Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 AC211469.2-201ENST00000605461 205 ntBASIC1.23□□□□□ -2.21
CTGFP29279 MIR101-2-201ENST00000362195 79 ntBASIC1.22□□□□□ -2.21
CTGFP29279 RNU6-1260P-201ENST00000362944 107 ntBASIC1.22□□□□□ -2.21
CTGFP29279 RNA5SP192-201ENST00000364404 120 ntBASIC1.22□□□□□ -2.21
CTGFP29279 MIR599-201ENST00000385069 95 ntBASIC1.22□□□□□ -2.21
CTGFP29279 SNORD111-201ENST00000408139 94 ntBASIC1.22□□□□□ -2.21
CTGFP29279 MIR18B-201ENST00000454574 71 ntBASIC1.22□□□□□ -2.21
CTGFP29279 AC097510.1-201ENST00000510945 133 ntBASIC1.22□□□□□ -2.21
CTGFP29279 SNORA40.17-201ENST00000517256 115 ntBASIC1.22□□□□□ -2.21
CTGFP29279 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.22□□□□□ -2.21
CTGFP29279 SNORD114-21-201ENST00000606412 72 ntBASIC1.22□□□□□ -2.21
CTGFP29279 AC106800.4-201ENST00000614905 153 ntBASIC1.22□□□□□ -2.21
CTGFP29279 RNA5SP327-201ENST00000362494 101 ntBASIC1.21□□□□□ -2.22
CTGFP29279 SNORD26-201ENST00000384147 75 ntBASIC1.21□□□□□ -2.22
CTGFP29279 SNORA25-201ENST00000384384 134 ntBASIC1.21□□□□□ -2.22
CTGFP29279 SNORA75.1-201ENST00000391130 148 ntBASIC1.21□□□□□ -2.22
CTGFP29279 RNU6-287P-201ENST00000516230 98 ntBASIC1.21□□□□□ -2.22
CTGFP29279 RNU6-1265P-201ENST00000516342 103 ntBASIC1.21□□□□□ -2.22
CTGFP29279 CYP3A137P-201ENST00000562436 69 ntBASIC1.21□□□□□ -2.22
CTGFP29279 AC023827.1-201ENST00000569247 97 ntBASIC1.21□□□□□ -2.22
CTGFP29279 MIR6082-201ENST00000613604 109 ntBASIC1.21□□□□□ -2.22
CTGFP29279 AC092634.7-201ENST00000621022 103 ntBASIC1.21□□□□□ -2.22
CTGFP29279 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
CTGFP29279 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
CTGFP29279 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
CTGFP29279 RNU6-1177P-201ENST00000391058 104 ntBASIC1.2□□□□□ -2.22
CTGFP29279 RNU6-935P-201ENST00000410371 100 ntBASIC1.2□□□□□ -2.22
CTGFP29279 AC244098.3-201ENST00000424803 96 ntBASIC1.2□□□□□ -2.22
CTGFP29279 AC008608.1-201ENST00000603910 127 ntBASIC1.2□□□□□ -2.22
CTGFP29279 AC103706.3-201ENST00000636297 85 ntBASIC1.19□□□□□ -2.22
CTGFP29279 Y_RNA.56-201ENST00000362798 112 ntBASIC1.18□□□□□ -2.22
CTGFP29279 RNU6-54P-201ENST00000365563 107 ntBASIC1.18□□□□□ -2.22
CTGFP29279 MIR519A1-201ENST00000385257 85 ntBASIC1.18□□□□□ -2.22
CTGFP29279 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.18□□□□□ -2.22
CTGFP29279 RNU6-955P-201ENST00000410497 104 ntBASIC1.18□□□□□ -2.22
CTGFP29279 SNORD42B-201ENST00000458893 67 ntBASIC1.18□□□□□ -2.22
CTGFP29279 MIR4771-2-201ENST00000577758 74 ntBASIC1.18□□□□□ -2.22
CTGFP29279 MIR4771-1-201ENST00000582617 74 ntBASIC1.18□□□□□ -2.22
CTGFP29279 MIR8053-201ENST00000613344 75 ntBASIC1.18□□□□□ -2.22
CTGFP29279 AC027335.2-201ENST00000624030 375 ntBASIC1.18□□□□□ -2.22
CTGFP29279 RNU6-990P-201ENST00000364385 104 ntBASIC1.17□□□□□ -2.22
CTGFP29279 RNU6-669P-201ENST00000365575 107 ntBASIC1.17□□□□□ -2.22
CTGFP29279 MIR216A-201ENST00000385063 110 ntBASIC1.17□□□□□ -2.22
CTGFP29279 RPS29P23-201ENST00000458635 123 ntBASIC1.17□□□□□ -2.22
CTGFP29279 RNU7-40P-201ENST00000516397 64 ntBASIC1.17□□□□□ -2.22
CTGFP29279 RNA5SP147-201ENST00000516493 109 ntBASIC1.17□□□□□ -2.22
CTGFP29279 MIR548H5-201ENST00000580314 60 ntBASIC1.17□□□□□ -2.22
CTGFP29279 MIR466-201ENST00000580653 84 ntBASIC1.17□□□□□ -2.22
CTGFP29279 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
CTGFP29279 RNU4-38P-201ENST00000364472 129 ntBASIC1.16□□□□□ -2.22
