Protein–RNA interactions for Protein: P78333

GPC5, Glypican-5, humanhuman

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC5P78333 RNU6-49P-201ENST00000384256 107 ntBASIC0.47□□□□□ -2.33
GPC5P78333 SNORD116-22-201ENST00000384430 92 ntBASIC0.47□□□□□ -2.33
GPC5P78333 MIR519E-201ENST00000385075 84 ntBASIC0.47□□□□□ -2.33
GPC5P78333 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.47□□□□□ -2.33
GPC5P78333 SNORA68.3-201ENST00000515906 83 ntBASIC0.47□□□□□ -2.33
GPC5P78333 RNU6-863P-201ENST00000515989 104 ntBASIC0.47□□□□□ -2.33
GPC5P78333 RNU6-844P-201ENST00000517175 102 ntBASIC0.47□□□□□ -2.33
GPC5P78333 AC104996.3-201ENST00000590718 94 ntBASIC0.47□□□□□ -2.33
GPC5P78333 Y_RNA.433-201ENST00000384089 102 ntBASIC0.46□□□□□ -2.34
GPC5P78333 MIR4668-201ENST00000582284 70 ntBASIC0.46□□□□□ -2.34
GPC5P78333 SNORD44.1-201ENST00000363202 61 ntBASIC0.45□□□□□ -2.34
GPC5P78333 Y_RNA.491-201ENST00000384417 107 ntBASIC0.45□□□□□ -2.34
GPC5P78333 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
GPC5P78333 RNA5SP170-201ENST00000517150 101 ntBASIC0.45□□□□□ -2.34
GPC5P78333 MIR4752-201ENST00000579672 72 ntBASIC0.45□□□□□ -2.34
GPC5P78333 MIR4514-201ENST00000581410 57 ntBASIC0.45□□□□□ -2.34
GPC5P78333 MIRLET7D-201ENST00000362263 87 ntBASIC0.44□□□□□ -2.34
GPC5P78333 MIR216B-201ENST00000390186 82 ntBASIC0.44□□□□□ -2.34
GPC5P78333 MIR5582-201ENST00000579697 68 ntBASIC0.44□□□□□ -2.34
GPC5P78333 RNU1-141P-201ENST00000364623 158 ntBASIC0.43□□□□□ -2.34
GPC5P78333 Y_RNA.423-201ENST00000384057 113 ntBASIC0.43□□□□□ -2.34
GPC5P78333 MIR451A-201ENST00000385059 72 ntBASIC0.43□□□□□ -2.34
GPC5P78333 MIR1236-201ENST00000408340 102 ntBASIC0.43□□□□□ -2.34
GPC5P78333 RNA5SP484-201ENST00000458857 111 ntBASIC0.43□□□□□ -2.34
GPC5P78333 RNU6-848P-201ENST00000515948 107 ntBASIC0.43□□□□□ -2.34
GPC5P78333 RNU6-617P-201ENST00000516147 107 ntBASIC0.43□□□□□ -2.34
GPC5P78333 RNU6-473P-201ENST00000516164 107 ntBASIC0.43□□□□□ -2.34
GPC5P78333 RNU6-1049P-201ENST00000516414 107 ntBASIC0.43□□□□□ -2.34
GPC5P78333 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.43□□□□□ -2.34
GPC5P78333 RNU6-1298P-201ENST00000362456 101 ntBASIC0.42□□□□□ -2.34
GPC5P78333 RNU6-633P-201ENST00000362612 103 ntBASIC0.42□□□□□ -2.34
GPC5P78333 RNA5SP62-201ENST00000363457 110 ntBASIC0.42□□□□□ -2.34
GPC5P78333 RNU6-1134P-201ENST00000365156 101 ntBASIC0.42□□□□□ -2.34
GPC5P78333 Y_RNA.369-201ENST00000365568 117 ntBASIC0.42□□□□□ -2.34
GPC5P78333 RNA5SP292-201ENST00000390974 118 ntBASIC0.42□□□□□ -2.34
GPC5P78333 RNU6-402P-201ENST00000410678 103 ntBASIC0.42□□□□□ -2.34
GPC5P78333 Y_RNA.620-201ENST00000411009 88 ntBASIC0.42□□□□□ -2.34
GPC5P78333 AC093423.1-201ENST00000440817 142 ntBASIC0.42□□□□□ -2.34
GPC5P78333 SNORA18.5-201ENST00000516616 101 ntBASIC0.42□□□□□ -2.34
GPC5P78333 NAMPTP3-201ENST00000569273 224 ntBASIC0.42□□□□□ -2.34
GPC5P78333 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
GPC5P78333 SNORA2A-201ENST00000383885 135 ntBASIC0.41□□□□□ -2.34
GPC5P78333 AC006210.1-201ENST00000424882 111 ntBASIC0.41□□□□□ -2.34
GPC5P78333 SNORA62.5-201ENST00000516634 120 ntBASIC0.41□□□□□ -2.34
GPC5P78333 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.41□□□□□ -2.34
GPC5P78333 MIR5706-201ENST00000579841 80 ntBASIC0.41□□□□□ -2.34
GPC5P78333 RNU1-29P-201ENST00000606574 126 ntBASIC0.41□□□□□ -2.34
GPC5P78333 MIR6755-201ENST00000619993 66 ntBASIC0.41□□□□□ -2.34
GPC5P78333 AC090625.1-201ENST00000357130 210 ntBASIC0.4□□□□□ -2.35
GPC5P78333 MIR103A1-201ENST00000362165 78 ntBASIC0.4□□□□□ -2.35
GPC5P78333 RNU6-219P-201ENST00000364728 107 ntBASIC0.4□□□□□ -2.35
GPC5P78333 MIR519C-201ENST00000385053 87 ntBASIC0.4□□□□□ -2.35
GPC5P78333 U3.27-201ENST00000391237 200 ntBASIC0.4□□□□□ -2.35
GPC5P78333 SNORD110-201ENST00000408189 75 ntBASIC0.4□□□□□ -2.35
GPC5P78333 MIR4460-201ENST00000577862 86 ntBASIC0.4□□□□□ -2.35
GPC5P78333 SNORA70.25-201ENST00000612741 95 ntBASIC0.4□□□□□ -2.35
GPC5P78333 SNORD115-27-201ENST00000364430 82 ntBASIC0.39□□□□□ -2.35
GPC5P78333 RNU6-294P-201ENST00000364999 102 ntBASIC0.39□□□□□ -2.35
GPC5P78333 SNORA50A-201ENST00000384225 134 ntBASIC0.39□□□□□ -2.35
GPC5P78333 Y_RNA.17-201ENST00000362433 111 ntBASIC0.38□□□□□ -2.35
GPC5P78333 FGF7P7-201ENST00000514120 227 ntBASIC0.38□□□□□ -2.35
GPC5P78333 MIR4796-201ENST00000580742 81 ntBASIC0.38□□□□□ -2.35
GPC5P78333 U7.6-201ENST00000610841 64 ntBASIC0.38□□□□□ -2.35
GPC5P78333 AC069503.3-201ENST00000618674 145 ntBASIC0.38□□□□□ -2.35
GPC5P78333 SNORA63.2-201ENST00000362603 126 ntBASIC0.37□□□□□ -2.35
GPC5P78333 SNORD115-37-201ENST00000363768 82 ntBASIC0.37□□□□□ -2.35
GPC5P78333 RNY4P3-201ENST00000365254 95 ntBASIC0.37□□□□□ -2.35
GPC5P78333 RNU6-675P-201ENST00000384236 104 ntBASIC0.37□□□□□ -2.35
GPC5P78333 MT-TY-201ENST00000387409 66 ntBASIC0.37□□□□□ -2.35
GPC5P78333 RNU6-267P-201ENST00000516714 103 ntBASIC0.37□□□□□ -2.35
GPC5P78333 RNU6-1051P-201ENST00000365471 102 ntBASIC0.36□□□□□ -2.35
GPC5P78333 Y_RNA.558-201ENST00000384685 113 ntBASIC0.36□□□□□ -2.35
GPC5P78333 MIR760-201ENST00000390220 80 ntBASIC0.36□□□□□ -2.35
GPC5P78333 RNA5SP63-201ENST00000391225 112 ntBASIC0.36□□□□□ -2.35
GPC5P78333 RNU7-153P-201ENST00000516455 62 ntBASIC0.36□□□□□ -2.35
GPC5P78333 AC023932.2-201ENST00000603176 175 ntBASIC0.36□□□□□ -2.35
GPC5P78333 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
GPC5P78333 Y_RNA.593-201ENST00000410292 98 ntBASIC0.35□□□□□ -2.35
GPC5P78333 RNU6-1052P-201ENST00000411398 104 ntBASIC0.35□□□□□ -2.35
GPC5P78333 RNA5SP395-201ENST00000516567 118 ntBASIC0.35□□□□□ -2.35
GPC5P78333 RNU6-719P-201ENST00000516671 104 ntBASIC0.35□□□□□ -2.35
GPC5P78333 YWHAEP2-201ENST00000580066 112 ntBASIC0.35□□□□□ -2.35
GPC5P78333 MIR548O2-201ENST00000616090 70 ntBASIC0.35□□□□□ -2.35
GPC5P78333 RNU6-1327P-201ENST00000365302 105 ntBASIC0.34□□□□□ -2.36
GPC5P78333 RNA5SP128-201ENST00000365305 116 ntBASIC0.34□□□□□ -2.36
GPC5P78333 AC073261.1-201ENST00000429409 121 ntBASIC0.34□□□□□ -2.36
GPC5P78333 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.34□□□□□ -2.36
GPC5P78333 MIR3140-201ENST00000583685 90 ntBASIC0.34□□□□□ -2.36
GPC5P78333 IGLL4P-201ENST00000614590 133 ntBASIC0.34□□□□□ -2.36
GPC5P78333 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.34□□□□□ -2.36
GPC5P78333 SNORA9.1-201ENST00000362412 131 ntBASIC0.33□□□□□ -2.36
GPC5P78333 Y_RNA.43-201ENST00000362670 111 ntBASIC0.33□□□□□ -2.36
GPC5P78333 RNU6-1255P-201ENST00000363434 112 ntBASIC0.33□□□□□ -2.36
GPC5P78333 RNU6-497P-201ENST00000365316 104 ntBASIC0.33□□□□□ -2.36
GPC5P78333 AC093729.1-201ENST00000513074 128 ntBASIC0.33□□□□□ -2.36
GPC5P78333 RNU6-1232P-201ENST00000516299 86 ntBASIC0.33□□□□□ -2.36
GPC5P78333 MIR548BB-201ENST00000626714 66 ntBASIC0.33□□□□□ -2.36
GPC5P78333 RNU5F-1-201ENST00000362507 117 ntBASIC0.32□□□□□ -2.36
GPC5P78333 RNY1P1-201ENST00000364372 112 ntBASIC0.32□□□□□ -2.36
GPC5P78333 RNU6-815P-201ENST00000384080 113 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms