Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 SNORD42B-201ENST00000458893 67 ntBASIC-1.31□□□□□ -2.62
SIRPB1O00241 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.31□□□□□ -2.62
SIRPB1O00241 RNY4P3-201ENST00000365254 95 ntBASIC-1.32□□□□□ -2.62
SIRPB1O00241 MTCYBP9-201ENST00000431021 303 ntBASIC-1.32□□□□□ -2.62
SIRPB1O00241 snoU83B.1-201ENST00000517136 88 ntBASIC-1.32□□□□□ -2.62
SIRPB1O00241 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.32□□□□□ -2.62
SIRPB1O00241 SNORD114-17-201ENST00000364699 75 ntBASIC-1.33□□□□□ -2.62
SIRPB1O00241 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.33□□□□□ -2.62
SIRPB1O00241 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.33□□□□□ -2.62
SIRPB1O00241 RNU6-706P-201ENST00000517229 104 ntBASIC-1.33□□□□□ -2.62
SIRPB1O00241 MIR6773-201ENST00000612812 74 ntBASIC-1.33□□□□□ -2.62
SIRPB1O00241 SNORD115-23-201ENST00000364461 82 ntBASIC-1.34□□□□□ -2.62
SIRPB1O00241 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.34□□□□□ -2.62
SIRPB1O00241 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.34□□□□□ -2.62
SIRPB1O00241 RNU6-75P-201ENST00000515944 104 ntBASIC-1.34□□□□□ -2.62
SIRPB1O00241 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.34□□□□□ -2.62
SIRPB1O00241 RNU6-719P-201ENST00000516671 104 ntBASIC-1.34□□□□□ -2.62
SIRPB1O00241 MIR124-2-201ENST00000385081 109 ntBASIC-1.35□□□□□ -2.63
SIRPB1O00241 MIRLET7B-201ENST00000385140 83 ntBASIC-1.35□□□□□ -2.63
SIRPB1O00241 FGF7P7-201ENST00000514120 227 ntBASIC-1.35□□□□□ -2.63
SIRPB1O00241 RNU6-65P-201ENST00000516332 98 ntBASIC-1.35□□□□□ -2.63
SIRPB1O00241 AC141273.2-201ENST00000618989 130 ntBASIC-1.35□□□□□ -2.63
SIRPB1O00241 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.36□□□□□ -2.63
SIRPB1O00241 RNU6-816P-201ENST00000390914 107 ntBASIC-1.36□□□□□ -2.63
SIRPB1O00241 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.36□□□□□ -2.63
SIRPB1O00241 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.36□□□□□ -2.63
SIRPB1O00241 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.36□□□□□ -2.63
SIRPB1O00241 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.37□□□□□ -2.63
SIRPB1O00241 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.37□□□□□ -2.63
SIRPB1O00241 RNY4P6-201ENST00000363667 96 ntBASIC-1.37□□□□□ -2.63
SIRPB1O00241 RNU6-151P-201ENST00000364158 107 ntBASIC-1.37□□□□□ -2.63
SIRPB1O00241 RNU6-738P-201ENST00000384531 106 ntBASIC-1.37□□□□□ -2.63
SIRPB1O00241 RNU6-30P-201ENST00000384561 107 ntBASIC-1.37□□□□□ -2.63
SIRPB1O00241 MIR568-201ENST00000385036 95 ntBASIC-1.37□□□□□ -2.63
SIRPB1O00241 RNU6-337P-201ENST00000391243 106 ntBASIC-1.37□□□□□ -2.63
SIRPB1O00241 MIR8485-201ENST00000401372 91 ntBASIC-1.37□□□□□ -2.63
SIRPB1O00241 RNU7-134P-201ENST00000458997 64 ntBASIC-1.37□□□□□ -2.63
SIRPB1O00241 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.37□□□□□ -2.63
SIRPB1O00241 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.37□□□□□ -2.63
SIRPB1O00241 RNA5SP67-201ENST00000516422 131 ntBASIC-1.37□□□□□ -2.63
SIRPB1O00241 MIR4536-1-201ENST00000583537 88 ntBASIC-1.37□□□□□ -2.63
SIRPB1O00241 RNU4-32P-201ENST00000363404 141 ntBASIC-1.38□□□□□ -2.63
SIRPB1O00241 SNORA63-201ENST00000363450 132 ntBASIC-1.38□□□□□ -2.63
SIRPB1O00241 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.38□□□□□ -2.63
SIRPB1O00241 SNORA63.6-201ENST00000364921 119 ntBASIC-1.38□□□□□ -2.63
SIRPB1O00241 MIR513C-201ENST00000401352 84 ntBASIC-1.38□□□□□ -2.63
SIRPB1O00241 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.38□□□□□ -2.63
SIRPB1O00241 AC026421.1-201ENST00000519101 163 ntBASIC-1.38□□□□□ -2.63
SIRPB1O00241 AC025521.1-201ENST00000621624 286 ntBASIC-1.38□□□□□ -2.63
SIRPB1O00241 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.39□□□□□ -2.63
