Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 RNU6-1126P-201ENST00000384002 107 ntBASIC1.26□□□□□ -2.21
YBX1P67809 MIR758-201ENST00000390227 88 ntBASIC1.26□□□□□ -2.21
YBX1P67809 MIR548AG2-201ENST00000581228 64 ntBASIC1.26□□□□□ -2.21
YBX1P67809 AC067863.3-201ENST00000624172 122 ntBASIC1.26□□□□□ -2.21
YBX1P67809 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.25□□□□□ -2.21
YBX1P67809 RNU1-93P-201ENST00000364704 169 ntBASIC1.25□□□□□ -2.21
YBX1P67809 SNORD115-31-201ENST00000365318 82 ntBASIC1.25□□□□□ -2.21
YBX1P67809 RNU6-540P-201ENST00000384622 101 ntBASIC1.25□□□□□ -2.21
YBX1P67809 MIR618-201ENST00000385287 98 ntBASIC1.25□□□□□ -2.21
YBX1P67809 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
YBX1P67809 RNU6-274P-201ENST00000459566 107 ntBASIC1.25□□□□□ -2.21
YBX1P67809 RNU6-469P-201ENST00000516253 101 ntBASIC1.25□□□□□ -2.21
YBX1P67809 MIR151B-201ENST00000584249 96 ntBASIC1.25□□□□□ -2.21
YBX1P67809 SNORD45.1-201ENST00000363181 77 ntBASIC1.24□□□□□ -2.21
YBX1P67809 RNU6-382P-201ENST00000365181 106 ntBASIC1.24□□□□□ -2.21
YBX1P67809 SNORD105-201ENST00000386910 85 ntBASIC1.24□□□□□ -2.21
YBX1P67809 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
YBX1P67809 FABP5P4-201ENST00000437203 171 ntBASIC1.24□□□□□ -2.21
YBX1P67809 AC125388.1-201ENST00000459631 156 ntBASIC1.24□□□□□ -2.21
YBX1P67809 RNU6-1110P-201ENST00000516462 101 ntBASIC1.24□□□□□ -2.21
YBX1P67809 MIR3660-201ENST00000584845 100 ntBASIC1.24□□□□□ -2.21
YBX1P67809 MIR96-201ENST00000362288 78 ntBASIC1.23□□□□□ -2.21
YBX1P67809 Y_RNA.258-201ENST00000364613 105 ntBASIC1.23□□□□□ -2.21
YBX1P67809 RNU6-895P-201ENST00000384125 103 ntBASIC1.23□□□□□ -2.21
YBX1P67809 RNU6-939P-201ENST00000384634 107 ntBASIC1.23□□□□□ -2.21
YBX1P67809 MIR617-201ENST00000385030 97 ntBASIC1.23□□□□□ -2.21
YBX1P67809 MIR216B-201ENST00000390186 82 ntBASIC1.23□□□□□ -2.21
YBX1P67809 SNORA40.6-201ENST00000391153 128 ntBASIC1.23□□□□□ -2.21
YBX1P67809 U7.7-201ENST00000459276 60 ntBASIC1.23□□□□□ -2.21
YBX1P67809 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.23□□□□□ -2.21
YBX1P67809 MIR6788-201ENST00000618842 66 ntBASIC1.23□□□□□ -2.21
YBX1P67809 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
YBX1P67809 MIR26B-201ENST00000362251 77 ntBASIC1.22□□□□□ -2.21
YBX1P67809 Y_RNA.340-201ENST00000365330 92 ntBASIC1.22□□□□□ -2.21
YBX1P67809 MIR150-201ENST00000385048 84 ntBASIC1.22□□□□□ -2.21
YBX1P67809 RNU6-663P-201ENST00000391105 106 ntBASIC1.22□□□□□ -2.21
YBX1P67809 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.22□□□□□ -2.21
YBX1P67809 RNU6-135P-201ENST00000516769 101 ntBASIC1.22□□□□□ -2.21
YBX1P67809 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.22□□□□□ -2.21
YBX1P67809 SNORD45A-201ENST00000384512 84 ntBASIC1.21□□□□□ -2.22
YBX1P67809 MIR548L-201ENST00000408303 86 ntBASIC1.21□□□□□ -2.22
YBX1P67809 AC244098.3-201ENST00000424803 96 ntBASIC1.21□□□□□ -2.22
YBX1P67809 AL691482.2-201ENST00000457453 84 ntBASIC1.21□□□□□ -2.22
YBX1P67809 AC244669.1-204ENST00000621564 178 ntBASIC1.21□□□□□ -2.22
YBX1P67809 U6.111-201ENST00000636093 83 ntBASIC1.21□□□□□ -2.22
YBX1P67809 MIR520E-201ENST00000384867 87 ntBASIC1.2□□□□□ -2.22
YBX1P67809 MIR519E-201ENST00000385075 84 ntBASIC1.2□□□□□ -2.22
YBX1P67809 RPS29P1-201ENST00000465274 159 ntBASIC1.2□□□□□ -2.22
YBX1P67809 MIR4639-201ENST00000584938 69 ntBASIC1.2□□□□□ -2.22
YBX1P67809 RNU6-800P-201ENST00000384473 103 ntBASIC1.19□□□□□ -2.22
YBX1P67809 SNORD28-201ENST00000384706 75 ntBASIC1.19□□□□□ -2.22
YBX1P67809 MIR200A-201ENST00000384875 90 ntBASIC1.19□□□□□ -2.22
YBX1P67809 SNORD124-201ENST00000459577 104 ntBASIC1.19□□□□□ -2.22
YBX1P67809 RNU6-752P-201ENST00000516376 102 ntBASIC1.19□□□□□ -2.22
YBX1P67809 MIR8053-201ENST00000613344 75 ntBASIC1.19□□□□□ -2.22
YBX1P67809 Y_RNA.178-201ENST00000363832 102 ntBASIC1.18□□□□□ -2.22
YBX1P67809 MIR19B1-201ENST00000384829 87 ntBASIC1.18□□□□□ -2.22
YBX1P67809 RNU6-604P-201ENST00000390917 100 ntBASIC1.18□□□□□ -2.22
YBX1P67809 SNORD75.2-201ENST00000408784 58 ntBASIC1.18□□□□□ -2.22
YBX1P67809 MIR548J-201ENST00000408833 112 ntBASIC1.18□□□□□ -2.22
YBX1P67809 NAMPTP3-201ENST00000569273 224 ntBASIC1.18□□□□□ -2.22
YBX1P67809 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
YBX1P67809 SNORD115-22-201ENST00000364456 82 ntBASIC1.17□□□□□ -2.22
YBX1P67809 RNU7-74P-201ENST00000459104 62 ntBASIC1.17□□□□□ -2.22
YBX1P67809 RNU6-881P-201ENST00000516813 102 ntBASIC1.17□□□□□ -2.22
YBX1P67809 MIR548O2-201ENST00000616090 70 ntBASIC1.17□□□□□ -2.22
YBX1P67809 RNU6-495P-201ENST00000362995 107 ntBASIC1.16□□□□□ -2.22
YBX1P67809 SNORD18A-201ENST00000363753 72 ntBASIC1.16□□□□□ -2.22
YBX1P67809 RNU1-124P-201ENST00000363861 145 ntBASIC1.16□□□□□ -2.22
YBX1P67809 MIR3678-201ENST00000578455 94 ntBASIC1.16□□□□□ -2.22
YBX1P67809 MIR3612-201ENST00000579753 87 ntBASIC1.16□□□□□ -2.22
YBX1P67809 RNU6-54P-201ENST00000365563 107 ntBASIC1.15□□□□□ -2.23
YBX1P67809 RNU6-716P-201ENST00000365621 103 ntBASIC1.15□□□□□ -2.23
YBX1P67809 MIR573-201ENST00000384964 99 ntBASIC1.15□□□□□ -2.23
YBX1P67809 RNU6-955P-201ENST00000410497 104 ntBASIC1.15□□□□□ -2.23
YBX1P67809 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.15□□□□□ -2.23
YBX1P67809 RN7SL793P-201ENST00000583259 296 ntBASIC1.15□□□□□ -2.23
YBX1P67809 MIR6509-201ENST00000614603 85 ntBASIC1.15□□□□□ -2.23
YBX1P67809 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
YBX1P67809 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.14□□□□□ -2.23
YBX1P67809 SNORD113.1-201ENST00000363280 73 ntBASIC1.14□□□□□ -2.23
YBX1P67809 RNU6-1335P-201ENST00000365426 107 ntBASIC1.14□□□□□ -2.23
YBX1P67809 Y_RNA.386-201ENST00000383913 105 ntBASIC1.14□□□□□ -2.23
YBX1P67809 RNU6V-201ENST00000384105 107 ntBASIC1.14□□□□□ -2.23
YBX1P67809 MIR203A-201ENST00000384836 110 ntBASIC1.14□□□□□ -2.23
YBX1P67809 SNORD41.1-201ENST00000391000 69 ntBASIC1.14□□□□□ -2.23
YBX1P67809 RNU6-630P-201ENST00000391258 106 ntBASIC1.14□□□□□ -2.23
YBX1P67809 RNU7-24P-201ENST00000458867 62 ntBASIC1.14□□□□□ -2.23
YBX1P67809 RNA5SP404-201ENST00000517118 132 ntBASIC1.14□□□□□ -2.23
YBX1P67809 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
YBX1P67809 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
YBX1P67809 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.13□□□□□ -2.23
YBX1P67809 RNU6-1039P-201ENST00000383931 107 ntBASIC1.13□□□□□ -2.23
YBX1P67809 RNA5SP47-201ENST00000517230 109 ntBASIC1.13□□□□□ -2.23
YBX1P67809 MIR4460-201ENST00000577862 86 ntBASIC1.13□□□□□ -2.23
YBX1P67809 AC025627.3-201ENST00000582078 182 ntBASIC1.13□□□□□ -2.23
YBX1P67809 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
YBX1P67809 RNU6-1216P-201ENST00000362590 107 ntBASIC1.12□□□□□ -2.23
YBX1P67809 RNU6-726P-201ENST00000364680 107 ntBASIC1.12□□□□□ -2.23
YBX1P67809 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 210.6 ms