Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 MIR4295-201ENST00000585286 85 ntBASIC0.35□□□□□ -2.35
LCE3DQ9BYE3 MIR6509-201ENST00000614603 85 ntBASIC0.35□□□□□ -2.35
LCE3DQ9BYE3 MIR664A-201ENST00000626086 82 ntBASIC0.35□□□□□ -2.35
LCE3DQ9BYE3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
LCE3DQ9BYE3 RNU6-1216P-201ENST00000362590 107 ntBASIC0.34□□□□□ -2.36
LCE3DQ9BYE3 SNORD45.1-201ENST00000363181 77 ntBASIC0.34□□□□□ -2.36
LCE3DQ9BYE3 SNORD113.1-201ENST00000363280 73 ntBASIC0.34□□□□□ -2.36
LCE3DQ9BYE3 SNORD118-201ENST00000363593 134 ntBASIC0.34□□□□□ -2.36
LCE3DQ9BYE3 Y_RNA.386-201ENST00000383913 105 ntBASIC0.34□□□□□ -2.36
LCE3DQ9BYE3 Y_RNA.407-201ENST00000383986 113 ntBASIC0.34□□□□□ -2.36
LCE3DQ9BYE3 RNU6-260P-201ENST00000384092 107 ntBASIC0.34□□□□□ -2.36
LCE3DQ9BYE3 Y_RNA.443-201ENST00000384135 111 ntBASIC0.34□□□□□ -2.36
LCE3DQ9BYE3 Y_RNA.510-201ENST00000384511 114 ntBASIC0.34□□□□□ -2.36
LCE3DQ9BYE3 MIR504-201ENST00000385065 83 ntBASIC0.34□□□□□ -2.36
LCE3DQ9BYE3 SNORA17.3-201ENST00000391159 129 ntBASIC0.34□□□□□ -2.36
LCE3DQ9BYE3 MIR1323-201ENST00000408090 73 ntBASIC0.34□□□□□ -2.36
LCE3DQ9BYE3 AC006210.1-201ENST00000424882 111 ntBASIC0.34□□□□□ -2.36
LCE3DQ9BYE3 OR2A41P-201ENST00000473586 105 ntBASIC0.34□□□□□ -2.36
LCE3DQ9BYE3 NAMPTP3-201ENST00000569273 224 ntBASIC0.34□□□□□ -2.36
LCE3DQ9BYE3 MIR4648-201ENST00000580107 72 ntBASIC0.34□□□□□ -2.36
LCE3DQ9BYE3 MIR4435-1-201ENST00000582552 80 ntBASIC0.34□□□□□ -2.36
LCE3DQ9BYE3 U7.6-201ENST00000610841 64 ntBASIC0.34□□□□□ -2.36
LCE3DQ9BYE3 MIR6739-201ENST00000622461 75 ntBASIC0.34□□□□□ -2.36
LCE3DQ9BYE3 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
LCE3DQ9BYE3 RNU6-669P-201ENST00000365575 107 ntBASIC0.33□□□□□ -2.36
LCE3DQ9BYE3 RNU6-895P-201ENST00000384125 103 ntBASIC0.33□□□□□ -2.36
LCE3DQ9BYE3 RNU6-800P-201ENST00000384473 103 ntBASIC0.33□□□□□ -2.36
LCE3DQ9BYE3 SNORD116-24-201ENST00000384549 92 ntBASIC0.33□□□□□ -2.36
LCE3DQ9BYE3 SNORD30.1-201ENST00000391309 70 ntBASIC0.33□□□□□ -2.36
LCE3DQ9BYE3 SNORD110-201ENST00000408189 75 ntBASIC0.33□□□□□ -2.36
LCE3DQ9BYE3 SNORA3.2-201ENST00000408221 125 ntBASIC0.33□□□□□ -2.36
LCE3DQ9BYE3 MIR1285-1-201ENST00000408593 84 ntBASIC0.33□□□□□ -2.36
LCE3DQ9BYE3 SNORA40.8-201ENST00000411034 126 ntBASIC0.33□□□□□ -2.36
LCE3DQ9BYE3 RNA5SP222-201ENST00000411039 105 ntBASIC0.33□□□□□ -2.36
