Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 MIR204-201ENST00000385200 110 ntBASIC-0.64□□□□□ -2.51
VIMP08670 RNU6-75P-201ENST00000515944 104 ntBASIC-0.64□□□□□ -2.51
VIMP08670 RNY3P2-201ENST00000362918 102 ntBASIC-0.65□□□□□ -2.51
VIMP08670 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.65□□□□□ -2.51
VIMP08670 MIR9-2-201ENST00000384838 87 ntBASIC-0.65□□□□□ -2.51
VIMP08670 MIR451A-201ENST00000385059 72 ntBASIC-0.65□□□□□ -2.51
VIMP08670 RNU6-758P-201ENST00000516292 89 ntBASIC-0.65□□□□□ -2.51
VIMP08670 RNU6-255P-201ENST00000516957 105 ntBASIC-0.65□□□□□ -2.51
VIMP08670 AC068339.1-201ENST00000526965 141 ntBASIC-0.65□□□□□ -2.51
VIMP08670 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.65□□□□□ -2.51
VIMP08670 RNU6-901P-201ENST00000384593 106 ntBASIC-0.66□□□□□ -2.52
VIMP08670 RNY1P7-201ENST00000384743 110 ntBASIC-0.66□□□□□ -2.52
VIMP08670 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.66□□□□□ -2.52
VIMP08670 AC021146.6-201ENST00000514659 117 ntBASIC-0.66□□□□□ -2.52
VIMP08670 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.66□□□□□ -2.52
VIMP08670 RNU6-971P-201ENST00000516920 106 ntBASIC-0.66□□□□□ -2.52
VIMP08670 AC108676.2-201ENST00000605225 163 ntBASIC-0.66□□□□□ -2.52
VIMP08670 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.67□□□□□ -2.52
VIMP08670 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.67□□□□□ -2.52
VIMP08670 Z95118.1-201ENST00000421372 247 ntBASIC-0.67□□□□□ -2.52
VIMP08670 RNU6-65P-201ENST00000516332 98 ntBASIC-0.67□□□□□ -2.52
VIMP08670 RNU6-762P-201ENST00000517107 102 ntBASIC-0.67□□□□□ -2.52
VIMP08670 MIR3613-201ENST00000579844 87 ntBASIC-0.67□□□□□ -2.52
VIMP08670 MIR4636-201ENST00000582271 80 ntBASIC-0.67□□□□□ -2.52
VIMP08670 RNA5SP368-201ENST00000364298 116 ntBASIC-0.68□□□□□ -2.52
VIMP08670 RNU6-900P-201ENST00000384498 102 ntBASIC-0.68□□□□□ -2.52
VIMP08670 SNORD56B-201ENST00000384713 71 ntBASIC-0.68□□□□□ -2.52
VIMP08670 MIR196A1-201ENST00000388006 70 ntBASIC-0.68□□□□□ -2.52
VIMP08670 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.68□□□□□ -2.52
VIMP08670 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.68□□□□□ -2.52
VIMP08670 RNU6-794P-201ENST00000517261 64 ntBASIC-0.68□□□□□ -2.52
VIMP08670 MIR4536-1-201ENST00000583537 88 ntBASIC-0.68□□□□□ -2.52
VIMP08670 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.69□□□□□ -2.52
VIMP08670 SNORD50.2-201ENST00000365465 70 ntBASIC-0.69□□□□□ -2.52
VIMP08670 RNU6-54P-201ENST00000365563 107 ntBASIC-0.69□□□□□ -2.52
VIMP08670 RNY1P5-201ENST00000383890 115 ntBASIC-0.69□□□□□ -2.52
VIMP08670 SNORA49-201ENST00000386157 136 ntBASIC-0.69□□□□□ -2.52
VIMP08670 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.69□□□□□ -2.52
VIMP08670 snoU13.13-201ENST00000458842 104 ntBASIC-0.69□□□□□ -2.52
VIMP08670 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.69□□□□□ -2.52
VIMP08670 AL513043.2-201ENST00000573941 143 ntBASIC-0.69□□□□□ -2.52
VIMP08670 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.7□□□□□ -2.52
VIMP08670 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.7□□□□□ -2.52
VIMP08670 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.7□□□□□ -2.52
VIMP08670 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.7□□□□□ -2.52
VIMP08670 MIR3914-2-201ENST00000637339 95 ntBASIC-0.7□□□□□ -2.52
VIMP08670 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.71□□□□□ -2.52
VIMP08670 MIR548A1-201ENST00000385041 97 ntBASIC-0.71□□□□□ -2.52
VIMP08670 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.71□□□□□ -2.52