CTGFP29279 RNU6-934P-201ENST00000365154 107 ntBASIC1.16□□□□□ -2.22
CTGFP29279 RNY4P3-201ENST00000365254 95 ntBASIC1.16□□□□□ -2.22
CTGFP29279 MIR1257-201ENST00000408490 117 ntBASIC1.16□□□□□ -2.22
CTGFP29279 RNU6-994P-201ENST00000410507 111 ntBASIC1.16□□□□□ -2.22
CTGFP29279 AC002429.1-201ENST00000437672 148 ntBASIC1.16□□□□□ -2.22
CTGFP29279 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.16□□□□□ -2.22
CTGFP29279 AC097635.1-201ENST00000450678 155 ntBASIC1.16□□□□□ -2.22
CTGFP29279 AL691482.2-201ENST00000457453 84 ntBASIC1.16□□□□□ -2.22
CTGFP29279 RNU6-1057P-201ENST00000517162 102 ntBASIC1.16□□□□□ -2.22
CTGFP29279 MIR7974-201ENST00000615835 79 ntBASIC1.16□□□□□ -2.22
CTGFP29279 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
CTGFP29279 RNU6-535P-201ENST00000384722 107 ntBASIC1.15□□□□□ -2.23
CTGFP29279 RNU6-274P-201ENST00000459566 107 ntBASIC1.15□□□□□ -2.23
CTGFP29279 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.15□□□□□ -2.23
CTGFP29279 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
CTGFP29279 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
CTGFP29279 Y_RNA.32-201ENST00000362589 110 ntBASIC1.14□□□□□ -2.23
CTGFP29279 RNU6-1039P-201ENST00000383931 107 ntBASIC1.14□□□□□ -2.23
CTGFP29279 RNU6-936P-201ENST00000384005 107 ntBASIC1.14□□□□□ -2.23
CTGFP29279 MIR19B1-201ENST00000384829 87 ntBASIC1.14□□□□□ -2.23
CTGFP29279 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.14□□□□□ -2.23
CTGFP29279 MIR3920-201ENST00000581751 86 ntBASIC1.14□□□□□ -2.23
CTGFP29279 MIR6509-201ENST00000614603 85 ntBASIC1.14□□□□□ -2.23
CTGFP29279 AC069503.3-201ENST00000618674 145 ntBASIC1.14□□□□□ -2.23
CTGFP29279 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.14□□□□□ -2.23
CTGFP29279 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
CTGFP29279 SNORA25.5-201ENST00000363782 126 ntBASIC1.13□□□□□ -2.23
CTGFP29279 RNU6-645P-201ENST00000364649 106 ntBASIC1.13□□□□□ -2.23
CTGFP29279 RNU6-260P-201ENST00000384092 107 ntBASIC1.13□□□□□ -2.23
CTGFP29279 MIR532-201ENST00000385025 91 ntBASIC1.13□□□□□ -2.23
CTGFP29279 MIR125B2-201ENST00000385128 89 ntBASIC1.13□□□□□ -2.23
CTGFP29279 RPS26P5-201ENST00000418544 335 ntBASIC1.13□□□□□ -2.23
CTGFP29279 snoU13.13-201ENST00000458842 104 ntBASIC1.13□□□□□ -2.23
CTGFP29279 RNU7-161P-201ENST00000517289 62 ntBASIC1.13□□□□□ -2.23
CTGFP29279 MIR4698-201ENST00000577795 80 ntBASIC1.13□□□□□ -2.23
CTGFP29279 MIR4676-201ENST00000583078 72 ntBASIC1.13□□□□□ -2.23
CTGFP29279 RNU6-1312P-201ENST00000362425 108 ntBASIC1.12□□□□□ -2.23
CTGFP29279 RNU6-495P-201ENST00000362995 107 ntBASIC1.12□□□□□ -2.23
CTGFP29279 RNU6-668P-201ENST00000364180 107 ntBASIC1.12□□□□□ -2.23
CTGFP29279 Y_RNA.375-201ENST00000365625 101 ntBASIC1.12□□□□□ -2.23
CTGFP29279 RNA5SP299-201ENST00000391203 116 ntBASIC1.12□□□□□ -2.23
CTGFP29279 AC067940.1-201ENST00000458411 300 ntBASIC1.12□□□□□ -2.23
CTGFP29279 RNU7-102P-201ENST00000458948 62 ntBASIC1.12□□□□□ -2.23
CTGFP29279 SNORA31.14-201ENST00000516728 116 ntBASIC1.12□□□□□ -2.23
CTGFP29279 MIR4714-201ENST00000580728 77 ntBASIC1.12□□□□□ -2.23
CTGFP29279 MIR548V-201ENST00000584165 80 ntBASIC1.12□□□□□ -2.23
CTGFP29279 MIR3657-201ENST00000584818 117 ntBASIC1.12□□□□□ -2.23
CTGFP29279 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.12□□□□□ -2.23
CTGFP29279 MIR26B-201ENST00000362251 77 ntBASIC1.11□□□□□ -2.23
CTGFP29279 SNORA25.8-201ENST00000364831 128 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 299.1 ms