LCE3DQ9BYE3 MTND4LP1-201ENST00000446263 157 ntBASIC0.33□□□□□ -2.36
LCE3DQ9BYE3 SNORD2-201ENST00000459163 69 ntBASIC0.33□□□□□ -2.36
LCE3DQ9BYE3 SCARNA17.3-201ENST00000516381 125 ntBASIC0.33□□□□□ -2.36
LCE3DQ9BYE3 AC018659.1-201ENST00000551083 169 ntBASIC0.33□□□□□ -2.36
LCE3DQ9BYE3 AC068338.1-201ENST00000565567 176 ntBASIC0.33□□□□□ -2.36
LCE3DQ9BYE3 RNU1-29P-201ENST00000606574 126 ntBASIC0.33□□□□□ -2.36
LCE3DQ9BYE3 AC092634.7-201ENST00000621022 103 ntBASIC0.33□□□□□ -2.36
LCE3DQ9BYE3 AC103706.3-201ENST00000636297 85 ntBASIC0.33□□□□□ -2.36
LCE3DQ9BYE3 RNA5SP517-201ENST00000364724 117 ntBASIC0.32□□□□□ -2.36
LCE3DQ9BYE3 Y_RNA.333-201ENST00000365274 102 ntBASIC0.32□□□□□ -2.36
LCE3DQ9BYE3 SNORD45A-201ENST00000384512 84 ntBASIC0.32□□□□□ -2.36
LCE3DQ9BYE3 MIR1265-201ENST00000408444 86 ntBASIC0.32□□□□□ -2.36
LCE3DQ9BYE3 SNORD71-201ENST00000411292 86 ntBASIC0.32□□□□□ -2.36
LCE3DQ9BYE3 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC0.32□□□□□ -2.36
LCE3DQ9BYE3 SNORA40.17-201ENST00000517256 115 ntBASIC0.32□□□□□ -2.36
LCE3DQ9BYE3 AC015712.3-201ENST00000559380 164 ntBASIC0.32□□□□□ -2.36
LCE3DQ9BYE3 MIR4653-201ENST00000585107 83 ntBASIC0.32□□□□□ -2.36
LCE3DQ9BYE3 AC005520.4-201ENST00000604337 90 ntBASIC0.32□□□□□ -2.36
LCE3DQ9BYE3 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.32□□□□□ -2.36
LCE3DQ9BYE3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.31□□□□□ -2.36
LCE3DQ9BYE3 MIR449A-201ENST00000362113 91 ntBASIC0.31□□□□□ -2.36
LCE3DQ9BYE3 MIR208A-201ENST00000362287 71 ntBASIC0.31□□□□□ -2.36
LCE3DQ9BYE3 SNORD114-1-201ENST00000362705 72 ntBASIC0.31□□□□□ -2.36
LCE3DQ9BYE3 Y_RNA.125-201ENST00000363371 111 ntBASIC0.31□□□□□ -2.36
LCE3DQ9BYE3 RNA5SP215-201ENST00000363440 122 ntBASIC0.31□□□□□ -2.36
LCE3DQ9BYE3 SNORA63.6-201ENST00000364921 119 ntBASIC0.31□□□□□ -2.36
LCE3DQ9BYE3 Y_RNA.375-201ENST00000365625 101 ntBASIC0.31□□□□□ -2.36
LCE3DQ9BYE3 SNORA15B-2-201ENST00000384058 135 ntBASIC0.31□□□□□ -2.36
LCE3DQ9BYE3 SNORA15B-1-201ENST00000384334 135 ntBASIC0.31□□□□□ -2.36
LCE3DQ9BYE3 MIR521-2-201ENST00000384818 87 ntBASIC0.31□□□□□ -2.36
LCE3DQ9BYE3 MIR518A1-201ENST00000385068 85 ntBASIC0.31□□□□□ -2.36
LCE3DQ9BYE3 MIR483-201ENST00000385070 76 ntBASIC0.31□□□□□ -2.36
LCE3DQ9BYE3 SNORA67.5-201ENST00000391036 107 ntBASIC0.31□□□□□ -2.36
