Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 RNA5SP47-201ENST00000517230 109 ntBASIC1.14□□□□□ -2.23
RNF111Q6ZNA4 AL078603.1-201ENST00000603824 313 ntBASIC1.14□□□□□ -2.23
RNF111Q6ZNA4 MIR618-201ENST00000385287 98 ntBASIC1.13□□□□□ -2.23
RNF111Q6ZNA4 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.13□□□□□ -2.23
RNF111Q6ZNA4 RNU6-1015P-201ENST00000517121 99 ntBASIC1.13□□□□□ -2.23
RNF111Q6ZNA4 RNU6-382P-201ENST00000365181 106 ntBASIC1.12□□□□□ -2.23
RNF111Q6ZNA4 Y_RNA.355-201ENST00000365462 98 ntBASIC1.12□□□□□ -2.23
RNF111Q6ZNA4 SNORD41.1-201ENST00000391000 69 ntBASIC1.12□□□□□ -2.23
RNF111Q6ZNA4 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
RNF111Q6ZNA4 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
RNF111Q6ZNA4 AC244098.3-201ENST00000424803 96 ntBASIC1.11□□□□□ -2.23
RNF111Q6ZNA4 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
RNF111Q6ZNA4 Y_RNA.224-201ENST00000364308 111 ntBASIC1.1□□□□□ -2.23
RNF111Q6ZNA4 RNU6-726P-201ENST00000364680 107 ntBASIC1.1□□□□□ -2.23
RNF111Q6ZNA4 RNU6-392P-201ENST00000364926 101 ntBASIC1.1□□□□□ -2.23
RNF111Q6ZNA4 RNU6-939P-201ENST00000384634 107 ntBASIC1.1□□□□□ -2.23
RNF111Q6ZNA4 MIR216B-201ENST00000390186 82 ntBASIC1.1□□□□□ -2.23
RNF111Q6ZNA4 RNU7-74P-201ENST00000459104 62 ntBASIC1.1□□□□□ -2.23
RNF111Q6ZNA4 RNU6-274P-201ENST00000459566 107 ntBASIC1.1□□□□□ -2.23
RNF111Q6ZNA4 AC139453.2-201ENST00000487255 133 ntBASIC1.1□□□□□ -2.23
RNF111Q6ZNA4 RNU6-687P-201ENST00000516443 89 ntBASIC1.1□□□□□ -2.23
RNF111Q6ZNA4 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.1□□□□□ -2.23
RNF111Q6ZNA4 MIR18A-201ENST00000362310 71 ntBASIC1.09□□□□□ -2.23
RNF111Q6ZNA4 RNU6-54P-201ENST00000365563 107 ntBASIC1.09□□□□□ -2.23
RNF111Q6ZNA4 RNU6-587P-201ENST00000391282 106 ntBASIC1.09□□□□□ -2.23
RNF111Q6ZNA4 SCARNA16.5-201ENST00000517114 183 ntBASIC1.09□□□□□ -2.23
RNF111Q6ZNA4 MIR3675-201ENST00000583661 73 ntBASIC1.09□□□□□ -2.23
RNF111Q6ZNA4 MIR548O2-201ENST00000616090 70 ntBASIC1.09□□□□□ -2.23
RNF111Q6ZNA4 RNU6-1241P-201ENST00000384536 107 ntBASIC1.08□□□□□ -2.24
RNF111Q6ZNA4 NAMPTP3-201ENST00000569273 224 ntBASIC1.08□□□□□ -2.24
RNF111Q6ZNA4 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.08□□□□□ -2.24
RNF111Q6ZNA4 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.08□□□□□ -2.24
RNF111Q6ZNA4 RNU6V-201ENST00000384105 107 ntBASIC1.07□□□□□ -2.24
