Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 AL078603.1-201ENST00000603824 313 ntBASIC1.37□□□□□ -2.19
TTC39BQ5VTQ0 RNA5SP255-201ENST00000516370 107 ntBASIC1.36□□□□□ -2.19
TTC39BQ5VTQ0 MIR3660-201ENST00000584845 100 ntBASIC1.36□□□□□ -2.19
TTC39BQ5VTQ0 AL353770.2-201ENST00000620024 78 ntBASIC1.36□□□□□ -2.19
TTC39BQ5VTQ0 MIR216B-201ENST00000390186 82 ntBASIC1.35□□□□□ -2.19
TTC39BQ5VTQ0 RNU6-788P-201ENST00000390967 104 ntBASIC1.35□□□□□ -2.19
TTC39BQ5VTQ0 SNORA40.6-201ENST00000391153 128 ntBASIC1.35□□□□□ -2.19
TTC39BQ5VTQ0 AC068338.1-201ENST00000565567 176 ntBASIC1.35□□□□□ -2.19
TTC39BQ5VTQ0 MIR548O2-201ENST00000616090 70 ntBASIC1.35□□□□□ -2.19
TTC39BQ5VTQ0 Y_RNA.118-201ENST00000363300 101 ntBASIC1.34□□□□□ -2.19
TTC39BQ5VTQ0 RNU6-726P-201ENST00000364680 107 ntBASIC1.34□□□□□ -2.19
TTC39BQ5VTQ0 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
TTC39BQ5VTQ0 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.33□□□□□ -2.2
TTC39BQ5VTQ0 SNORD115-31-201ENST00000365318 82 ntBASIC1.33□□□□□ -2.2
TTC39BQ5VTQ0 MIR154-201ENST00000385243 84 ntBASIC1.33□□□□□ -2.2
TTC39BQ5VTQ0 MIR548L-201ENST00000408303 86 ntBASIC1.33□□□□□ -2.2
TTC39BQ5VTQ0 MIR7111-201ENST00000619751 72 ntBASIC1.33□□□□□ -2.2
TTC39BQ5VTQ0 RNU6-495P-201ENST00000362995 107 ntBASIC1.32□□□□□ -2.2
TTC39BQ5VTQ0 RNU6-716P-201ENST00000365621 103 ntBASIC1.32□□□□□ -2.2
TTC39BQ5VTQ0 SNORD99-201ENST00000408612 74 ntBASIC1.32□□□□□ -2.2
TTC39BQ5VTQ0 AC093423.1-201ENST00000440817 142 ntBASIC1.32□□□□□ -2.2
TTC39BQ5VTQ0 RNU6-274P-201ENST00000459566 107 ntBASIC1.32□□□□□ -2.2
TTC39BQ5VTQ0 Y_RNA.224-201ENST00000364308 111 ntBASIC1.31□□□□□ -2.2
TTC39BQ5VTQ0 RNU6-392P-201ENST00000364926 101 ntBASIC1.31□□□□□ -2.2
TTC39BQ5VTQ0 RNU6-540P-201ENST00000384622 101 ntBASIC1.31□□□□□ -2.2
TTC39BQ5VTQ0 RNU7-74P-201ENST00000459104 62 ntBASIC1.31□□□□□ -2.2
TTC39BQ5VTQ0 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.31□□□□□ -2.2
TTC39BQ5VTQ0 NAMPTP3-201ENST00000569273 224 ntBASIC1.31□□□□□ -2.2
TTC39BQ5VTQ0 AC011195.1-201ENST00000578177 177 ntBASIC1.31□□□□□ -2.2
TTC39BQ5VTQ0 MIR4661-201ENST00000582720 75 ntBASIC1.31□□□□□ -2.2
TTC39BQ5VTQ0 RNU6-54P-201ENST00000365563 107 ntBASIC1.3□□□□□ -2.2
TTC39BQ5VTQ0 SNORD75.2-201ENST00000408784 58 ntBASIC1.3□□□□□ -2.2
TTC39BQ5VTQ0 RNU6-539P-201ENST00000516665 103 ntBASIC1.3□□□□□ -2.2
