Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 MIR6514-201ENST00000622549 70 ntBASIC-0.13□□□□□ -2.43
COL5A3P25940 RNU6-704P-201ENST00000364162 103 ntBASIC-0.13□□□□□ -2.43
COL5A3P25940 SNORD50.2-201ENST00000365465 70 ntBASIC-0.13□□□□□ -2.43
COL5A3P25940 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.13□□□□□ -2.43
COL5A3P25940 RNU7-107P-201ENST00000459121 61 ntBASIC-0.13□□□□□ -2.43
COL5A3P25940 RNU6-75P-201ENST00000515944 104 ntBASIC-0.13□□□□□ -2.43
COL5A3P25940 RNU6-175P-201ENST00000516896 107 ntBASIC-0.13□□□□□ -2.43
COL5A3P25940 MIR4460-201ENST00000577862 86 ntBASIC-0.13□□□□□ -2.43
COL5A3P25940 TRDV1-202ENST00000621643 102 ntBASIC-0.13□□□□□ -2.43
COL5A3P25940 SNORA32.1-201ENST00000364514 115 ntBASIC-0.14□□□□□ -2.43
COL5A3P25940 RNY1P5-201ENST00000383890 115 ntBASIC-0.14□□□□□ -2.43
COL5A3P25940 RNU6-959P-201ENST00000384671 107 ntBASIC-0.14□□□□□ -2.43
COL5A3P25940 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.14□□□□□ -2.43
COL5A3P25940 AL513043.2-201ENST00000573941 143 ntBASIC-0.14□□□□□ -2.43
COL5A3P25940 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.15□□□□□ -2.43
COL5A3P25940 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.15□□□□□ -2.43
COL5A3P25940 SNORD101-201ENST00000384027 73 ntBASIC-0.15□□□□□ -2.43
COL5A3P25940 SNORA51.5-201ENST00000384126 131 ntBASIC-0.15□□□□□ -2.43
COL5A3P25940 MIR548A3-201ENST00000385297 97 ntBASIC-0.15□□□□□ -2.43
COL5A3P25940 MIR548I1-201ENST00000408810 149 ntBASIC-0.15□□□□□ -2.43
COL5A3P25940 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.15□□□□□ -2.43
COL5A3P25940 SNORD4A-201ENST00000459174 72 ntBASIC-0.15□□□□□ -2.43
COL5A3P25940 MIR5009-201ENST00000578736 100 ntBASIC-0.15□□□□□ -2.43
COL5A3P25940 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.15□□□□□ -2.43
COL5A3P25940 SNORD114-4-201ENST00000363962 75 ntBASIC-0.16□□□□□ -2.43
COL5A3P25940 SNORD45B-201ENST00000364617 72 ntBASIC-0.16□□□□□ -2.43
COL5A3P25940 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.16□□□□□ -2.43
COL5A3P25940 AL353813.1-201ENST00000440700 253 ntBASIC-0.16□□□□□ -2.43
COL5A3P25940 RNU6-65P-201ENST00000516332 98 ntBASIC-0.16□□□□□ -2.43
COL5A3P25940 RNU6-255P-201ENST00000516957 105 ntBASIC-0.16□□□□□ -2.43
COL5A3P25940 MIR6507-201ENST00000613630 70 ntBASIC-0.16□□□□□ -2.43
COL5A3P25940 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.16□□□□□ -2.43
COL5A3P25940 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.16□□□□□ -2.44
COL5A3P25940 RNU4-36P-201ENST00000364294 144 ntBASIC-0.16□□□□□ -2.44
COL5A3P25940 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.16□□□□□ -2.44
COL5A3P25940 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.16□□□□□ -2.44
COL5A3P25940 AC025521.1-201ENST00000621624 286 ntBASIC-0.16□□□□□ -2.44
COL5A3P25940 RNU6-774P-201ENST00000363238 107 ntBASIC-0.17□□□□□ -2.44
COL5A3P25940 SNORD58A-201ENST00000383875 65 ntBASIC-0.17□□□□□ -2.44
COL5A3P25940 RNU6-209P-201ENST00000384118 107 ntBASIC-0.17□□□□□ -2.44
COL5A3P25940 RNU6-154P-201ENST00000384306 106 ntBASIC-0.17□□□□□ -2.44
COL5A3P25940 MIR652-201ENST00000385278 98 ntBASIC-0.17□□□□□ -2.44
COL5A3P25940 U3.27-201ENST00000391237 200 ntBASIC-0.17□□□□□ -2.44
COL5A3P25940 MIR876-201ENST00000401147 81 ntBASIC-0.17□□□□□ -2.44
COL5A3P25940 MIR548M-201ENST00000408260 86 ntBASIC-0.17□□□□□ -2.44
COL5A3P25940 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.17□□□□□ -2.44
COL5A3P25940 RNU6-659P-201ENST00000516454 104 ntBASIC-0.17□□□□□ -2.44
COL5A3P25940 MIR4694-201ENST00000578534 80 ntBASIC-0.17□□□□□ -2.44
COL5A3P25940 MIR4263-201ENST00000584745 83 ntBASIC-0.17□□□□□ -2.44
COL5A3P25940 MIR365A-201ENST00000362260 87 ntBASIC-0.18□□□□□ -2.44