SIRPB1O00241 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.39□□□□□ -2.63
SIRPB1O00241 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.39□□□□□ -2.63
SIRPB1O00241 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.39□□□□□ -2.63
SIRPB1O00241 Y_RNA.812-201ENST00000610788 101 ntBASIC-1.39□□□□□ -2.63
SIRPB1O00241 Y_RNA.784-201ENST00000613803 101 ntBASIC-1.39□□□□□ -2.63
SIRPB1O00241 Y_RNA.787-201ENST00000616522 101 ntBASIC-1.39□□□□□ -2.63
SIRPB1O00241 Y_RNA.780-201ENST00000617336 101 ntBASIC-1.39□□□□□ -2.63
SIRPB1O00241 Y_RNA.801-201ENST00000619005 101 ntBASIC-1.39□□□□□ -2.63
SIRPB1O00241 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.4□□□□□ -2.63
SIRPB1O00241 RNU6-781P-201ENST00000516377 101 ntBASIC-1.4□□□□□ -2.63
SIRPB1O00241 RNA5SP461-201ENST00000516451 104 ntBASIC-1.4□□□□□ -2.63
SIRPB1O00241 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.4□□□□□ -2.63
SIRPB1O00241 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.41□□□□□ -2.64
SIRPB1O00241 Y_RNA.297-201ENST00000364950 91 ntBASIC-1.41□□□□□ -2.64
SIRPB1O00241 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.41□□□□□ -2.64
SIRPB1O00241 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.41□□□□□ -2.64
SIRPB1O00241 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.42□□□□□ -2.64
SIRPB1O00241 HLA-S-202ENST00000425174 53 ntBASIC-1.42□□□□□ -2.64
SIRPB1O00241 SNORD57-201ENST00000448188 72 ntBASIC-1.42□□□□□ -2.64
SIRPB1O00241 Y_RNA.662-201ENST00000516028 97 ntBASIC-1.42□□□□□ -2.64
SIRPB1O00241 RNU6-861P-201ENST00000516745 106 ntBASIC-1.42□□□□□ -2.64
SIRPB1O00241 AP001340.1-201ENST00000624405 217 ntBASIC-1.42□□□□□ -2.64
SIRPB1O00241 SNORD50.2-201ENST00000365465 70 ntBASIC-1.43□□□□□ -2.64
SIRPB1O00241 AL158147.1-201ENST00000443970 75 ntBASIC-1.43□□□□□ -2.64
SIRPB1O00241 snoU13.19-201ENST00000459148 104 ntBASIC-1.43□□□□□ -2.64
SIRPB1O00241 RNU6-479P-201ENST00000516348 105 ntBASIC-1.43□□□□□ -2.64
SIRPB1O00241 AC138207.3-201ENST00000585289 166 ntBASIC-1.43□□□□□ -2.64
SIRPB1O00241 AL118496.2-201ENST00000448300 230 ntBASIC-1.44□□□□□ -2.64
SIRPB1O00241 RNU6-226P-201ENST00000363778 107 ntBASIC-1.45□□□□□ -2.64
SIRPB1O00241 SNORA62.4-201ENST00000365504 151 ntBASIC-1.45□□□□□ -2.64
SIRPB1O00241 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.45□□□□□ -2.64
SIRPB1O00241 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.45□□□□□ -2.64
SIRPB1O00241 RNU7-85P-201ENST00000458851 63 ntBASIC-1.45□□□□□ -2.64
SIRPB1O00241 RNA5SP476-201ENST00000516613 103 ntBASIC-1.45□□□□□ -2.64
SIRPB1O00241 SNORA81.3-201ENST00000517283 198 ntBASIC-1.45□□□□□ -2.64
SIRPB1O00241 MIR4464-201ENST00000580818 92 ntBASIC-1.45□□□□□ -2.64
SIRPB1O00241 MIR4320-201ENST00000636981 65 ntBASIC-1.45□□□□□ -2.64
SIRPB1O00241 AC132825.6-201ENST00000638861 357 ntBASIC-1.45□□□□□ -2.64
SIRPB1O00241 SNORA63.2-201ENST00000362603 126 ntBASIC-1.46□□□□□ -2.64
SIRPB1O00241 MIR577-201ENST00000385196 96 ntBASIC-1.46□□□□□ -2.64
SIRPB1O00241 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.46□□□□□ -2.64
SIRPB1O00241 AC068339.1-201ENST00000526965 141 ntBASIC-1.46□□□□□ -2.64
SIRPB1O00241 MIR5591-201ENST00000578248 65 ntBASIC-1.46□□□□□ -2.64
SIRPB1O00241 AC025166.1-201ENST00000612411 163 ntBASIC-1.46□□□□□ -2.64
SIRPB1O00241 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.46□□□□□ -2.64
SIRPB1O00241 RNU6-208P-201ENST00000362431 107 ntBASIC-1.47□□□□□ -2.64
SIRPB1O00241 RNU6-495P-201ENST00000362995 107 ntBASIC-1.47□□□□□ -2.64
SIRPB1O00241 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.47□□□□□ -2.64
SIRPB1O00241 AL513043.2-201ENST00000573941 143 ntBASIC-1.47□□□□□ -2.64
SIRPB1O00241 MIR6129-201ENST00000616087 109 ntBASIC-1.47□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 260 ms