TTC39BQ5VTQ0 SCARNA16.5-201ENST00000517114 183 ntBASIC1.3□□□□□ -2.2
TTC39BQ5VTQ0 MIR6078-201ENST00000611069 100 ntBASIC1.3□□□□□ -2.2
TTC39BQ5VTQ0 SNORD45.1-201ENST00000363181 77 ntBASIC1.29□□□□□ -2.2
TTC39BQ5VTQ0 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
TTC39BQ5VTQ0 AC244098.3-201ENST00000424803 96 ntBASIC1.29□□□□□ -2.2
TTC39BQ5VTQ0 RNU7-24P-201ENST00000458867 62 ntBASIC1.29□□□□□ -2.2
TTC39BQ5VTQ0 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.29□□□□□ -2.2
TTC39BQ5VTQ0 MIR18A-201ENST00000362310 71 ntBASIC1.28□□□□□ -2.2
TTC39BQ5VTQ0 AL691482.2-201ENST00000457453 84 ntBASIC1.28□□□□□ -2.2
TTC39BQ5VTQ0 RNU6-752P-201ENST00000516376 102 ntBASIC1.28□□□□□ -2.2
TTC39BQ5VTQ0 RNU6V-201ENST00000384105 107 ntBASIC1.27□□□□□ -2.21
TTC39BQ5VTQ0 RNU6-269P-201ENST00000391077 97 ntBASIC1.27□□□□□ -2.21
TTC39BQ5VTQ0 OR2A41P-201ENST00000473586 105 ntBASIC1.27□□□□□ -2.21
TTC39BQ5VTQ0 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.26□□□□□ -2.21
TTC39BQ5VTQ0 RNU6-649P-201ENST00000384463 107 ntBASIC1.26□□□□□ -2.21
TTC39BQ5VTQ0 MIR6828-201ENST00000636181 60 ntBASIC1.26□□□□□ -2.21
TTC39BQ5VTQ0 SNORD115-22-201ENST00000364456 82 ntBASIC1.25□□□□□ -2.21
TTC39BQ5VTQ0 RNU1-141P-201ENST00000364623 158 ntBASIC1.25□□□□□ -2.21
TTC39BQ5VTQ0 RNU6-590P-201ENST00000365039 107 ntBASIC1.25□□□□□ -2.21
TTC39BQ5VTQ0 Y_RNA.355-201ENST00000365462 98 ntBASIC1.25□□□□□ -2.21
TTC39BQ5VTQ0 SNORD45A-201ENST00000384512 84 ntBASIC1.25□□□□□ -2.21
TTC39BQ5VTQ0 MT-TY-201ENST00000387409 66 ntBASIC1.25□□□□□ -2.21
TTC39BQ5VTQ0 SNORD42B-201ENST00000458893 67 ntBASIC1.25□□□□□ -2.21
TTC39BQ5VTQ0 MIR4460-201ENST00000577862 86 ntBASIC1.25□□□□□ -2.21
TTC39BQ5VTQ0 SNORA36.1-201ENST00000363424 132 ntBASIC1.24□□□□□ -2.21
TTC39BQ5VTQ0 RNU6-1039P-201ENST00000383931 107 ntBASIC1.24□□□□□ -2.21
TTC39BQ5VTQ0 SNORD30.1-201ENST00000391309 70 ntBASIC1.24□□□□□ -2.21
TTC39BQ5VTQ0 MIR1276-201ENST00000408707 83 ntBASIC1.24□□□□□ -2.21
TTC39BQ5VTQ0 SNORA8.2-201ENST00000384372 139 ntBASIC1.23□□□□□ -2.21
TTC39BQ5VTQ0 MIR6504-201ENST00000613520 61 ntBASIC1.23□□□□□ -2.21
TTC39BQ5VTQ0 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.22□□□□□ -2.21
TTC39BQ5VTQ0 RNU6-604P-201ENST00000390917 100 ntBASIC1.22□□□□□ -2.21
TTC39BQ5VTQ0 RNA5SP102-201ENST00000516865 106 ntBASIC1.22□□□□□ -2.21
TTC39BQ5VTQ0 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.22□□□□□ -2.21
