161 AL442128.1-201ENST00000615151 90 ntBASIC-1.07□□□□□ -2.58
ALX4Q9H161 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.07□□□□□ -2.58
ALX4Q9H161 RNU6-151P-201ENST00000364158 107 ntBASIC-1.08□□□□□ -2.58
ALX4Q9H161 RNU6-382P-201ENST00000365181 106 ntBASIC-1.08□□□□□ -2.58
ALX4Q9H161 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.08□□□□□ -2.58
ALX4Q9H161 Y_RNA.461-201ENST00000384263 103 ntBASIC-1.08□□□□□ -2.58
ALX4Q9H161 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.08□□□□□ -2.58
ALX4Q9H161 MIR548AG1-201ENST00000579932 66 ntBASIC-1.08□□□□□ -2.58
ALX4Q9H161 MIR3064-201ENST00000581130 66 ntBASIC-1.08□□□□□ -2.58
ALX4Q9H161 MIR3171-201ENST00000584270 74 ntBASIC-1.08□□□□□ -2.58
ALX4Q9H161 MIR8062-201ENST00000621515 85 ntBASIC-1.08□□□□□ -2.58
ALX4Q9H161 RNU6-774P-201ENST00000363238 107 ntBASIC-1.09□□□□□ -2.58
ALX4Q9H161 Y_RNA.216-201ENST00000364205 93 ntBASIC-1.09□□□□□ -2.58
ALX4Q9H161 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.09□□□□□ -2.58
ALX4Q9H161 Y_RNA.337-201ENST00000365312 102 ntBASIC-1.09□□□□□ -2.58
ALX4Q9H161 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.09□□□□□ -2.58
ALX4Q9H161 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.09□□□□□ -2.58
ALX4Q9H161 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.09□□□□□ -2.58
ALX4Q9H161 Y_RNA.460-201ENST00000384255 102 ntBASIC-1.09□□□□□ -2.58
ALX4Q9H161 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.09□□□□□ -2.58
ALX4Q9H161 Y_RNA.509-201ENST00000384506 99 ntBASIC-1.09□□□□□ -2.58
ALX4Q9H161 Y_RNA.512-201ENST00000384518 102 ntBASIC-1.09□□□□□ -2.58
ALX4Q9H161 MIR203A-201ENST00000384836 110 ntBASIC-1.09□□□□□ -2.58
ALX4Q9H161 MIR548D2-201ENST00000384955 97 ntBASIC-1.09□□□□□ -2.58
ALX4Q9H161 MIR519A2-201ENST00000384990 87 ntBASIC-1.09□□□□□ -2.58
ALX4Q9H161 AC107027.2-201ENST00000512197 115 ntBASIC-1.09□□□□□ -2.58
ALX4Q9H161 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.09□□□□□ -2.58
ALX4Q9H161 MIR6844-201ENST00000637122 62 ntBASIC-1.09□□□□□ -2.58
ALX4Q9H161 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.1□□□□□ -2.59
ALX4Q9H161 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.1□□□□□ -2.59
ALX4Q9H161 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.1□□□□□ -2.59
ALX4Q9H161 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.1□□□□□ -2.59
ALX4Q9H161 Y_RNA.202-201ENST00000364083 110 ntBASIC-1.1□□□□□ -2.59
ALX4Q9H161 RNA5SP86-201ENST00000390869 98 ntBASIC-1.1□□□□□ -2.59
ALX4Q9H161 AL078595.1-201ENST00000404458 226 ntBASIC-1.1□□□□□ -2.59
ALX4Q9H161 AC090616.4-201ENST00000448026 115 ntBASIC-1.1□□□□□ -2.59
ALX4Q9H161 SNORD127-201ENST00000458892 86 ntBASIC-1.1□□□□□ -2.59
ALX4Q9H161 RNA5SP461-201ENST00000516451 104 ntBASIC-1.1□□□□□ -2.59
ALX4Q9H161 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.1□□□□□ -2.59
ALX4Q9H161 AL513043.2-201ENST00000573941 143 ntBASIC-1.1□□□□□ -2.59
ALX4Q9H161 MIR3646-201ENST00000578301 84 ntBASIC-1.1□□□□□ -2.59
ALX4Q9H161 Y_RNA.138-201ENST00000363462 102 ntBASIC-1.11□□□□□ -2.59
ALX4Q9H161 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.11□□□□□ -2.59
ALX4Q9H161 SNORD114-3-201ENST00000364969 75 ntBASIC-1.11□□□□□ -2.59
ALX4Q9H161 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.11□□□□□ -2.59
ALX4Q9H161 RNU6-409P-201ENST00000384114 104 ntBASIC-1.11□□□□□ -2.59
ALX4Q9H161 MIR1207-201ENST00000408249 87 ntBASIC-1.11□□□□□ -2.59
ALX4Q9H161 RPL35AP4-201ENST00000412007 102 ntBASIC-1.11□□□□□ -2.59
ALX4Q9H161 RNU6-732P-201ENST00000516033 103 ntBASIC-1.11□□□□□ -2.59
ALX4Q9H161 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.11□□□□□ -2.59
ALX4Q9H161 MIR3657-201ENST00000584818 117 ntBASIC-1.11□□□□□ -2.59
ALX4Q9H161 AC104996.3-201ENST00000590718 94 ntBASIC-1.11□□□□□ -2.59
ALX4Q9H161 MIR3658-201ENST00000636291 56 ntBASIC-1.11□□□□□ -2.59
ALX4Q9H161 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.11□□□□□ -2.59
ALX4Q9H161 MIR365A-201ENST00000362260 87 ntBASIC-1.12□□□□□ -2.59
ALX4Q9H161 RNU6-824P-201ENST00000363724 104 ntBASIC-1.12□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms