Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 RNU7-104P-201ENST00000459398 79 ntBASIC1.23□□□□□ -2.21
RTP1P59025 AC097510.1-201ENST00000510945 133 ntBASIC1.23□□□□□ -2.21
RTP1P59025 MIR664A-201ENST00000626086 82 ntBASIC1.23□□□□□ -2.21
RTP1P59025 MIR373-201ENST00000362273 69 ntBASIC1.22□□□□□ -2.21
RTP1P59025 RNU6-824P-201ENST00000363724 104 ntBASIC1.22□□□□□ -2.21
RTP1P59025 RNU6-1335P-201ENST00000365426 107 ntBASIC1.22□□□□□ -2.21
RTP1P59025 RNU6-411P-201ENST00000384451 107 ntBASIC1.22□□□□□ -2.21
RTP1P59025 MIR200A-201ENST00000384875 90 ntBASIC1.22□□□□□ -2.21
RTP1P59025 U3.27-201ENST00000391237 200 ntBASIC1.22□□□□□ -2.21
RTP1P59025 RNU2-59P-201ENST00000410482 191 ntBASIC1.22□□□□□ -2.21
RTP1P59025 Y_RNA.606-201ENST00000410579 103 ntBASIC1.22□□□□□ -2.21
RTP1P59025 AC139453.2-201ENST00000487255 133 ntBASIC1.22□□□□□ -2.21
RTP1P59025 RNU6-70P-201ENST00000516438 60 ntBASIC1.22□□□□□ -2.21
RTP1P59025 AC211469.2-201ENST00000605461 205 ntBASIC1.22□□□□□ -2.21
RTP1P59025 RNU6-330P-201ENST00000363015 107 ntBASIC1.21□□□□□ -2.22
RTP1P59025 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
RTP1P59025 RNU6-154P-201ENST00000384306 106 ntBASIC1.2□□□□□ -2.22
RTP1P59025 SNORD28-201ENST00000384706 75 ntBASIC1.2□□□□□ -2.22
RTP1P59025 MIR216A-201ENST00000385063 110 ntBASIC1.2□□□□□ -2.22
RTP1P59025 MIR1285-1-201ENST00000408593 84 ntBASIC1.2□□□□□ -2.22
RTP1P59025 Y_RNA.681-201ENST00000516445 113 ntBASIC1.2□□□□□ -2.22
RTP1P59025 RNA5SP404-201ENST00000517118 132 ntBASIC1.2□□□□□ -2.22
RTP1P59025 RNU6-1015P-201ENST00000517121 99 ntBASIC1.2□□□□□ -2.22
RTP1P59025 MIR4639-201ENST00000584938 69 ntBASIC1.2□□□□□ -2.22
RTP1P59025 U6.81-201ENST00000612550 106 ntBASIC1.2□□□□□ -2.22
RTP1P59025 AC244669.1-204ENST00000621564 178 ntBASIC1.2□□□□□ -2.22
RTP1P59025 AC067863.3-201ENST00000624172 122 ntBASIC1.2□□□□□ -2.22
RTP1P59025 MIR573-201ENST00000384964 99 ntBASIC1.19□□□□□ -2.22
RTP1P59025 MIR617-201ENST00000385030 97 ntBASIC1.19□□□□□ -2.22
RTP1P59025 RNU6-1177P-201ENST00000391058 104 ntBASIC1.19□□□□□ -2.22
RTP1P59025 RNU6-135P-201ENST00000516769 101 ntBASIC1.19□□□□□ -2.22
RTP1P59025 RNU1-124P-201ENST00000363861 145 ntBASIC1.18□□□□□ -2.22
RTP1P59025 RNU6-681P-201ENST00000364012 104 ntBASIC1.18□□□□□ -2.22
RTP1P59025 RNU6-469P-201ENST00000516253 101 ntBASIC1.18□□□□□ -2.22
RTP1P59025 RNU6-687P-201ENST00000516443 89 ntBASIC1.18□□□□□ -2.22
RTP1P59025 CYP3A137P-201ENST00000562436 69 ntBASIC1.18□□□□□ -2.22
RTP1P59025 MIR3612-201ENST00000579753 87 ntBASIC1.18□□□□□ -2.22
RTP1P59025 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
RTP1P59025 Y_RNA.30-201ENST00000362572 97 ntBASIC1.17□□□□□ -2.22
RTP1P59025 SNORD18A-201ENST00000363753 72 ntBASIC1.17□□□□□ -2.22
RTP1P59025 Y_RNA.258-201ENST00000364613 105 ntBASIC1.17□□□□□ -2.22
RTP1P59025 MIR519E-201ENST00000385075 84 ntBASIC1.17□□□□□ -2.22
RTP1P59025 SNORD114-24-201ENST00000365029 72 ntBASIC1.16□□□□□ -2.22
RTP1P59025 SNORA8.1-201ENST00000384250 140 ntBASIC1.16□□□□□ -2.22
RTP1P59025 RNA5SP255-201ENST00000516370 107 ntBASIC1.16□□□□□ -2.22
RTP1P59025 MIR3678-201ENST00000578455 94 ntBASIC1.16□□□□□ -2.22
RTP1P59025 AC025627.3-201ENST00000582078 182 ntBASIC1.16□□□□□ -2.22
RTP1P59025 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
RTP1P59025 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.15□□□□□ -2.22
RTP1P59025 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