TTC39BQ5VTQ0 MIR8053-201ENST00000613344 75 ntBASIC1.22□□□□□ -2.21
TTC39BQ5VTQ0 MIR6509-201ENST00000614603 85 ntBASIC1.22□□□□□ -2.21
TTC39BQ5VTQ0 AL162376.1-201ENST00000624117 175 ntBASIC1.22□□□□□ -2.21
TTC39BQ5VTQ0 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
TTC39BQ5VTQ0 MIR203A-201ENST00000384836 110 ntBASIC1.21□□□□□ -2.22
TTC39BQ5VTQ0 RNU6-663P-201ENST00000391105 106 ntBASIC1.21□□□□□ -2.22
TTC39BQ5VTQ0 RNA5SP484-201ENST00000458857 111 ntBASIC1.21□□□□□ -2.22
TTC39BQ5VTQ0 RNA5SP227-201ENST00000516184 113 ntBASIC1.21□□□□□ -2.22
TTC39BQ5VTQ0 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.21□□□□□ -2.22
TTC39BQ5VTQ0 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.21□□□□□ -2.22
TTC39BQ5VTQ0 AL353765.1-201ENST00000605514 183 ntBASIC1.21□□□□□ -2.22
TTC39BQ5VTQ0 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.2□□□□□ -2.22
TTC39BQ5VTQ0 RNA5SP222-201ENST00000411039 105 ntBASIC1.2□□□□□ -2.22
TTC39BQ5VTQ0 RNA5SP94-201ENST00000516917 108 ntBASIC1.2□□□□□ -2.22
TTC39BQ5VTQ0 RNU4-45P-201ENST00000365469 141 ntBASIC1.19□□□□□ -2.22
TTC39BQ5VTQ0 RNU6-895P-201ENST00000384125 103 ntBASIC1.19□□□□□ -2.22
TTC39BQ5VTQ0 MIR1285-1-201ENST00000408593 84 ntBASIC1.19□□□□□ -2.22
TTC39BQ5VTQ0 snoU13.18-201ENST00000459483 104 ntBASIC1.19□□□□□ -2.22
TTC39BQ5VTQ0 RNU5B-6P-201ENST00000516765 68 ntBASIC1.19□□□□□ -2.22
TTC39BQ5VTQ0 RNU6-881P-201ENST00000516813 102 ntBASIC1.19□□□□□ -2.22
TTC39BQ5VTQ0 RNA5SP268-201ENST00000516828 124 ntBASIC1.19□□□□□ -2.22
TTC39BQ5VTQ0 U6.111-201ENST00000636093 83 ntBASIC1.19□□□□□ -2.22
TTC39BQ5VTQ0 SNORD113.1-201ENST00000363280 73 ntBASIC1.18□□□□□ -2.22
TTC39BQ5VTQ0 Y_RNA.386-201ENST00000383913 105 ntBASIC1.18□□□□□ -2.22
TTC39BQ5VTQ0 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
TTC39BQ5VTQ0 MIR4452-201ENST00000583004 71 ntBASIC1.18□□□□□ -2.22
TTC39BQ5VTQ0 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
TTC39BQ5VTQ0 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
TTC39BQ5VTQ0 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.17□□□□□ -2.22
TTC39BQ5VTQ0 AC018659.1-201ENST00000551083 169 ntBASIC1.17□□□□□ -2.22
TTC39BQ5VTQ0 RNU6-260P-201ENST00000384092 107 ntBASIC1.16□□□□□ -2.22
TTC39BQ5VTQ0 RNU6-800P-201ENST00000384473 103 ntBASIC1.16□□□□□ -2.22
TTC39BQ5VTQ0 MIR3657-201ENST00000584818 117 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 279.9 ms