RNF111Q6ZNA4 MIR154-201ENST00000385243 84 ntBASIC1.07□□□□□ -2.24
RNF111Q6ZNA4 RNA5SP222-201ENST00000411039 105 ntBASIC1.07□□□□□ -2.24
RNF111Q6ZNA4 RNU6-871P-201ENST00000516122 100 ntBASIC1.07□□□□□ -2.24
RNF111Q6ZNA4 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.07□□□□□ -2.24
RNF111Q6ZNA4 RNU6-269P-201ENST00000391077 97 ntBASIC1.06□□□□□ -2.24
RNF111Q6ZNA4 RNA5SP227-201ENST00000516184 113 ntBASIC1.06□□□□□ -2.24
RNF111Q6ZNA4 SNORD75.2-201ENST00000408784 58 ntBASIC1.05□□□□□ -2.24
RNF111Q6ZNA4 AC093423.1-201ENST00000440817 142 ntBASIC1.05□□□□□ -2.24
RNF111Q6ZNA4 AL691482.2-201ENST00000457453 84 ntBASIC1.05□□□□□ -2.24
RNF111Q6ZNA4 snoU13.18-201ENST00000459483 104 ntBASIC1.05□□□□□ -2.24
RNF111Q6ZNA4 AC114801.3-201ENST00000510231 177 ntBASIC1.05□□□□□ -2.24
RNF111Q6ZNA4 MIR4460-201ENST00000577862 86 ntBASIC1.05□□□□□ -2.24
RNF111Q6ZNA4 RNU6-495P-201ENST00000362995 107 ntBASIC1.04□□□□□ -2.24
RNF111Q6ZNA4 SNORA36.1-201ENST00000363424 132 ntBASIC1.04□□□□□ -2.24
RNF111Q6ZNA4 RNU6-634P-201ENST00000459134 106 ntBASIC1.04□□□□□ -2.24
RNF111Q6ZNA4 MIR4295-201ENST00000585286 85 ntBASIC1.04□□□□□ -2.24
RNF111Q6ZNA4 AL353765.1-201ENST00000605514 183 ntBASIC1.04□□□□□ -2.24
RNF111Q6ZNA4 AC103810.9-201ENST00000606688 112 ntBASIC1.04□□□□□ -2.24
RNF111Q6ZNA4 MIR6504-201ENST00000613520 61 ntBASIC1.04□□□□□ -2.24
RNF111Q6ZNA4 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
RNF111Q6ZNA4 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.04□□□□□ -2.24
RNF111Q6ZNA4 SNORD45.1-201ENST00000363181 77 ntBASIC1.03□□□□□ -2.24
RNF111Q6ZNA4 RNU1-141P-201ENST00000364623 158 ntBASIC1.03□□□□□ -2.24
RNF111Q6ZNA4 MIR1276-201ENST00000408707 83 ntBASIC1.03□□□□□ -2.24
RNF111Q6ZNA4 AC087343.1-201ENST00000477341 475 ntBASIC1.03□□□□□ -2.24
RNF111Q6ZNA4 RNA5SP94-201ENST00000516917 108 ntBASIC1.03□□□□□ -2.24
RNF111Q6ZNA4 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.03□□□□□ -2.24
RNF111Q6ZNA4 MIR6828-201ENST00000636181 60 ntBASIC1.03□□□□□ -2.24
RNF111Q6ZNA4 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.02□□□□□ -2.25
RNF111Q6ZNA4 SNORD115-31-201ENST00000365318 82 ntBASIC1.02□□□□□ -2.25
RNF111Q6ZNA4 MIR489-201ENST00000384923 84 ntBASIC1.02□□□□□ -2.25
RNF111Q6ZNA4 RNA5SP484-201ENST00000458857 111 ntBASIC1.02□□□□□ -2.25
RNF111Q6ZNA4 RNU6-752P-201ENST00000516376 102 ntBASIC1.02□□□□□ -2.25
RNF111Q6ZNA4 RNA5SP268-201ENST00000516828 124 ntBASIC1.02□□□□□ -2.25
RNF111Q6ZNA4 RNU4-45P-201ENST00000365469 141 ntBASIC1.01□□□□□ -2.25
RNF111Q6ZNA4 RNY1P8-201ENST00000383970 114 ntBASIC1.01□□□□□ -2.25
RNF111Q6ZNA4 MIR203A-201ENST00000384836 110 ntBASIC1.01□□□□□ -2.25
RNF111Q6ZNA4 MT-TY-201ENST00000387409 66 ntBASIC1.01□□□□□ -2.25
RNF111Q6ZNA4 RNU7-24P-201ENST00000458867 62 ntBASIC1.01□□□□□ -2.25
RNF111Q6ZNA4 SNORD42B-201ENST00000458893 67 ntBASIC1.01□□□□□ -2.25
RNF111Q6ZNA4 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.01□□□□□ -2.25
RNF111Q6ZNA4 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1□□□□□ -2.25
RNF111Q6ZNA4 SNORA36.2-201ENST00000384004 127 ntBASIC1□□□□□ -2.25
RNF111Q6ZNA4 SNORA8.2-201ENST00000384372 139 ntBASIC1□□□□□ -2.25
RNF111Q6ZNA4 RNU6-604P-201ENST00000390917 100 ntBASIC1□□□□□ -2.25
RNF111Q6ZNA4 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1□□□□□ -2.25
RNF111Q6ZNA4 RNU5B-6P-201ENST00000516765 68 ntBASIC1□□□□□ -2.25
RNF111Q6ZNA4 MIR4452-201ENST00000583004 71 ntBASIC1□□□□□ -2.25
RNF111Q6ZNA4 SNORD114-21-201ENST00000606412 72 ntBASIC1□□□□□ -2.25
RNF111Q6ZNA4 MIR6509-201ENST00000614603 85 ntBASIC1□□□□□ -2.25
RNF111Q6ZNA4 AL162376.1-201ENST00000624117 175 ntBASIC1□□□□□ -2.25
RNF111Q6ZNA4 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
RNF111Q6ZNA4 RNU6-1039P-201ENST00000383931 107 ntBASIC0.99□□□□□ -2.25
RNF111Q6ZNA4 RNU6-42P-201ENST00000384165 107 ntBASIC0.99□□□□□ -2.25
RNF111Q6ZNA4 SNORD45A-201ENST00000384512 84 ntBASIC0.99□□□□□ -2.25
RNF111Q6ZNA4 MIR4661-201ENST00000582720 75 ntBASIC0.99□□□□□ -2.25
RNF111Q6ZNA4 MIR6734-201ENST00000621166 68 ntBASIC0.99□□□□□ -2.25
RNF111Q6ZNA4 RNU6-540P-201ENST00000384622 101 ntBASIC0.98□□□□□ -2.25
RNF111Q6ZNA4 SNORD30.1-201ENST00000391309 70 ntBASIC0.98□□□□□ -2.25
RNF111Q6ZNA4 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.98□□□□□ -2.25
RNF111Q6ZNA4 RNA5SP220-201ENST00000516298 104 ntBASIC0.98□□□□□ -2.25
RNF111Q6ZNA4 RNA5SP102-201ENST00000516865 106 ntBASIC0.98□□□□□ -2.25
RNF111Q6ZNA4 MIR7107-201ENST00000611489 80 ntBASIC0.98□□□□□ -2.25
RNF111Q6ZNA4 RNU6-649P-201ENST00000384463 107 ntBASIC0.97□□□□□ -2.25
RNF111Q6ZNA4 OR2A41P-201ENST00000473586 105 ntBASIC0.97□□□□□ -2.25
RNF111Q6ZNA4 SNORD115-22-201ENST00000364456 82 ntBASIC0.96□□□□□ -2.26
RNF111Q6ZNA4 RNU6-895P-201ENST00000384125 103 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 295.9 ms