Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.46□□□□□ -2.64
RPL28P46779 MIR8485-201ENST00000401372 91 ntBASIC-1.46□□□□□ -2.64
RPL28P46779 MIR548H3-201ENST00000408771 118 ntBASIC-1.46□□□□□ -2.64
RPL28P46779 AC026421.1-201ENST00000519101 163 ntBASIC-1.46□□□□□ -2.64
RPL28P46779 MIR3121-201ENST00000579680 77 ntBASIC-1.46□□□□□ -2.64
RPL28P46779 MIR3658-201ENST00000636291 56 ntBASIC-1.46□□□□□ -2.64
RPL28P46779 RNU6-312P-201ENST00000364629 107 ntBASIC-1.47□□□□□ -2.64
RPL28P46779 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.47□□□□□ -2.64
RPL28P46779 Y_RNA.435-201ENST00000384095 112 ntBASIC-1.47□□□□□ -2.64
RPL28P46779 RNU6-576P-201ENST00000390854 102 ntBASIC-1.47□□□□□ -2.64
RPL28P46779 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.47□□□□□ -2.64
RPL28P46779 SNORA33.1-201ENST00000364957 130 ntBASIC-1.48□□□□□ -2.65
RPL28P46779 MIR1255B2-201ENST00000408618 67 ntBASIC-1.48□□□□□ -2.65
RPL28P46779 RNU2-51P-201ENST00000410708 197 ntBASIC-1.48□□□□□ -2.65
RPL28P46779 RNU7-121P-201ENST00000516604 62 ntBASIC-1.48□□□□□ -2.65
RPL28P46779 MIR3064-201ENST00000581130 66 ntBASIC-1.48□□□□□ -2.65
RPL28P46779 AL160413.1-201ENST00000622780 310 ntBASIC-1.48□□□□□ -2.65
RPL28P46779 RNA5SP26-201ENST00000362406 119 ntBASIC-1.49□□□□□ -2.65
RPL28P46779 Y_RNA.216-201ENST00000364205 93 ntBASIC-1.49□□□□□ -2.65
RPL28P46779 SNORD115-22-201ENST00000364456 82 ntBASIC-1.49□□□□□ -2.65
RPL28P46779 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.49□□□□□ -2.65
RPL28P46779 RNU4-61P-201ENST00000411243 107 ntBASIC-1.49□□□□□ -2.65
RPL28P46779 snoU13.17-201ENST00000458802 104 ntBASIC-1.49□□□□□ -2.65
RPL28P46779 RNA5SP461-201ENST00000516451 104 ntBASIC-1.49□□□□□ -2.65
RPL28P46779 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.5□□□□□ -2.65
RPL28P46779 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.5□□□□□ -2.65
RPL28P46779 RNU6-260P-201ENST00000384092 107 ntBASIC-1.5□□□□□ -2.65
RPL28P46779 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.5□□□□□ -2.65
RPL28P46779 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.5□□□□□ -2.65
RPL28P46779 SNORD58.1-201ENST00000391313 66 ntBASIC-1.5□□□□□ -2.65
RPL28P46779 RNA5SP136-201ENST00000410906 107 ntBASIC-1.5□□□□□ -2.65
RPL28P46779 MTND2P23-201ENST00000422990 651 ntBASIC-1.5□□□□□ -2.65
RPL28P46779 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.5□□□□□ -2.65
RPL28P46779 AL513043.2-201ENST00000573941 143 ntBASIC-1.5□□□□□ -2.65
RPL28P46779 AL627230.5-201ENST00000619807 58 ntBASIC-1.5□□□□□ -2.65
RPL28P46779 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.51□□□□□ -2.65
RPL28P46779 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.51□□□□□ -2.65
RPL28P46779 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.51□□□□□ -2.65
RPL28P46779 MIR548U-201ENST00000390728 81 ntBASIC-1.51□□□□□ -2.65
RPL28P46779 RNU6-239P-201ENST00000390990 99 ntBASIC-1.51□□□□□ -2.65
RPL28P46779 SNORD37.2-201ENST00000391075 66 ntBASIC-1.51□□□□□ -2.65
RPL28P46779 MIR889-201ENST00000401280 79 ntBASIC-1.51□□□□□ -2.65
RPL28P46779 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.51□□□□□ -2.65
RPL28P46779 CYP3A54P-201ENST00000566950 75 ntBASIC-1.51□□□□□ -2.65
RPL28P46779 AC130289.1-201ENST00000577321 73 ntBASIC-1.51□□□□□ -2.65
RPL28P46779 MIR3171-201ENST00000584270 74 ntBASIC-1.51□□□□□ -2.65
RPL28P46779 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.51□□□□□ -2.65
RPL28P46779 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.52□□□□□ -2.65
RPL28P46779 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.52□□□□□ -2.65
RPL28P46779 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.52□□□□□ -2.65
