Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 RNU6-303P-201ENST00000517091 106 ntBASIC1.04□□□□□ -2.24
CALR3Q96L12 AL078603.1-201ENST00000603824 313 ntBASIC1.04□□□□□ -2.24
CALR3Q96L12 SNORA25.18-201ENST00000607153 114 ntBASIC1.04□□□□□ -2.24
CALR3Q96L12 SNORD118-201ENST00000363593 134 ntBASIC1.03□□□□□ -2.24
CALR3Q96L12 RNU6-824P-201ENST00000363724 104 ntBASIC1.03□□□□□ -2.24
CALR3Q96L12 RNU6-340P-201ENST00000364005 107 ntBASIC1.03□□□□□ -2.24
CALR3Q96L12 RNA5SP99-201ENST00000364020 114 ntBASIC1.03□□□□□ -2.24
CALR3Q96L12 RNU6V-201ENST00000384105 107 ntBASIC1.03□□□□□ -2.24
CALR3Q96L12 RNU6-807P-201ENST00000516805 107 ntBASIC1.03□□□□□ -2.24
CALR3Q96L12 MIR4653-201ENST00000585107 83 ntBASIC1.03□□□□□ -2.24
CALR3Q96L12 U6.81-201ENST00000612550 106 ntBASIC1.03□□□□□ -2.24
CALR3Q96L12 MIR1297-201ENST00000637311 77 ntBASIC1.03□□□□□ -2.24
CALR3Q96L12 AC108667.1-201ENST00000428618 249 ntBASIC1.02□□□□□ -2.25
CALR3Q96L12 NAMPTP3-201ENST00000569273 224 ntBASIC1.02□□□□□ -2.25
CALR3Q96L12 AC069503.3-201ENST00000618674 145 ntBASIC1.02□□□□□ -2.25
CALR3Q96L12 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.02□□□□□ -2.25
CALR3Q96L12 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.01□□□□□ -2.25
CALR3Q96L12 MIR378A-201ENST00000362177 66 ntBASIC1□□□□□ -2.25
CALR3Q96L12 Y_RNA.244-201ENST00000364484 109 ntBASIC1□□□□□ -2.25
CALR3Q96L12 MIR518A1-201ENST00000385068 85 ntBASIC1□□□□□ -2.25
CALR3Q96L12 MIR146A-201ENST00000385201 99 ntBASIC1□□□□□ -2.25
CALR3Q96L12 AC006210.1-201ENST00000424882 111 ntBASIC1□□□□□ -2.25
CALR3Q96L12 AC069271.1-201ENST00000445577 156 ntBASIC0.99□□□□□ -2.25
CALR3Q96L12 RNA5SP458-201ENST00000516188 119 ntBASIC0.99□□□□□ -2.25
CALR3Q96L12 RNU6-495P-201ENST00000362995 107 ntBASIC0.98□□□□□ -2.25
CALR3Q96L12 Y_RNA.258-201ENST00000364613 105 ntBASIC0.98□□□□□ -2.25
CALR3Q96L12 RNU6-54P-201ENST00000365563 107 ntBASIC0.98□□□□□ -2.25
CALR3Q96L12 SNORD75.2-201ENST00000408784 58 ntBASIC0.98□□□□□ -2.25
CALR3Q96L12 RNU7-24P-201ENST00000458867 62 ntBASIC0.98□□□□□ -2.25
CALR3Q96L12 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.98□□□□□ -2.25
CALR3Q96L12 MIR4769-201ENST00000584126 77 ntBASIC0.98□□□□□ -2.25
CALR3Q96L12 MIR4773-1-201ENST00000637203 78 ntBASIC0.98□□□□□ -2.25
CALR3Q96L12 RNU6-382P-201ENST00000365181 106 ntBASIC0.97□□□□□ -2.25
CALR3Q96L12 SNORD110-201ENST00000408189 75 ntBASIC0.97□□□□□ -2.25
CALR3Q96L12 AC074348.1-201ENST00000426503 132 ntBASIC0.97□□□□□ -2.25
CALR3Q96L12 Y_RNA.532-201ENST00000384590 113 ntBASIC0.96□□□□□ -2.26
CALR3Q96L12 MIR532-201ENST00000385025 91 ntBASIC0.96□□□□□ -2.26
CALR3Q96L12 RNU6-274P-201ENST00000459566 107 ntBASIC0.96□□□□□ -2.26
CALR3Q96L12 MIR4752-201ENST00000579672 72 ntBASIC0.96□□□□□ -2.26
CALR3Q96L12 MIR6857-201ENST00000613267 93 ntBASIC0.96□□□□□ -2.26
CALR3Q96L12 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.95□□□□□ -2.26
CALR3Q96L12 RNU5B-6P-201ENST00000516765 68 ntBASIC0.95□□□□□ -2.26
CALR3Q96L12 MIR4484-201ENST00000582855 83 ntBASIC0.95□□□□□ -2.26
CALR3Q96L12 AC098934.3-201ENST00000430450 190 ntBASIC0.94□□□□□ -2.26
CALR3Q96L12 AC018659.1-201ENST00000551083 169 ntBASIC0.94□□□□□ -2.26
CALR3Q96L12 MIR5706-201ENST00000579841 80 ntBASIC0.94□□□□□ -2.26
CALR3Q96L12 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.94□□□□□ -2.26
CALR3Q96L12 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.94□□□□□ -2.26
CALR3Q96L12 U7.4-201ENST00000614961 63 ntBASIC0.94□□□□□ -2.26
CALR3Q96L12 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.93□□□□□ -2.26