VIMP08670 U3.27-201ENST00000391237 200 ntBASIC-0.71□□□□□ -2.52
VIMP08670 AC097510.1-201ENST00000510945 133 ntBASIC-0.71□□□□□ -2.52
VIMP08670 MIR5009-201ENST00000578736 100 ntBASIC-0.71□□□□□ -2.52
VIMP08670 MIR4439-201ENST00000583746 80 ntBASIC-0.71□□□□□ -2.52
VIMP08670 MIR6779-201ENST00000617283 64 ntBASIC-0.71□□□□□ -2.52
VIMP08670 SNORD45B-201ENST00000364617 72 ntBASIC-0.72□□□□□ -2.52
VIMP08670 SNORD83B-201ENST00000386745 93 ntBASIC-0.72□□□□□ -2.52
VIMP08670 SNORA13-201ENST00000458790 133 ntBASIC-0.72□□□□□ -2.52
VIMP08670 RNU7-85P-201ENST00000458851 63 ntBASIC-0.72□□□□□ -2.52
VIMP08670 SNORD33.1-201ENST00000516213 88 ntBASIC-0.72□□□□□ -2.52
VIMP08670 SNORD38.3-201ENST00000516599 73 ntBASIC-0.72□□□□□ -2.52
VIMP08670 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.72□□□□□ -2.52
VIMP08670 AC145423.2-201ENST00000610631 239 ntBASIC-0.72□□□□□ -2.52
VIMP08670 SNORD115-25-201ENST00000362619 82 ntBASIC-0.73□□□□□ -2.53
VIMP08670 SNORD95.1-201ENST00000364099 68 ntBASIC-0.73□□□□□ -2.53
VIMP08670 RNU6-80P-201ENST00000384195 107 ntBASIC-0.73□□□□□ -2.53
VIMP08670 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.73□□□□□ -2.53
VIMP08670 MIR582-201ENST00000365731 98 ntBASIC-0.74□□□□□ -2.53
VIMP08670 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.74□□□□□ -2.53
VIMP08670 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.74□□□□□ -2.53
VIMP08670 RNU6-719P-201ENST00000516671 104 ntBASIC-0.74□□□□□ -2.53
VIMP08670 MIR4280-201ENST00000582178 76 ntBASIC-0.74□□□□□ -2.53
VIMP08670 MIR6851-201ENST00000617060 67 ntBASIC-0.74□□□□□ -2.53
VIMP08670 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.75□□□□□ -2.53
VIMP08670 RNU6-907P-201ENST00000390924 102 ntBASIC-0.75□□□□□ -2.53
VIMP08670 SNORD2-201ENST00000459163 69 ntBASIC-0.75□□□□□ -2.53
VIMP08670 FGF7P7-201ENST00000514120 227 ntBASIC-0.75□□□□□ -2.53
VIMP08670 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.75□□□□□ -2.53
VIMP08670 SCARNA17-201ENST00000516183 144 ntBASIC-0.75□□□□□ -2.53
VIMP08670 SNORA40.17-201ENST00000517256 115 ntBASIC-0.75□□□□□ -2.53
VIMP08670 RNU6-502P-201ENST00000362419 108 ntBASIC-0.76□□□□□ -2.53
VIMP08670 SNORD114-4-201ENST00000363962 75 ntBASIC-0.76□□□□□ -2.53
VIMP08670 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.76□□□□□ -2.53
VIMP08670 MIR548A3-201ENST00000385297 97 ntBASIC-0.76□□□□□ -2.53
VIMP08670 RNU6-881P-201ENST00000516813 102 ntBASIC-0.76□□□□□ -2.53
VIMP08670 AC103810.7-201ENST00000607821 91 ntBASIC-0.76□□□□□ -2.53
VIMP08670 U6.95-201ENST00000636931 70 ntBASIC-0.76□□□□□ -2.53
VIMP08670 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.77□□□□□ -2.53
VIMP08670 RNU6-813P-201ENST00000384691 107 ntBASIC-0.77□□□□□ -2.53
VIMP08670 MIR1265-201ENST00000408444 86 ntBASIC-0.77□□□□□ -2.53
VIMP08670 RNU7-55P-201ENST00000459426 62 ntBASIC-0.77□□□□□ -2.53
VIMP08670 RNU6-659P-201ENST00000516454 104 ntBASIC-0.77□□□□□ -2.53
VIMP08670 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.78□□□□□ -2.53
VIMP08670 RNU6-132P-201ENST00000383863 107 ntBASIC-0.78□□□□□ -2.53
VIMP08670 RNU6-644P-201ENST00000391155 98 ntBASIC-0.78□□□□□ -2.53
VIMP08670 MIR548E-201ENST00000408287 88 ntBASIC-0.78□□□□□ -2.53
VIMP08670 RNA5SP25-201ENST00000410815 110 ntBASIC-0.78□□□□□ -2.53
VIMP08670 SNORD42B-201ENST00000458893 67 ntBASIC-0.78□□□□□ -2.53
VIMP08670 MIR5704-201ENST00000584029 77 ntBASIC-0.78□□□□□ -2.53
VIMP08670 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.79□□□□□ -2.54
VIMP08670 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.79□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 202 ms