RTP1P59025 SNORD41.1-201ENST00000391000 69 ntBASIC1.15□□□□□ -2.23
RTP1P59025 SNORD114-21-201ENST00000606412 72 ntBASIC1.15□□□□□ -2.23
RTP1P59025 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
RTP1P59025 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.15□□□□□ -2.23
RTP1P59025 RNU6-382P-201ENST00000365181 106 ntBASIC1.14□□□□□ -2.23
RTP1P59025 RNU6-587P-201ENST00000391282 106 ntBASIC1.14□□□□□ -2.23
RTP1P59025 RNA5SP47-201ENST00000517230 109 ntBASIC1.14□□□□□ -2.23
RTP1P59025 MIR3973-201ENST00000579824 107 ntBASIC1.14□□□□□ -2.23
RTP1P59025 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.14□□□□□ -2.23
RTP1P59025 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.13□□□□□ -2.23
RTP1P59025 RNU6-726P-201ENST00000364680 107 ntBASIC1.13□□□□□ -2.23
RTP1P59025 MIR216B-201ENST00000390186 82 ntBASIC1.13□□□□□ -2.23
RTP1P59025 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
RTP1P59025 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.13□□□□□ -2.23
RTP1P59025 MIR3675-201ENST00000583661 73 ntBASIC1.13□□□□□ -2.23
RTP1P59025 MIR4773-1-201ENST00000637203 78 ntBASIC1.13□□□□□ -2.23
RTP1P59025 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
RTP1P59025 RNU4-38P-201ENST00000364472 129 ntBASIC1.12□□□□□ -2.23
RTP1P59025 RNU6-1241P-201ENST00000384536 107 ntBASIC1.12□□□□□ -2.23
RTP1P59025 SNORD99-201ENST00000408612 74 ntBASIC1.12□□□□□ -2.23
RTP1P59025 AC114801.3-201ENST00000510231 177 ntBASIC1.12□□□□□ -2.23
RTP1P59025 MIR548O2-201ENST00000616090 70 ntBASIC1.12□□□□□ -2.23
RTP1P59025 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.12□□□□□ -2.23
RTP1P59025 MIR532-201ENST00000385025 91 ntBASIC1.11□□□□□ -2.23
RTP1P59025 RNU6-634P-201ENST00000459134 106 ntBASIC1.11□□□□□ -2.23
RTP1P59025 MIR6857-201ENST00000613267 93 ntBASIC1.11□□□□□ -2.23
RTP1P59025 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
RTP1P59025 MIR548L-201ENST00000408303 86 ntBASIC1.1□□□□□ -2.23
RTP1P59025 AC244098.3-201ENST00000424803 96 ntBASIC1.1□□□□□ -2.23
RTP1P59025 AC093423.1-201ENST00000440817 142 ntBASIC1.1□□□□□ -2.23
RTP1P59025 RNU7-74P-201ENST00000459104 62 ntBASIC1.1□□□□□ -2.23
RTP1P59025 OR2A41P-201ENST00000473586 105 ntBASIC1.1□□□□□ -2.23
RTP1P59025 RNU6-871P-201ENST00000516122 100 ntBASIC1.1□□□□□ -2.23
RTP1P59025 AC011195.1-201ENST00000578177 177 ntBASIC1.1□□□□□ -2.23
RTP1P59025 MIR18A-201ENST00000362310 71 ntBASIC1.09□□□□□ -2.23
RTP1P59025 RNU6-495P-201ENST00000362995 107 ntBASIC1.09□□□□□ -2.23
RTP1P59025 RNU6-716P-201ENST00000365621 103 ntBASIC1.09□□□□□ -2.23
RTP1P59025 SNORD75.2-201ENST00000408784 58 ntBASIC1.09□□□□□ -2.23
RTP1P59025 RNU6-274P-201ENST00000459566 107 ntBASIC1.09□□□□□ -2.23
RTP1P59025 SCARNA16.5-201ENST00000517114 183 ntBASIC1.09□□□□□ -2.23
RTP1P59025 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.24
RTP1P59025 RNU6-54P-201ENST00000365563 107 ntBASIC1.08□□□□□ -2.24
RTP1P59025 MIR154-201ENST00000385243 84 ntBASIC1.08□□□□□ -2.24
RTP1P59025 SNORD115-31-201ENST00000365318 82 ntBASIC1.07□□□□□ -2.24
RTP1P59025 RNU7-24P-201ENST00000458867 62 ntBASIC1.07□□□□□ -2.24
RTP1P59025 NAMPTP3-201ENST00000569273 224 ntBASIC1.07□□□□□ -2.24
RTP1P59025 RNU6V-201ENST00000384105 107 ntBASIC1.06□□□□□ -2.24
RTP1P59025 RNU6-540P-201ENST00000384622 101 ntBASIC1.06□□□□□ -2.24
RTP1P59025 MIR193B-201ENST00000384907 83 ntBASIC1.06□□□□□ -2.24
RTP1P59025 RNU6-788P-201ENST00000390967 104 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 186.3 ms