LCE3DQ9BYE3 AC244090.1-201ENST00000441884 93 ntBASIC0.31□□□□□ -2.36
LCE3DQ9BYE3 Y_RNA.633-201ENST00000459107 95 ntBASIC0.31□□□□□ -2.36
LCE3DQ9BYE3 MIR4511-201ENST00000582784 87 ntBASIC0.31□□□□□ -2.36
LCE3DQ9BYE3 AC211469.2-201ENST00000605461 205 ntBASIC0.31□□□□□ -2.36
LCE3DQ9BYE3 RNU6-645P-201ENST00000364649 106 ntBASIC0.3□□□□□ -2.36
LCE3DQ9BYE3 RNU6-1187P-201ENST00000364771 110 ntBASIC0.3□□□□□ -2.36
LCE3DQ9BYE3 RNU6-1162P-201ENST00000384443 104 ntBASIC0.3□□□□□ -2.36
LCE3DQ9BYE3 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
LCE3DQ9BYE3 SNORA40.6-201ENST00000391153 128 ntBASIC0.3□□□□□ -2.36
LCE3DQ9BYE3 HMGN2P22-201ENST00000427588 175 ntBASIC0.3□□□□□ -2.36
LCE3DQ9BYE3 AC098934.3-201ENST00000430450 190 ntBASIC0.3□□□□□ -2.36
LCE3DQ9BYE3 AC125388.1-201ENST00000459631 156 ntBASIC0.3□□□□□ -2.36
LCE3DQ9BYE3 RPL39P28-201ENST00000465655 155 ntBASIC0.3□□□□□ -2.36
LCE3DQ9BYE3 AC108210.2-201ENST00000503681 201 ntBASIC0.3□□□□□ -2.36
LCE3DQ9BYE3 RNU6-295P-201ENST00000516901 104 ntBASIC0.3□□□□□ -2.36
LCE3DQ9BYE3 MIR6845-201ENST00000613182 61 ntBASIC0.3□□□□□ -2.36
LCE3DQ9BYE3 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.3□□□□□ -2.36
LCE3DQ9BYE3 Y_RNA.205-201ENST00000364128 113 ntBASIC0.29□□□□□ -2.36
LCE3DQ9BYE3 RNU6-668P-201ENST00000364180 107 ntBASIC0.29□□□□□ -2.36
LCE3DQ9BYE3 RNA5SP190-201ENST00000365222 118 ntBASIC0.29□□□□□ -2.36
LCE3DQ9BYE3 SNORA2A-201ENST00000383885 135 ntBASIC0.29□□□□□ -2.36
LCE3DQ9BYE3 SNORA36.2-201ENST00000384004 127 ntBASIC0.29□□□□□ -2.36
LCE3DQ9BYE3 RNU6-630P-201ENST00000391258 106 ntBASIC0.29□□□□□ -2.36
LCE3DQ9BYE3 MIR548E-201ENST00000408287 88 ntBASIC0.29□□□□□ -2.36
LCE3DQ9BYE3 ACA64.5-201ENST00000516207 127 ntBASIC0.29□□□□□ -2.36
LCE3DQ9BYE3 RNU6-542P-201ENST00000516405 103 ntBASIC0.29□□□□□ -2.36
LCE3DQ9BYE3 RNU5B-6P-201ENST00000516765 68 ntBASIC0.29□□□□□ -2.36
LCE3DQ9BYE3 AC103810.9-201ENST00000606688 112 ntBASIC0.29□□□□□ -2.36
LCE3DQ9BYE3 SNORA70.25-201ENST00000612741 95 ntBASIC0.29□□□□□ -2.36
LCE3DQ9BYE3 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.29□□□□□ -2.36
LCE3DQ9BYE3 uc_338.10-201ENST00000621872 182 ntBASIC0.29□□□□□ -2.36
LCE3DQ9BYE3 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.28□□□□□ -2.36
LCE3DQ9BYE3 MIR20A-201ENST00000362279 71 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 242 ms