COL5A3P25940 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.18□□□□□ -2.44
COL5A3P25940 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.18□□□□□ -2.44
COL5A3P25940 RNU7-85P-201ENST00000458851 63 ntBASIC-0.18□□□□□ -2.44
COL5A3P25940 SNORD2-201ENST00000459163 69 ntBASIC-0.18□□□□□ -2.44
COL5A3P25940 RNU6-412P-201ENST00000516434 106 ntBASIC-0.18□□□□□ -2.44
COL5A3P25940 MIR4439-201ENST00000583746 80 ntBASIC-0.18□□□□□ -2.44
COL5A3P25940 MIR8064-201ENST00000612863 90 ntBASIC-0.18□□□□□ -2.44
COL5A3P25940 MIR548O2-201ENST00000616090 70 ntBASIC-0.18□□□□□ -2.44
COL5A3P25940 MIR655-201ENST00000362159 97 ntBASIC-0.18□□□□□ -2.44
COL5A3P25940 RNY3P2-201ENST00000362918 102 ntBASIC-0.18□□□□□ -2.44
COL5A3P25940 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.18□□□□□ -2.44
COL5A3P25940 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.18□□□□□ -2.44
COL5A3P25940 RNU6-320P-201ENST00000516511 106 ntBASIC-0.18□□□□□ -2.44
COL5A3P25940 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.18□□□□□ -2.44
COL5A3P25940 MIR3914-2-201ENST00000637339 95 ntBASIC-0.18□□□□□ -2.44
COL5A3P25940 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.19□□□□□ -2.44
COL5A3P25940 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.19□□□□□ -2.44
COL5A3P25940 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.19□□□□□ -2.44
COL5A3P25940 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.19□□□□□ -2.44
COL5A3P25940 RNU6-466P-201ENST00000391224 103 ntBASIC-0.19□□□□□ -2.44
COL5A3P25940 SNORD4B-201ENST00000459083 72 ntBASIC-0.19□□□□□ -2.44
COL5A3P25940 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.19□□□□□ -2.44
COL5A3P25940 MIR3133-201ENST00000583157 78 ntBASIC-0.19□□□□□ -2.44
COL5A3P25940 MIR548AE1-201ENST00000583292 70 ntBASIC-0.19□□□□□ -2.44
COL5A3P25940 AL035470.1-201ENST00000622571 220 ntBASIC-0.19□□□□□ -2.44
COL5A3P25940 RNU6-746P-201ENST00000384112 109 ntBASIC-0.2□□□□□ -2.44
COL5A3P25940 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.2□□□□□ -2.44
COL5A3P25940 RNA5SP300-201ENST00000391197 107 ntBASIC-0.2□□□□□ -2.44
COL5A3P25940 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.2□□□□□ -2.44
COL5A3P25940 Y_RNA.703-201ENST00000516846 111 ntBASIC-0.2□□□□□ -2.44
COL5A3P25940 AP000676.1-201ENST00000533307 52 ntBASIC-0.2□□□□□ -2.44
COL5A3P25940 MIR3668-201ENST00000582138 75 ntBASIC-0.2□□□□□ -2.44
COL5A3P25940 MIR3666-201ENST00000607845 111 ntBASIC-0.2□□□□□ -2.44
COL5A3P25940 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.21□□□□□ -2.44
COL5A3P25940 RNU6-132P-201ENST00000383863 107 ntBASIC-0.21□□□□□ -2.44
COL5A3P25940 RNU6-644P-201ENST00000391155 98 ntBASIC-0.21□□□□□ -2.44
COL5A3P25940 AC244090.1-201ENST00000441884 93 ntBASIC-0.21□□□□□ -2.44
COL5A3P25940 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.21□□□□□ -2.44
COL5A3P25940 RNU6-795P-201ENST00000516323 103 ntBASIC-0.21□□□□□ -2.44
COL5A3P25940 MIR4777-201ENST00000583710 86 ntBASIC-0.21□□□□□ -2.44
COL5A3P25940 MIR548Z-201ENST00000584743 97 ntBASIC-0.21□□□□□ -2.44
COL5A3P25940 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.21□□□□□ -2.44
COL5A3P25940 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.21□□□□□ -2.44
COL5A3P25940 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.21□□□□□ -2.44
COL5A3P25940 RNU6-811P-201ENST00000384069 107 ntBASIC-0.21□□□□□ -2.44
COL5A3P25940 RNU6-813P-201ENST00000384691 107 ntBASIC-0.21□□□□□ -2.44
COL5A3P25940 MTATP6P29-201ENST00000415057 132 ntBASIC-0.21□□□□□ -2.44
COL5A3P25940 AC244250.2-201ENST00000418731 148 ntBASIC-0.21□□□□□ -2.44
COL5A3P25940 SCARNA23-201ENST00000516060 130 ntBASIC-0.21□□□□□ -2.44
COL5A3P25940 SNORD33.1-201ENST00000516213 88 ntBASIC-0.21□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 260.4 ms