CALR3Q96L12 RNU6-351P-201ENST00000516097 100 ntBASIC0.93□□□□□ -2.26
CALR3Q96L12 AC145423.2-201ENST00000610631 239 ntBASIC0.93□□□□□ -2.26
CALR3Q96L12 SNORA70.25-201ENST00000612741 95 ntBASIC0.93□□□□□ -2.26
CALR3Q96L12 Y_RNA.36-201ENST00000362602 112 ntBASIC0.92□□□□□ -2.26
CALR3Q96L12 SNORD114-2-201ENST00000363953 78 ntBASIC0.92□□□□□ -2.26
CALR3Q96L12 RNU6-945P-201ENST00000383947 107 ntBASIC0.92□□□□□ -2.26
CALR3Q96L12 RNU6-237P-201ENST00000515985 71 ntBASIC0.92□□□□□ -2.26
CALR3Q96L12 RNU4-54P-201ENST00000516428 129 ntBASIC0.92□□□□□ -2.26
CALR3Q96L12 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
CALR3Q96L12 MIR4662A-201ENST00000637499 67 ntBASIC0.92□□□□□ -2.26
CALR3Q96L12 RNU6-154P-201ENST00000384306 106 ntBASIC0.91□□□□□ -2.26
CALR3Q96L12 RNU6-752P-201ENST00000516376 102 ntBASIC0.91□□□□□ -2.26
CALR3Q96L12 RNU1-29P-201ENST00000606574 126 ntBASIC0.91□□□□□ -2.26
CALR3Q96L12 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
CALR3Q96L12 SCARNA18B-201ENST00000458806 135 ntBASIC0.9□□□□□ -2.27
CALR3Q96L12 snoU13.31-201ENST00000607291 104 ntBASIC0.9□□□□□ -2.27
CALR3Q96L12 SNORD42B-201ENST00000458893 67 ntBASIC0.89□□□□□ -2.27
CALR3Q96L12 SNORD114-4-201ENST00000363962 75 ntBASIC0.88□□□□□ -2.27
CALR3Q96L12 SNORA2A-201ENST00000383885 135 ntBASIC0.88□□□□□ -2.27
CALR3Q96L12 AL691482.2-201ENST00000457453 84 ntBASIC0.88□□□□□ -2.27
CALR3Q96L12 RNU6-848P-201ENST00000515948 107 ntBASIC0.88□□□□□ -2.27
CALR3Q96L12 RNU6-617P-201ENST00000516147 107 ntBASIC0.88□□□□□ -2.27
CALR3Q96L12 RNU6-473P-201ENST00000516164 107 ntBASIC0.88□□□□□ -2.27
CALR3Q96L12 RNU6-1049P-201ENST00000516414 107 ntBASIC0.88□□□□□ -2.27
CALR3Q96L12 Y_RNA.327-201ENST00000365201 102 ntBASIC0.87□□□□□ -2.27
CALR3Q96L12 Y_RNA.407-201ENST00000383986 113 ntBASIC0.87□□□□□ -2.27
CALR3Q96L12 Y_RNA.423-201ENST00000384057 113 ntBASIC0.87□□□□□ -2.27
CALR3Q96L12 RNU6-863P-201ENST00000515989 104 ntBASIC0.87□□□□□ -2.27
CALR3Q96L12 RNU6-229P-201ENST00000516614 102 ntBASIC0.87□□□□□ -2.27
CALR3Q96L12 U7.6-201ENST00000610841 64 ntBASIC0.87□□□□□ -2.27
CALR3Q96L12 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
CALR3Q96L12 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.86□□□□□ -2.27
CALR3Q96L12 RNU6-392P-201ENST00000364926 101 ntBASIC0.85□□□□□ -2.27
CALR3Q96L12 SNORA8.1-201ENST00000384250 140 ntBASIC0.85□□□□□ -2.27
CALR3Q96L12 RNA5SP121-201ENST00000516537 101 ntBASIC0.85□□□□□ -2.27
CALR3Q96L12 MIR3675-201ENST00000583661 73 ntBASIC0.85□□□□□ -2.27
CALR3Q96L12 MIR4473-201ENST00000583731 91 ntBASIC0.85□□□□□ -2.27
CALR3Q96L12 RNU6-330P-201ENST00000363015 107 ntBASIC0.84□□□□□ -2.27
CALR3Q96L12 RNU6-776P-201ENST00000364403 104 ntBASIC0.84□□□□□ -2.27
CALR3Q96L12 RNU6-1022P-201ENST00000365049 104 ntBASIC0.84□□□□□ -2.27
CALR3Q96L12 RNU6-1039P-201ENST00000383931 107 ntBASIC0.84□□□□□ -2.27
CALR3Q96L12 Y_RNA.681-201ENST00000516445 113 ntBASIC0.84□□□□□ -2.27
CALR3Q96L12 MIR4498-201ENST00000577599 66 ntBASIC0.84□□□□□ -2.27
CALR3Q96L12 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.84□□□□□ -2.27
CALR3Q96L12 Y_RNA.788-201ENST00000622394 112 ntBASIC0.84□□□□□ -2.27
CALR3Q96L12 MIR6755-201ENST00000619993 66 ntBASIC0.83□□□□□ -2.28
CALR3Q96L12 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.83□□□□□ -2.28
CALR3Q96L12 Y_RNA.338-201ENST00000365320 114 ntBASIC0.82□□□□□ -2.28
CALR3Q96L12 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.82□□□□□ -2.28
CALR3Q96L12 HMGN2P22-201ENST00000427588 175 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 206.5 ms