RPL28P46779 AC022028.1-201ENST00000412054 408 ntBASIC-1.52□□□□□ -2.65
RPL28P46779 AC104996.3-201ENST00000590718 94 ntBASIC-1.52□□□□□ -2.65
RPL28P46779 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.52□□□□□ -2.65
RPL28P46779 Y_RNA.804-201ENST00000615262 101 ntBASIC-1.52□□□□□ -2.65
RPL28P46779 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.53□□□□□ -2.65
RPL28P46779 Y_RNA.138-201ENST00000363462 102 ntBASIC-1.53□□□□□ -2.65
RPL28P46779 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.53□□□□□ -2.65
RPL28P46779 RNU6-382P-201ENST00000365181 106 ntBASIC-1.53□□□□□ -2.65
RPL28P46779 Y_RNA.509-201ENST00000384506 99 ntBASIC-1.53□□□□□ -2.65
RPL28P46779 RNU6-816P-201ENST00000390914 107 ntBASIC-1.53□□□□□ -2.65
RPL28P46779 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.53□□□□□ -2.65
RPL28P46779 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.53□□□□□ -2.65
RPL28P46779 MIR1263-201ENST00000408324 86 ntBASIC-1.53□□□□□ -2.65
RPL28P46779 HLA-S-202ENST00000425174 53 ntBASIC-1.53□□□□□ -2.65
RPL28P46779 RNU6-1219P-201ENST00000516143 112 ntBASIC-1.53□□□□□ -2.65
RPL28P46779 RNA5SP147-201ENST00000516493 109 ntBASIC-1.53□□□□□ -2.65
RPL28P46779 RNU6-635P-201ENST00000516651 102 ntBASIC-1.53□□□□□ -2.65
RPL28P46779 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.53□□□□□ -2.65
RPL28P46779 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.54□□□□□ -2.66
RPL28P46779 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.54□□□□□ -2.66
RPL28P46779 SNORD90-201ENST00000391145 111 ntBASIC-1.54□□□□□ -2.66
RPL28P46779 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.54□□□□□ -2.66
RPL28P46779 AC020661.2-201ENST00000560114 134 ntBASIC-1.54□□□□□ -2.66
RPL28P46779 MIR198-201ENST00000637333 62 ntBASIC-1.54□□□□□ -2.66
RPL28P46779 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.55□□□□□ -2.66
RPL28P46779 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.55□□□□□ -2.66
RPL28P46779 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.55□□□□□ -2.66
RPL28P46779 Y_RNA.396-201ENST00000383949 103 ntBASIC-1.55□□□□□ -2.66
RPL28P46779 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.55□□□□□ -2.66
RPL28P46779 MIR577-201ENST00000385196 96 ntBASIC-1.55□□□□□ -2.66
RPL28P46779 MIR601-201ENST00000385256 79 ntBASIC-1.55□□□□□ -2.66
RPL28P46779 RNU2-38P-201ENST00000410856 79 ntBASIC-1.55□□□□□ -2.66
RPL28P46779 AL353691.2-201ENST00000443795 59 ntBASIC-1.55□□□□□ -2.66
RPL28P46779 RNU7-197P-201ENST00000458836 62 ntBASIC-1.55□□□□□ -2.66
RPL28P46779 MIR5591-201ENST00000578248 65 ntBASIC-1.55□□□□□ -2.66
RPL28P46779 AC006254.2-201ENST00000603259 279 ntBASIC-1.55□□□□□ -2.66
RPL28P46779 MIR6502-201ENST00000617296 76 ntBASIC-1.55□□□□□ -2.66
RPL28P46779 AC091912.2-201ENST00000624798 167 ntBASIC-1.55□□□□□ -2.66
RPL28P46779 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.55□□□□□ -2.66
RPL28P46779 SNORA2.1-201ENST00000363089 137 ntBASIC-1.56□□□□□ -2.66
RPL28P46779 Y_RNA.202-201ENST00000364083 110 ntBASIC-1.56□□□□□ -2.66
RPL28P46779 RNU6-151P-201ENST00000364158 107 ntBASIC-1.56□□□□□ -2.66
RPL28P46779 SNORD4B-201ENST00000459083 72 ntBASIC-1.56□□□□□ -2.66
RPL28P46779 RNU7-154P-201ENST00000516194 62 ntBASIC-1.56□□□□□ -2.66
RPL28P46779 RNU6-62P-201ENST00000516526 102 ntBASIC-1.56□□□□□ -2.66
RPL28P46779 MIR4770-201ENST00000579149 58 ntBASIC-1.56□□□□□ -2.66
RPL28P46779 RNU6-238P-201ENST00000363313 106 ntBASIC-1.57□□□□□ -2.66
RPL28P46779 RNU6-164P-201ENST00000364604 103 ntBASIC-1.57□□□□□ -2.66
RPL28P46779 Y_RNA.460-201ENST00000384255 102 ntBASIC-1.57□□□□□ -2.66
RPL28P46779 MIR203A-201ENST00000384836 110 ntBASIC-1.57□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 257.9 ms